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Properties
Property Name | Value |
TranscriptId | 628821 |
Track | FilteredModels2 |
ProteinId | 628735 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_5 | supercontig | scaffold_5:1094321..1098118 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2750 ID=mRNA_2750|Name=jgi.p|Nanoce1779_2|628735|organism=Nannochloropsis oceanica|type=mRNA|length=2602bp ACAGAAGGCGGATGCCACGGTTGGGGCCTTCAATGCCGAGGCCCGTGGCC CACCTCCTCCTCGTCTTCCTCCTTGCCACCGGGTTGGAAGCAGCGGACGT CTCGCCACCCAGTTCAGAGCTGACTACGCCAGAGTTCGCCATCGTCCATG CATCTCCACCCCCGCCTCTTCCTTCGGCCGCAGCCGCGACTGATACTCTC CGTCTCGCCCACACCCTCGGCTCCCACATGGTCCTGCAACAAGCCCCTCT CCCCGCATGTCTTTACGGGCAAGGGTCGCCCAAAGCCTTTATCTCAATAG CCTTGGATGGGGCTGCTGTTCCGAGTGCCACCACGGTTGTCGATCCCATG GGGAAATGGGTTGCCTGCCTTCCTCCTCAACAAGCCGGGGGAGCCCATAC CCTCAACATTGCTGGCAGCGGCGGCAACATCACGCTAGAAGACGTGCTTT TCGGAGAGGTCTGGCTGTGTGCAGGGCAGAGCAATATGCAGATGTCCGTG TCGCAAACCTTGAACGCCACTGCCGAAATTGCGGCTTCAGGTCGTGAAAA AAACGGCGGCCCCCGCCTGCGTCTTATGGCCATCGGCCGCAACACCTCTG CTGATCCCCTTGAAGACCTCTCGTCCCCCCCTCTCCTCCCCTGGAGCATC GCCACCCCGTCCAGCGTGGGCGGGGAGGACTGGATGTTTTTCTCGGCCAC TTGCTATTTCTACGGCCTGCATCTAGCGAGCAAAGAAGGTCTTGCCGGGA CGCCCATCGGGCTTATTCAAGCCGCCTACGGATCCACAGAGCTCAAGGCC TGGGCCACTCCCGAGGCTCTCACTGCCTGCCGTTCCACCCCTCCTCCATC CACGCCTACGGTATCGCCGTCAGCAGAGGAGCGAGGAGAGGATGCAAGGG TCACTGGCGAGCACGAGTCCGTGAGTCTCATGCCTGGAGGGTATGATTTG AATGACGACGCATCTCCTTTTGGTGCCGTCCACTTCCGAGATAAGCAGAG CGTCGGGCAGAGGCTCGCATTGAGTGCTCTTGCCAACGTGTACGGGCAAT GGGGTTCCTTGCCTTGGGGTCCTATGGCCAAGGGGATGGAGACAAGTGTG GGAGGGAGGGGGGGAGAACGGGCGAGGATTCAGCCGGTGGAGGGGGTGGA GGTTGTGAGGGGTGGAGGGGATGGAGGGGGAGGGGTCGCGGCGTCTCTGG CTGGCTCAACGGCAGCCGGTGGGAAGGCTGCCGTTCTTGGTGCTACGCTG GCCGTTGATGCCGGCGCAGAGGCCGTTGTTGTAGCCAGAAATGCCACCTC GTCCTTCTTGCCTTTCTCGGTGCTGATAACATATGAAGGGGCAGGGAGCC AGGGCCTGATTGACAGCGGGATAAACCTGTTCGAGCTTGCTTCCACCATT GATGACATTGATACCGAGGGGAAAAGCGTCGTTCCTTCCAGTAGCACCAC CGTGATGGGCGCGAACAATGAAAAGCTGCTGGTTGAGTTTATGTTACCTT