Properties
| Property Name | Value |
|---|
| TranscriptId | 525481 |
| Track | FilteredModels2 |
| ProteinId | 525395 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1048240..1049920 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2731 ID=mRNA_2731|Name=jgi.p|Nanoce1779_2|525395|organism=Nannochloropsis oceanica|type=mRNA|length=1464bp
ATGTTTTATATCCACCTGCCTCGGCGTACCTCCTCATTCATCACTTCTGA
CTTGTCTTTTGCCCCCTACTGCCCACTTCAGGGTCAACCCCTTCCCCAGC
TGACTAAGCTTGGCACGACCACCGTCACCACCACTCCTCGTGCTTCCGCT
TTTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCACCCCCTCCTCATCCTCTCTCCTCTCGCCTGCC
TGGACCATGACATCCCCGGACATTTCGAACGTCCTGCCCGTGTCATCTCC
ATCCTGAACGCTCTCAAGCAATACGCGCCCCCTCTCTCCCTTCCTCCCAC
CTCTGGCGCTCCCCCCCTCCTTCCTCCCTCCGCCTTCCTTCTCTCCAATG
ATGATTCCCCCCTCGCTACGCGCGAGCAATTGACAAGGTTCCACTCTCTA
CAGCACATTGAAACTCTCTTCTCCCTGTTTGCGCGATCCAAAGCCGCTGG
AGGGAAGGAGGGAGGGAGGGCCAGGCGGGCCAGTGAACGTGTCGGGCCTA
AGAATTACAATGACAATGCCATCTTGGACATAGATGCGGACACTTTCGTG
TGCCCTGGCACGGAGGAAGCGGCCTTGCGCGCAGCGGGAGCAGCGTGTAG
GGGCGTCGATGAAGTCCTTGAGGGGAGGGCCGAAACGGTTTTCTGTGTTG
TTCGTCCCCCCGGCCACCATGCGACACCTGACAGGGCCATGGGATTTTGT
TTCTTCAACAATGTAGGCGTGGCGGCCATGCATGCACGGGCGAAGCACGG
GGTGAAACGGGTGGCGATCTTGGATCCAGACGTGCACCATGGCAACGGCA
CGCAGGATTTCACCGTCCTCGATCCGGATCTTTTTTATGCCTCTACGCAC
GTCGGCTACGGCTTCTACCCCGGTAGCGGGCACAAGGAGGAGGAGGAAGG
GAGGGAAGGTAGGCTCGTGAATGTACCTTTCAGGGAAGGGGAGGGGAGCA
GCCAGCGCTTTAGGCAGGCGTGGGAGAAGGAGATTTTCCCCACGTTGAAG
GCGTTTGAGCCGGAGTTGATCTTAATGTCGATGGGCTTCGACGCGGCGAG
GGAGGACCCGCTGGGGGAGATGGAGCTGGAGGCGAAGGATTACTGGTGGT
TGACACGTGGCGTGATGGAGGTGGCGAGGGAGGGGGGGAAGGAGGGGGAG
GGGGAGGGGGAGGGGAGGAAATGTAAGGTGTTGTCGGTGTTGGAGGGAGG
TTACCACCTGGGGGCGCTGGGGCTGTGTGGAGTAGCCCATGTGAAGGCTT
TACTGGGCTTGCCGTTTGACGAGGGAGCGGGGGAGGAGACGGGGGAGGAG
GAGGAGCCGTTGGAGGCGTTGCACTTGTTGCCGCCAGTGGTGGATAGGGA
GGAGGAGGAGCTGCTGGAGCGGATGGCGGGGGTGTCGTTGGACGGGGGGA
AGGAGAGGGGGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|525395 >mRNA_2731-protein ID=mRNA_2731-protein|Name=jgi.p|Nanoce1779_2|525395|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MFYIHLPRRTSSFITSDLSFAPYCPLQGQPLPQLTKLGTTTVTTTPRASA
FPPPPPPPPPPPPPPPPPPPPPHPLLILSPLACLDHDIPGHFERPARVIS
ILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSL
QHIETLFSLFARSKAAGGKEGGRARRASERVGPKNYNDNAILDIDADTFV
CPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFC
FFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTH
VGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLK
AFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVAREGGKEGE
GEGEGRKCKVLSVLEGGYHLGALGLCGVAHVKALLGLPFDEGAGEETGEE
EEPLEALHLLPPVVDREEEELLERMAGVSLDGGKERG* back to topmRNA from alignment at scaffold_5:1048240..1049920- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2731 ID=mRNA_2731|Name=jgi.p|Nanoce1779_2|525395|organism=Nannochloropsis oceanica|type=mRNA|length=1681bp|location=Sequence derived from alignment at scaffold_5:1048240..1049920- (Nannochloropsis oceanica)
ATGTTTTATATCCACCTGCCTCGGCGTACCTCCTCATTCATCACTTCTGA
CTTGTCTTTTGCCCCCTACTGCCCACTTCAGGGTCAACCCCTTCCCCAGC
TGACTAAGCTTGGCACGACCACCGTCACCACCACTCCTCGTGCTTCCGCT
TTTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCACCCCCTCCTCATCCTCTCTCCTCTCGCCTGCC
TGGACCATGACATCCCCGGACATTTCGAACGTCCTGCCCGTGTCATCTCC
ATCCTGAACGCTCTCAAGCAATACGCGCCCCCTCTCTCCCTTCCTCCCAC
CTCTGGCGCTCCCCCCCTCCTTCCTCCCTCCGCCTTCCTTCTCTCCAATG
ATGATTCCCCCCTCGCTACGCGCGAGCAATTGACAAGGTTCCACTCTCTA
CAGCACATTGAAACTCTCTTCTCCCTGTTTGCGCGATCCAAAGCCGCTGT
GGAAGATGAAGGAGAAGAGGACGGCGAGGAAGGGGGGAAGAAGGGAGGGA
AGGAGGGAGGGAGGGCCAGGCGGGCCAGTGAACGTGTCGGGCCTAAGAAT
TACAATGACAATGCCATCTTGGACATAGATGCGGACACTTTCGTGTGCCC
TGGCACGGAGGAAGCGGCCTTGCGCGCAGCGGGAGCAGCGTGTAGGGGCG
TCGATGAAGTCCTTGAGGGGAGGGCCGAAACGGTTTTCTGTGTTGTTCGT
CCCCCCGGCCACCATGCGACACCTGACAGGGCCATGGGATTTTGTTTCTT
CAACAATGTAGGCGTGGCGGCCATGCATGCACGGGCGAAGCACGGGGTGA
AACGGGTGGCGATCTTGGATCCAGGTACAAACAATCAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAATGGGATAGCCACATGTGACCGCGACCACGG
ATTTACACGTCGCACCATTGACTCTTCCCTCCTTCCTATTTTTCTTCCTC
TCTTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCGCTTTCTAGACGT
GCACCATGGCAACGGCACGCAGGATTTCACCGTCCTCGATCCGGATCTTT
TTTATGCCTCTACGCACGTCGGCTACGGCTTCTACCCCGGTAGCGGGCAC
AAGGAGGAGGAGGAAGGGAGGGAAGGTAGGCTCGTGAATGTACCTTTCAG
GGAAGGGGAGGGGAGCAGCCAGCGCTTTAGGCAGGCGTGGGAGAAGGAGA
TTTTCCCCACGTTGAAGGCGTTTGAGCCGGAGTTGATCTTAATGTCGATG
GGCTTCGACGCGGCGAGGGAGGACCCGCTGGGGGAGATGGAGCTGGAGGC
GAAGGATTACTGGTGGTTGACACGTGGCGTGATGGAGGTGGCGAGGGAGG
GGGGGAAGGAGGGGGAGGGGGAGGGGGAGGGGAGGAAATGTAAGGTGTTG
TCGGTGTTGGAGGGAGGTTACCACCTGGGGGCGCTGGGGCTGTGTGGAGT
AGCCCATGTGAAGGCTTTACTGGGCTTGCCGTTTGACGAGGGAGCGGGGG
AGGAGACGGGGGAGGAGGAGGAGCCGTTGGAGGCGTTGCACTTGTTGCCG
CCAGTGGTGGATAGGGAGGAGGAGGAGCTGCTGGAGCGGATGGCGGGGGT
