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Properties
| Property Name | Value |
|---|
| TranscriptId | 581388 |
| Track | FilteredModels2 |
| ProteinId | 581302 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1030987..1034752 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2723 ID=mRNA_2723|Name=jgi.p|Nanoce1779_2|581302|organism=Nannochloropsis oceanica|type=mRNA|length=3261bp
ACAGAGAGCAGCAACCCACTAATCACGCGGACTGTCTCCCACCGGCGTCG
TCCCCCTCCGAACGACAGAGCAACCAGCATCATTCGGAGCCTTTACTTAT
GTCGTTCACATCGATACTACGGACCATCATATTTAACTTGGGCGCCCTGG
CGGTGGCATACGTCCTCCTTCTGAGTGGTGTGCACAAATTTACGTACAAG
CTTTGGCGCGTCGAGCTCTCCCAAGGTCTCTACCGCTCCCTCAACAAGTC
CTACCTCCTGGCGACCGAGCAGGCCTACAAACACATCGACGCCTTTTTTG
CCTCCCACCCGTCTCTCCCTCCCGCCCTCCCGCGCTACCATGCCTCAACC
ATTAAGGCCTTCGTTGGAGTGTTTGAATTACTGCTGGCTTTTCTCTGGCT
GACGCGACGCTGGCGGGCCGCGGCATGGGGAAGCGCGTTGTGCTTTGCCT
CGTGGATGGCCATTGCGTGGTCAGATTTCTTGCCGGACTCGGCGGGGGGG
GAGGAAGGCATGTCATTCGCCTTATTCTTCTTCGGCTTGTCGCTGGGCTT
GCTATTTACCGGGCCGAGGAGTGGCAAGAATATTGGAGGGGACGTGGCGA
GGGAAGGTGCAGGCGGCGCCTCATCGAAGAAGCAGAGATGAAAGAAAGGG
ATGAAAGGGATAGGGATAGAGAGATGTGAGGAAATGAAACTAAAAAGTAT
GTAAAGTAAAAGTAAAGAAAGGGGAATGATAGGACGGAGGGAATGCGTTG
ACTTGAGCACCAAGAAAACTTCTCCCTACTTTGTCCTCCTCCACAGGATA
TGCACCAAGTGACGACAAAGACGTGGTCATGGATAATACTTTCTTTTGTA
CTACCTACCATGCTGCCTTTGCAAATTGTTCGTTTTGGGGACTCAGCAGA
TGACGAGGACGAAAGGCTATATCGCAAATTATTATCTCCTTGGTCACTTG
TCTGCACAACTGCTTTCGCGGCGGTGGCCTGAGAGCTTCATTACTTCACC
TTAATATACCGAAGCAGGGAAAGTATGCAGTACACCTCTACAAAGTCGGT
CTCAATTTACTGCAAGGACTCCATGCCCTGCATTCCTCCACTTTTTTTTT
TCTTTCAAGAGGGGACAAGGACGAGGGGGGAGGTCACCGACGAGGATGTC
GCTACTTCCCCCTCCAATCGCATCCGTGCCTCCATGATGCTTCACAATCA
TCCAGTATTCAGTCCAAAATCTGTTGGTCGCCCAATTTTATACTTTTACG
CCTTAAAAGCGCACCTAAACCAATGCAAGGTACCCTTTTCCACTCTCGCT
GCCATCATCGCCAACATCCAGAATTCTTCGAAGCAGTCCGTGCTCTTTCC
TACATGCCCGATCAACCCCACACACACAGCCATCATCCACCACCCTACAA
ACTCCCATGCATATAGACATAAAAATGGCGGGGGCAGATACAATGGACAT
CTCCCCAGGCAGCGGGGTGGAGGAGACCAAAACGTCGGGAGAGTCCAAAC
GCCAAACTACGACGAATGCCAACGCGGCGATGGTACGTTTTCAGGCTGTG
TTTTTCAGTACATGCATCGAGGTTGTATGTCCTGAGTGTTGCGGAAGCTT
TTTGTGAAAGTGATCAGTGTTTTAGGAATGATGCCTGTACTTTTTGGGGG
CTCTGCTTTGGCCGGCTCTCTGTCTCTCTTCTTTCGCCTTTCCTTCAGAC
GTAGCCCCGGCGTTTTCATCATCTCTCTGCACCTGCTGTCTGCAAGCAAG