TGGACTCGCCCTTGGCGGAGGAGGGGGCAACGCGCGTCTTAAGGTATGCT TTCCGGAACCGACCGTGTCCGGCGACGGTTTTGAAGGTTCCCTACGTGGG CGCGTGGTGTGGGGTCTACAGCACACCTGAAGGACTGCCAGCCTTGCCGT TTGTCCAAGATGTGTGAGTTTGAGGAAGGAGGAAGGAAGGAGGTAACGAT GTGTATTTGACTGGGTGGGTGAGTTAGTTAGGGAGGGGCATGGAGGGGGT AGGGGCGTTGAATCTGTGTGTAAGTGTGACACTCATGCGTGAAGAGAGTG TAAATACATACATAAACCTTTATGGTAAGACTTGAGTGAGATGCCTTGAT TTACACTTAAGCTAAAAGACCACAGGAGAGAATCCGTCAAACGGTCACAC GGTGATCCATCTACCCTATCAAATCGCCTCCACACCTCCACATATATGAA GTTTGATATATTATTAAATTATTCATCACACTTGCTCAATCCCATGCTTT GGTAACATTTTTTGTTAACCCGGCGGGTGTGCCCTGCGCTCAGCGCGTGA TAAATCTGTGTGAGGTGGAGCCGGGGGAGATGTTGGTGTGAGCATGCGAA CAACAGGCATTGAAAGAACCGGTTAAGATGTCTATATATGTATGTTATGA AAACACCTCGACCCACGCATGGGAAAACTGTCATTCCTCATGCCTTCTCC CCTTCTCCCCTTCTCCCTTGGCCCTCCGCGCCCCTGTGTCATGCCCAATC ATCCATATTGCAAATAAATACACGGTACGTTATCCGAAATTTCCACGAGT AGTTTCCATCGCTAGGGACTTCTGATATCAATTGCTAATTCTTTTCTGTA GTTTCCTACAATCCTAACATTATCGCGTGCAACCTGTGCCCGAAAACAAA TGCTTCTCACAAGTGCACAAGTCCGCCACGACAAAGGATTAGCCTTCCAA CAACGAATTGTTGCATATTCCTCCCTTTTTTTGGGCCGGGTTTTACATGG CTTTGACATTTTTTTCCTGTACCAGCAAAGTCCTCGGATGGCCCATACAG GGCTAGGAGGAGGAGGGAGGAAAGAGGAGGTCAGCGGAGAAGCAACTTCT CC back to topprotein sequence of jgi.p|Nanoce1779_2|628735 >mRNA_2750-protein ID=mRNA_2750-protein|Name=jgi.p|Nanoce1779_2|628735|organism=Nannochloropsis oceanica|type=polypeptide|length=552bp MPRLGPSMPRPVAHLLLVFLLATGLEAADVSPPSSELTTPEFAIVHASPP PPLPSAAAATDTLRLAHTLGSHMVLQQAPLPACLYGQGSPKAFISIALDG AAVPSATTVVDPMGKWVACLPPQQAGGAHTLNIAGSGGNITLEDVLFGEV WLCAGQSNMQMSVSQTLNATAEIAASGREKNGGPRLRLMAIGRNTSADPL EDLSSPPLLPWSIATPSSVGGEDWMFFSATCYFYGLHLASKEGLAGTPIG LIQAAYGSTELKAWATPEALTACRSTPPPSTPTVSPSAEERGEDARVTGE HESVSLMPGGYDLNDDASPFGAVHFRDKQSVGQRLALSALANVYGQWGSL PWGPMAKGMETSVGGRGGERARIQPVEGVEVVRGGGDGGGGVAASLAGST AAGGKAAVLGATLAVDAGAEAVVVARNATSSFLPFSVLITYEGAGSQGLI DSGINLFELASTIDDIDTEGKSVVPSSSTTVMGANNEKLLVEFMLPLDSP LAEEGATRVLRYAFRNRPCPATVLKVPYVGAWCGVYSTPEGLPALPFVQD V* back to topmRNA from alignment at scaffold_5:1094321..1098118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2750 ID=mRNA_2750|Name=jgi.p|Nanoce1779_2|628735|organism=Nannochloropsis oceanica|type=mRNA|length=3798bp|location=Sequence derived from alignment at scaffold_5:1094321..1098118- (Nannochloropsis oceanica) ACAGAAGGCGGATGCCACGGTTGGGGCCTTCAATGCCGAGGCCCGTGGCC