GTCGTTGGACGGGGGGAAGGAGAGGGGGTGA back to topCoding sequence (CDS) from alignment at scaffold_5:1048240..1049920- >mRNA_2731 ID=mRNA_2731|Name=jgi.p|Nanoce1779_2|525395|organism=Nannochloropsis oceanica|type=CDS|length=4392bp|location=Sequence derived from alignment at scaffold_5:1048240..1049920- (Nannochloropsis oceanica)
ACGTGCACCATGGCAACGGCACGCAGGATTTCACCGTCCTCGATCCGGAT
CTTTTTTATGCCTCTACGCACGTCGGCTACGGCTTCTACCCCGGTAGCGG
GCACAAGGAGGAGGAGGAAGGGAGGGAAGGTAGGCTCGTGAATGTACCTT
TCAGGGAAGGGGAGGGGAGCAGCCAGCGCTTTAGGCAGGCGTGGGAGAAG
GAGATTTTCCCCACGTTGAAGGCGTTTGAGCCGGAGTTGATCTTAATGTC
GATGGGCTTCGACGCGGCGAGGGAGGACCCGCTGGGGGAGATGGAGCTGG
AGGCGAAGGATTACTGGTGGTTGACACGTGGCGTGATGGAGGTGGCGAGG
GAGGGGGGGAAGGAGGGGGAGGGGGAGGGGGAGGGGAGGAAATGTAAGGT
GTTGTCGGTGTTGGAGGGAGGTTACCACCTGGGGGCGCTGGGGCTGTGTG
GAGTAGCCCATGTGAAGGCTTTACTGGGCTTGCCGTTTGACGAGGGAGCG
GGGGAGGAGACGGGGGAGGAGGAGGAGCCGTTGGAGGCGTTGCACTTGTT
GCCGCCAGTGGTGGATAGGGAGGAGGAGGAGCTGCTGGAGCGGATGGCGG
GGGTGTCGTTGGACGGGGGGAAGGAGAGGGGGTGAGGAGGGAAGGAGGGA
GGGAGGGCCAGGCGGGCCAGTGAACGTGTCGGGCCTAAGAATTACAATGA
CAATGCCATCTTGGACATAGATGCGGACACTTTCGTGTGCCCTGGCACGG
AGGAAGCGGCCTTGCGCGCAGCGGGAGCAGCGTGTAGGGGCGTCGATGAA
GTCCTTGAGGGGAGGGCCGAAACGGTTTTCTGTGTTGTTCGTCCCCCCGG
CCACCATGCGACACCTGACAGGGCCATGGGATTTTGTTTCTTCAACAATG
TAGGCGTGGCGGCCATGCATGCACGGGCGAAGCACGGGGTGAAACGGGTG
GCGATCTTGGATCCAGATGTTTTATATCCACCTGCCTCGGCGTACCTCCT
CATTCATCACTTCTGACTTGTCTTTTGCCCCCTACTGCCCACTTCAGGGT
CAACCCCTTCCCCAGCTGACTAAGCTTGGCACGACCACCGTCACCACCAC
TCCTCGTGCTTCCGCTTTTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACCCCCTCCTCATCCTC
TCTCCTCTCGCCTGCCTGGACCATGACATCCCCGGACATTTCGAACGTCC
TGCCCGTGTCATCTCCATCCTGAACGCTCTCAAGCAATACGCGCCCCCTC
TCTCCCTTCCTCCCACCTCTGGCGCTCCCCCCCTCCTTCCTCCCTCCGCC
TTCCTTCTCTCCAATGATGATTCCCCCCTCGCTACGCGCGAGCAATTGAC
AAGGTTCCACTCTCTACAGCACATTGAAACTCTCTTCTCCCTGTTTGCGC
GATCCAAAGCCGCTACGTGCACCATGGCAACGGCACGCAGGATTTCACCG
TCCTCGATCCGGATCTTTTTTATGCCTCTACGCACGTCGGCTACGGCTTC
TACCCCGGTAGCGGGCACAAGGAGGAGGAGGAAGGGAGGGAAGGTAGGCT
CGTGAATGTACCTTTCAGGGAAGGGGAGGGGAGCAGCCAGCGCTTTAGGC
AGGCGTGGGAGAAGGAGATTTTCCCCACGTTGAAGGCGTTTGAGCCGGAG
TTGATCTTAATGTCGATGGGCTTCGACGCGGCGAGGGAGGACCCGCTGGG
GGAGATGGAGCTGGAGGCGAAGGATTACTGGTGGTTGACACGTGGCGTGA
TGGAGGTGGCGAGGGAGGGGGGGAAGGAGGGGGAGGGGGAGGGGGAGGGG
AGGAAATGTAAGGTGTTGTCGGTGTTGGAGGGAGGTTACCACCTGGGGGC
GCTGGGGCTGTGTGGAGTAGCCCATGTGAAGGCTTTACTGGGCTTGCCGT
TTGACGAGGGAGCGGGGGAGGAGACGGGGGAGGAGGAGGAGCCGTTGGAG
GCGTTGCACTTGTTGCCGCCAGTGGTGGATAGGGAGGAGGAGGAGCTGCT
GGAGCGGATGGCGGGGGTGTCGTTGGACGGGGGGAAGGAGAGGGGGTGAG
GAGGGAAGGAGGGAGGGAGGGCCAGGCGGGCCAGTGAACGTGTCGGGCCT