CACCTCCTCCTCGTCTTCCTCCTTGCCACCGGGTTGGAAGCAGCGGACGT
CTCGCCACCCAGTTCAGAGCTGACTACGCCAGAGTTCGCCATCGTCCATG
CATCTCCACCCCCGCCTCTTCCTTCGGCCGCAGCCGCGACTGATACTCTC
CGTCTCGCCCACACCCTCGGCTCCCACATGGTCCTGCAACAAGCCCCTCT
CCCCGCATGTCTTTACGGGCAAGGGTCGCCCAAAGCCTTTATCTCAATAG
CCTTGGATGGGGCTGCTGTTCCGAGTGCCACCACGGTTGTCGATCCCATG
GGGAAATGGGTTGCCTGCCTTCCTCCTCAACAAGCCGGGGGAGCCCATAC
CCTCAACATTGCTGGCAGCGGCGGCAACATCACGCTAGAAGACGTGCTTT
TCGGAGAGGTCTGGCTGTGTGCAGGGCAGAGCAATATGCAGATGTCCGTG
TCGCAAACCTTGAACGCCACTGCCGAAATTGCGGCTTCAGGTCGTGAAAA
AAACGGCGGCCCCCGCCTGCGTCTTATGGCCATCGGCCGCAACACCTCTG
CTGATCCCCTTGAAGACCTCTCGTCCCCCCCTCTCCTCCCCTGGAGCATC
GCCACCCCGTCCAGCGTGGGCGGGGAGGACTGGATGTTTTTCTCGGCCAC
TTGCTATTTCTACGGCCTGCATCTAGCGAGCAAAGAAGGTCTTGCCGGGA
CGCCCATCGGGCTTATTCAAGCCGCCTACGGATCCACAGAGCTCAAGGCC
TGGGCCACTCCCGAGGCTCTCACTGCCTGCCGTTCCACCCCTCCTCCATC
CACGCCTACGGTATCGCCGTCAGCAGAGGAGCGAGGAGAGGATGCAAGGG
TCACTGGCGAGCACGAGTCCGTGAGTCTCATGCCTGGAGGTGTGATGCCG
TTACCTGCCATTTCTACCACAAATGTCGATAACACTGGACCTGCAACTGC
TGCTGAGGGCAGTACCACCAGAGCTAGTAGCACCAGTGTCAGCGGCACAA
ACAACACCCAACCCGGGAAGGAGCCTCGGTCCGGTGGCCCTGTGCCCTCG
CTAGTCAGCCCTCCCATCCCCCCTCCTGCTTCTGCTGCTGTTGCTGTTGT
GGCTGGTGCTGCTTCACCTGGTAGTAACCGCCGTTTTCTTCGAGGTCTGG
CCGAACCTGATGATCCAGTAGCAGCAGCAGCAGCCGCAGAAGCAGCAGCA
GCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAACAGAGGCATCGGAAATTTCCTCGGCATTAAGTGATCCGCTCACCC
CTCTCTCCTCCACGGCCTCTGATCCTTCTCCTCTTCCTTCTCCTCCATCT
CCTGCCGCTACTACAGCAGCTGCTCCATCTGGAGGAGCAGGGGCCTGGAC
GCAGGATTGGCATCCGGAGGCCTCCACGTGCTTCAATGCGATGATAAGCC
CGTTGCTTCGCATGACCATGCGAGGCATAATTTGGGATCAGGTATGGAAG
AAGGGAGAGTGCGAGGGAGGGAAGGAGGAAGGGAGGTGTAGGGAAAAATG
TGTCTCCCGGCTTGAGTTTCCTTCCCGACGGTTTGGCTCAATGCCTTTCC
TTCCTCCCTCCCTCCCCCCCTCCCTCCCTCCGCGCCCTCTCTATCCTTCC
CCCCACTAGGGCGAGGAAGACGTGCATGCCCCACCCGAGGACTACCGTTG
CCTCTTCCCCCTCTTCATCCAGTCCTGGAGGCAGCGGTTTGTGTACGCCA
ACGCCCTTGGGCCCATGGCCTTTGGATTCCTCCAGTTGCAGGTAGGAAGA
GAGAGGGGGAGCGAGGAGGGGGACAGAAAGGATGAGTATTCCGACAGTCT
GCGTGTCCACTTTGGATTGTTCTGTGCTTGAAATTCTCGTGTGCGGTATC
GATGAGGGAAAGTGAATACATTTTCTCACGCTCCTTCCTTCGCTCCCTTG
CTTCCTCCCTCCCTCCCTCCCTCCAGGGATACGAGGACGCACATCAAGAC
ATCACAGTCGACGGGGTGGAGGTCGGCAAGATCCGCCTGGCGCAATACAG
CGGCTTGATGGTTCCGAGGACTTTCCTCGCGGTAGGGTATGATTTGAATG
ACGACGCATCTCCTTTTGGTGCCGTCCACTTCCGAGATAAGCAGAGCGTC
GGGCAGAGGCTCGCATTGAGTGCTCTTGCCAACGTGTACGGGCAATGGGG
TTCCTTGCCTTGGGGTCCTATGGCCAAGGGGATGGAGACAAGTGTGGGAG
GGAGGGGGGGAGAACGGGCGAGGATTCAGCCGGTGGAGGGGGTGGAGGTT
GTGAGGGGTGGAGGGGATGGAGGGGGAGGGGTCGCGGCGTCTCTGGCTGG
CTCAACGGCAGCCGGTGGGAAGGCTGCCGTTCTTGGTGCTACGCTGGCCG
TTGATGCCGGCGCAGAGGCCGTTGTTGTAGCCAGAAATGCCACCTCGTCC
TTCTTGCCTTTCTCGGTGCTGATAACATATGAAGGGGCAGGGAGCCAGGG
CCTGATTGACAGCGGGATAAACCTGTTCGAGCTTGCTTCCACCATTGATG
ACATTGATACCGAGGGGAAAAGCGTCGTTCCTTCCAGTAGCACCACCGTG
ATGGGCGCGAACAATGAAAAGCTGCTGGTTGAGTTTATGTTACCTTTGGA
CTCGCCCTTGGCGGAGGAGGGGGCAACGCGCGTCTTAAGGTATGCTTTCC
GGAACCGACCGTGTCCGGCGACGGTTTTGAAGGTTCCCTACGTGGGCGCG
TGGTGTGGGGTCTACAGCACACCTGAAGGACTGCCAGCCTTGCCGTTTGT
CCAAGATGTGTGAGTTTGAGGAAGGAGGAAGGAAGGAGGTAACGATGTGT
ATTTGACTGGGTGGGTGAGTTAGTTAGGGAGGGGCATGGAGGGGGTAGGG
GCGTTGAATCTGTGTGTAAGTGTGACACTCATGCGTGAAGAGAGTGTAAA
TACATACATAAACCTTTATGGTAAGACTTGAGTGAGATGCCTTGATTTAC
ACTTAAGCTAAAAGACCACAGGAGAGAATCCGTCAAACGGTCACACGGTG
ATCCATCTACCCTATCAAATCGCCTCCACACCTCCACATATATGAAGTTT
GATATATTATTAAATTATTCATCACACTTGCTCAATCCCATGCTTTGGTA
ACATTTTTTGTTAACCCGGCGGGTGTGCCCTGCGCTCAGCGCGTGATAAA
TCTGTGTGAGGTGGAGCCGGGGGAGATGTTGGTGTGAGCATGCGAACAAC
AGGCATTGAAAGAACCGGTTAAGATGTCTATATATGTATGTTATGAAAAC
ACCTCGACCCACGCATGGGAAAACTGTCATTCCTCATGCCTTCTCCCCTT
CTCCCCTTCTCCCTTGGCCCTCCGCGCCCCTGTGTCATGCCCAATCATCC
ATATTGCAAATAAATACACGGTACGTTATCCGAAATTTCCACGAGTAGTT
TCCATCGCTAGGGACTTCTGATATCAATTGCTAATTCTTTTCTGTAGTTT
CCTACAATCCTAACATTATCGCGTGCAACCTGTGCCCGAAAACAAATGCT