AAGAATTACAATGACAATGCCATCTTGGACATAGATGCGGACACTTTCGT
GTGCCCTGGCACGGAGGAAGCGGCCTTGCGCGCAGCGGGAGCAGCGTGTA
GGGGCGTCGATGAAGTCCTTGAGGGGAGGGCCGAAACGGTTTTCTGTGTT
GTTCGTCCCCCCGGCCACCATGCGACACCTGACAGGGCCATGGGATTTTG
TTTCTTCAACAATGTAGGCGTGGCGGCCATGCATGCACGGGCGAAGCACG
GGGTGAAACGGGTGGCGATCTTGGATCCAGATGTTTTATATCCACCTGCC
TCGGCGTACCTCCTCATTCATCACTTCTGACTTGTCTTTTGCCCCCTACT
GCCCACTTCAGGGTCAACCCCTTCCCCAGCTGACTAAGCTTGGCACGACC
ACCGTCACCACCACTCCTCGTGCTTCCGCTTTTCCTCCCCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACC
CCCTCCTCATCCTCTCTCCTCTCGCCTGCCTGGACCATGACATCCCCGGA
CATTTCGAACGTCCTGCCCGTGTCATCTCCATCCTGAACGCTCTCAAGCA
ATACGCGCCCCCTCTCTCCCTTCCTCCCACCTCTGGCGCTCCCCCCCTCC
TTCCTCCCTCCGCCTTCCTTCTCTCCAATGATGATTCCCCCCTCGCTACG
CGCGAGCAATTGACAAGGTTCCACTCTCTACAGCACATTGAAACTCTCTT
CTCCCTGTTTGCGCGATCCAAAGCCGCTACGTGCACCATGGCAACGGCAC
GCAGGATTTCACCGTCCTCGATCCGGATCTTTTTTATGCCTCTACGCACG
TCGGCTACGGCTTCTACCCCGGTAGCGGGCACAAGGAGGAGGAGGAAGGG
AGGGAAGGTAGGCTCGTGAATGTACCTTTCAGGGAAGGGGAGGGGAGCAG
CCAGCGCTTTAGGCAGGCGTGGGAGAAGGAGATTTTCCCCACGTTGAAGG
CGTTTGAGCCGGAGTTGATCTTAATGTCGATGGGCTTCGACGCGGCGAGG
GAGGACCCGCTGGGGGAGATGGAGCTGGAGGCGAAGGATTACTGGTGGTT
GACACGTGGCGTGATGGAGGTGGCGAGGGAGGGGGGGAAGGAGGGGGAGG
GGGAGGGGGAGGGGAGGAAATGTAAGGTGTTGTCGGTGTTGGAGGGAGGT
TACCACCTGGGGGCGCTGGGGCTGTGTGGAGTAGCCCATGTGAAGGCTTT
ACTGGGCTTGCCGTTTGACGAGGGAGCGGGGGAGGAGACGGGGGAGGAGG
AGGAGCCGTTGGAGGCGTTGCACTTGTTGCCGCCAGTGGTGGATAGGGAG
GAGGAGGAGCTGCTGGAGCGGATGGCGGGGGTGTCGTTGGACGGGGGGAA
GGAGAGGGGGTGAGGAGGGAAGGAGGGAGGGAGGGCCAGGCGGGCCAGTG
AACGTGTCGGGCCTAAGAATTACAATGACAATGCCATCTTGGACATAGAT
GCGGACACTTTCGTGTGCCCTGGCACGGAGGAAGCGGCCTTGCGCGCAGC
GGGAGCAGCGTGTAGGGGCGTCGATGAAGTCCTTGAGGGGAGGGCCGAAA
CGGTTTTCTGTGTTGTTCGTCCCCCCGGCCACCATGCGACACCTGACAGG
GCCATGGGATTTTGTTTCTTCAACAATGTAGGCGTGGCGGCCATGCATGC
ACGGGCGAAGCACGGGGTGAAACGGGTGGCGATCTTGGATCCAGATGTTT
TATATCCACCTGCCTCGGCGTACCTCCTCATTCATCACTTCTGACTTGTC
TTTTGCCCCCTACTGCCCACTTCAGGGTCAACCCCTTCCCCAGCTGACTA
AGCTTGGCACGACCACCGTCACCACCACTCCTCGTGCTTCCGCTTTTCCT
CCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCACCCCCTCCTCATCCTCTCTCCTCTCGCCTGCCTGGACC
ATGACATCCCCGGACATTTCGAACGTCCTGCCCGTGTCATCTCCATCCTG
AACGCTCTCAAGCAATACGCGCCCCCTCTCTCCCTTCCTCCCACCTCTGG
CGCTCCCCCCCTCCTTCCTCCCTCCGCCTTCCTTCTCTCCAATGATGATT
CCCCCCTCGCTACGCGCGAGCAATTGACAAGGTTCCACTCTCTACAGCAC
ATTGAAACTCTCTTCTCCCTGTTTGCGCGATCCAAAGCCGCT back to top
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