TCTCACAAGTGCACAAGTCCGCCACGACAAAGGATTAGCCTTCCAACAAC
GAATTGTTGCATATTCCTCCCTTTTTTTGGGCCGGGTTTTACATGGCTTT
GACATTTTTTTCCTGTACCAGCAAAGTCCTCGGATGGCCCATACAGGGCT
AGGAGGAGGAGGGAGGAAAGAGGAGGTCAGCGGAGAAGCAACTTCTCC back to topCoding sequence (CDS) from alignment at scaffold_5:1094321..1098118- >mRNA_2750 ID=mRNA_2750|Name=jgi.p|Nanoce1779_2|628735|organism=Nannochloropsis oceanica|type=CDS|length=3312bp|location=Sequence derived from alignment at scaffold_5:1094321..1098118- (Nannochloropsis oceanica) GGTATGATTTGAATGACGACGCATCTCCTTTTGGTGCCGTCCACTTCCGA GATAAGCAGAGCGTCGGGCAGAGGCTCGCATTGAGTGCTCTTGCCAACGT GTACGGGCAATGGGGTTCCTTGCCTTGGGGTCCTATGGCCAAGGGGATGG AGACAAGTGTGGGAGGGAGGGGGGGAGAACGGGCGAGGATTCAGCCGGTG GAGGGGGTGGAGGTTGTGAGGGGTGGAGGGGATGGAGGGGGAGGGGTCGC GGCGTCTCTGGCTGGCTCAACGGCAGCCGGTGGGAAGGCTGCCGTTCTTG GTGCTACGCTGGCCGTTGATGCCGGCGCAGAGGCCGTTGTTGTAGCCAGA AATGCCACCTCGTCCTTCTTGCCTTTCTCGGTGCTGATAACATATGAAGG GGCAGGGAGCCAGGGCCTGATTGACAGCGGGATAAACCTGTTCGAGCTTG CTTCCACCATTGATGACATTGATACCGAGGGGAAAAGCGTCGTTCCTTCC AGTAGCACCACCGTGATGGGCGCGAACAATGAAAAGCTGCTGGTTGAGTT TATGTTACCTTTGGACTCGCCCTTGGCGGAGGAGGGGGCAACGCGCGTCT TAAGGTATGCTTTCCGGAACCGACCGTGTCCGGCGACGGTTTTGAAGGTT CCCTACGTGGGCGCGTGGTGTGGGGTCTACAGCACACCTGAAGGACTGCC AGCCTTGCCGTTTGTCCAAGATGTGTGAATGCCACGGTTGGGGCCTTCAA TGCCGAGGCCCGTGGCCCACCTCCTCCTCGTCTTCCTCCTTGCCACCGGG TTGGAAGCAGCGGACGTCTCGCCACCCAGTTCAGAGCTGACTACGCCAGA GTTCGCCATCGTCCATGCATCTCCACCCCCGCCTCTTCCTTCGGCCGCAG CCGCGACTGATACTCTCCGTCTCGCCCACACCCTCGGCTCCCACATGGTC CTGCAACAAGCCCCTCTCCCCGCATGTCTTTACGGGCAAGGGTCGCCCAA AGCCTTTATCTCAATAGCCTTGGATGGGGCTGCTGTTCCGAGTGCCACCA CGGTTGTCGATCCCATGGGGAAATGGGTTGCCTGCCTTCCTCCTCAACAA GCCGGGGGAGCCCATACCCTCAACATTGCTGGCAGCGGCGGCAACATCAC GCTAGAAGACGTGCTTTTCGGAGAGGTCTGGCTGTGTGCAGGGCAGAGCA ATATGCAGATGTCCGTGTCGCAAACCTTGAACGCCACTGCCGAAATTGCG GCTTCAGGTCGTGAAAAAAACGGCGGCCCCCGCCTGCGTCTTATGGCCAT CGGCCGCAACACCTCTGCTGATCCCCTTGAAGACCTCTCGTCCCCCCCTC TCCTCCCCTGGAGCATCGCCACCCCGTCCAGCGTGGGCGGGGAGGACTGG ATGTTTTTCTCGGCCACTTGCTATTTCTACGGCCTGCATCTAGCGAGCAA AGAAGGTCTTGCCGGGACGCCCATCGGGCTTATTCAAGCCGCCTACGGAT CCACAGAGCTCAAGGCCTGGGCCACTCCCGAGGCTCTCACTGCCTGCCGT TCCACCCCTCCTCCATCCACGCCTACGGTATCGCCGTCAGCAGAGGAGCG AGGAGAGGATGCAAGGGTCACTGGCGAGCACGAGTCCGTGAGTCTCATGC CTGGAGGGTATGATTTGAATGACGACGCATCTCCTTTTGGTGCCGTCCAC TTCCGAGATAAGCAGAGCGTCGGGCAGAGGCTCGCATTGAGTGCTCTTGC CAACGTGTACGGGCAATGGGGTTCCTTGCCTTGGGGTCCTATGGCCAAGG GGATGGAGACAAGTGTGGGAGGGAGGGGGGGAGAACGGGCGAGGATTCAG CCGGTGGAGGGGGTGGAGGTTGTGAGGGGTGGAGGGGATGGAGGGGGAGG GGTCGCGGCGTCTCTGGCTGGCTCAACGGCAGCCGGTGGGAAGGCTGCCG TTCTTGGTGCTACGCTGGCCGTTGATGCCGGCGCAGAGGCCGTTGTTGTA GCCAGAAATGCCACCTCGTCCTTCTTGCCTTTCTCGGTGCTGATAACATA TGAAGGGGCAGGGAGCCAGGGCCTGATTGACAGCGGGATAAACCTGTTCG AGCTTGCTTCCACCATTGATGACATTGATACCGAGGGGAAAAGCGTCGTT CCTTCCAGTAGCACCACCGTGATGGGCGCGAACAATGAAAAGCTGCTGGT TGAGTTTATGTTACCTTTGGACTCGCCCTTGGCGGAGGAGGGGGCAACGC GCGTCTTAAGGTATGCTTTCCGGAACCGACCGTGTCCGGCGACGGTTTTG AAGGTTCCCTACGTGGGCGCGTGGTGTGGGGTCTACAGCACACCTGAAGG ACTGCCAGCCTTGCCGTTTGTCCAAGATGTGTGAATGCCACGGTTGGGGC CTTCAATGCCGAGGCCCGTGGCCCACCTCCTCCTCGTCTTCCTCCTTGCC ACCGGGTTGGAAGCAGCGGACGTCTCGCCACCCAGTTCAGAGCTGACTAC GCCAGAGTTCGCCATCGTCCATGCATCTCCACCCCCGCCTCTTCCTTCGG CCGCAGCCGCGACTGATACTCTCCGTCTCGCCCACACCCTCGGCTCCCAC ATGGTCCTGCAACAAGCCCCTCTCCCCGCATGTCTTTACGGGCAAGGGTC GCCCAAAGCCTTTATCTCAATAGCCTTGGATGGGGCTGCTGTTCCGAGTG CCACCACGGTTGTCGATCCCATGGGGAAATGGGTTGCCTGCCTTCCTCCT CAACAAGCCGGGGGAGCCCATACCCTCAACATTGCTGGCAGCGGCGGCAA CATCACGCTAGAAGACGTGCTTTTCGGAGAGGTCTGGCTGTGTGCAGGGC AGAGCAATATGCAGATGTCCGTGTCGCAAACCTTGAACGCCACTGCCGAA ATTGCGGCTTCAGGTCGTGAAAAAAACGGCGGCCCCCGCCTGCGTCTTAT GGCCATCGGCCGCAACACCTCTGCTGATCCCCTTGAAGACCTCTCGTCCC CCCCTCTCCTCCCCTGGAGCATCGCCACCCCGTCCAGCGTGGGCGGGGAG GACTGGATGTTTTTCTCGGCCACTTGCTATTTCTACGGCCTGCATCTAGC GAGCAAAGAAGGTCTTGCCGGGACGCCCATCGGGCTTATTCAAGCCGCCT ACGGATCCACAGAGCTCAAGGCCTGGGCCACTCCCGAGGCTCTCACTGCC TGCCGTTCCACCCCTCCTCCATCCACGCCTACGGTATCGCCGTCAGCAGA GGAGCGAGGAGAGGATGCAAGGGTCACTGGCGAGCACGAGTCCGTGAGTC TCATGCCTGGAG back to top
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