CCTAGCTCCTGAGCATTTTCAGCCTGCACAGGCTCGCGTGTCTCTTTCTG
TCTTCGTGCTCCTGCCACGTTCCATTTCTTGGTGTCAAGTCTTTGTAAGG
TCACACTTACGCACCTCTTCTCCCTTCCATCCCTTTTCCCACCTCAACCA
GGAGGAAGAAGAAAGCAAGCCCGACCCCCTCAAGGAAGCTCTGGAGGCGG
CCGAGGAACAAGCGCAGACGCACCCTGCGCAAGCCATCGCCGCTTTCCAT
GATGTCCTCCACACCCCCAACCGGGACGATGAAGTCGCCCAACGCATCAA
GGAAGAAGCCATCTACCGCCTGGCCAAACTGCATGCCGACGCCCACGGCT
TCCGCGAAGTCATGGCCCTGCTCAAGGATAGTAATGACTATTTTGCCCTG
GTTCCCAAGGCCAAGACAGCGAAGATCGTGAGGACAATAATCGATATTGT
CACTAAGGTTCCCAACTCGGTGGACCTGCAGGTGGAGCTGTGCAAGGAGG
TCGTCGCTTGGTGCATCGCCCAGAAACGGACCTTCCTGCGTCAACGCATC
GAGTCCCGACTCGCAGCCCTCCTCTTCCTCCGCGGGGATTACACGGACGC
CCTCTCCCTGATCAATAAACTTTTGCGCGAACTCAAAAAATTCGACGACA
AGCAATTGCTTGTGGAGACCCACCTGATCGAGGCGCGCATTGACCACGCC
TTGCGCAACCTTCCCAAGGCCAAGGCCGCCCTGACCGCGGCCCGTACGGC
AGGTAACTCCATCTACGTCGTCCCTGCTATGCAAGCCGAGCTGGACCAGA
TGTCGGGTGTGCTGCACTGCGAGGAAGGTGACTACAAGACGTCCCATTCC
TATTTCCTGGAGGCATTTGAGGCCTTCGATTCCTTGTCGGATCCTCGCGC
ACGCAAGTGCCTGGAGTACATGATGCTGTGCTCCATCTTGCAAGGAACGC
CCCAGGAGGTGTCGGCAGTGACGAGCAAGCACGGGCTGAAATACGCGGGG
GAGGGAATGAGTGCTCTAGTGGCGATAGCGGCCGCGGCGAAGGCGCGAAG
TTTGGAGCTATTCGACGGGGCAAGGGAGGAATATGGGGGGGTGTTGGCGG
GGGATTTGTTGATGAAGCACCACGTGCACATCGTGTATGAGCAGCTGCTG
GAGTCGAATCTGTTGAAGATTATTGAGCCCTTTTCGTGCGTGGAGATAAG
TCATGTGGCGTCTCTCATCAACCTGCCGGAGAAGACGGTGGAAAAGAAGT
TGTCGCAGATGATTCTGGATGACAAGATATTGGGGACGTTGGACCAGGGG
CAGGGGCAGCTGCTGGTGTATGAGGGTAGTGGCTTGGATAAGACGTACAC
GCATGGGTTGGAGGTGATTGGAAATTTGGGGATGGTTGTGGACAGCTTGT
TCAGGCGGGCGCAGAAAATGTTGCACTCAGGGCATGTGGTGGGAGGGGTG
GGAGGAAGTGGGGAAGGGCCGGTGGAGAGTGCGTAAGATTGAAGAGGGTT
TTTGTAGGGAC back to topprotein sequence of jgi.p|Nanoce1779_2|581302 >mRNA_2723-protein ID=mRNA_2723-protein|Name=jgi.p|Nanoce1779_2|581302|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVDLQVELCKEVVAW
CIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLL
VETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGV
LHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEV
SAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLL
MKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQM
ILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRA
QKMLHSGHVVGGVGGSGEGPVESA* back to topmRNA from alignment at scaffold_5:1030987..1034752- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2723 ID=mRNA_2723|Name=jgi.p|Nanoce1779_2|581302|organism=Nannochloropsis oceanica|type=mRNA|length=3766bp|location=Sequence derived from alignment at scaffold_5:1030987..1034752- (Nannochloropsis oceanica)
ACAGAGAGCAGCAACCCACTAATCACGCGGACTGTCTCCCACCGGCGTCG
TCCCCCTCCGAACGACAGAGCAACCAGCATCATTCGGAGCCTTTACTTAT
GTCGTTCACATCGATACTACGGACCATCATATTTAACTTGGGCGCCCTGG
CGGTGGCATACGTCCTCCTTCTGAGTGGTGTGCACAAATTTACGTACAAG
GTACGTTGAAAGGAAGGAGCGCGGACAGCAGGGAGGATGAGACCGAAGGG
ACTTGGCGGGGCGCGACCTGGTGCTACGTCGAAGGGTCTTGCTCATGGCC
TTGGCGCTGAACAAGGTCCGCACTGGTCAAGGACGAATATGGGGGAGGAA
GGAGAGGCTTAAGGAGGACTCATAATGTCCGCCAGACAAGCCTTGACATT
CCTATTCGAACCATTTTCCCAGTCAATGCACAGATATAAATGTATTCTTT
CCATCCACCCCTTCCTTCTTTTCATTTTCTTGCTTTCGCCATTCACTCAT
CCGCTGCATCCCGTCACCGTGTACCTATTATAGCTTTGGCGCGTCGAGCT
CTCCCAAGGTCTCTACCGCTCCCTCAACAAGTCCTACCTCCTGGCGACCG
AGCAGGCCTACAAACACATCGACGCCTTTTTTGCCTCCCACCCGTCTCTC
CCTCCCGCCCTCCCGCGCTACCATGCCTCAACCATTAAGGCCTTCGTTGG
AGTGTTTGAATTACTGCTGGCTTTTCTCTGGCTGACGCGACGCTGGCGGG
CCGCGGCATGGGGAAGCGCGTTGTGCTTTGCCTCGTGGATGGCCATTGCG
TGGTCAGATTTCTTGCCGGACTCGGCGGGGGGGGAGGAAGGCATGTCATT
CGCCTTATTCTTCTTCGGCTTGTCGCTGGGCTTGCTATTTACCGGGCCGA
GGAGTGGCAAGAATATTGGAGGGGACGTGGCGAGGGAAGGTGCAGGCGGC
GCCTCATCGAAGAAGCAGAGATGAAAGAAAGGGATGAAAGGGATAGGGAT
AGAGAGATGTGAGGAAATGAAACTAAAAAGTATGTAAAGTAAAAGTAAAG
AAAGGGGAATGATAGGACGGAGGGAATGCGTTGACTTGAGCACCAAGAAA
ACTTCTCCCTACTTTGTCCTCCTCCACAGGATATGCACCAAGTGACGACA
AAGACGTGGTCATGGATAATACTTTCTTTTGTACTACCTACCATGCTGCC
TTTGCAAATTGTTCGTTTTGGGGACTCAGCAGATGACGAGGACGAAAGGC
TATATCGCAAATTATTATCTCCTTGGTCACTTGTCTGCACAACTGCTTTC
GCGGCGGTGGCCTGAGAGCTTCATTACTTCACCTTAATATACCGAAGCAG
GGAAAGTATGCAGTACACCTCTACAAAGTCGGTCTCAATTTACTGCAAGG
ACTCCATGCCCTGCATTCCTCCACTTTTTTTTTTCTTTCAAGAGGGGACA
AGGACGAGGGGGGAGGTCACCGACGAGGATGTCGCTACTTCCCCCTCCAA
TCGCATCCGTGCCTCCATGATGCTTCACAATCATCCAGTATTCAGTCCAA
AATCTGTTGGTCGCCCAATTTTATACTTTTACGCCTTAAAAGCGCACCTA
AACCAATGCAAGGTACCCTTTTCCACTCTCGCTGCCATCATCGCCAACAT
CCAGAATTCTTCGAAGCAGTCCGTGCTCTTTCCTACATGCCCGATCAACC
CCACACACACAGCCATCATCCACCACCCTACAAACTCCCATGCATATAGA
CATAAAAATGGCGGGGGCAGATACAATGGACATCTCCCCAGGCAGCGGGG
TGGAGGAGACCAAAACGTCGGGAGAGTCCAAACGCCAAACTACGACGAAT
GCCAACGCGGCGATGGTACGTTTTCAGGCTGTGTTTTTCAGTACATGCAT
CGAGGTTGTATGTCCTGAGTGTTGCGGAAGCTTTTTGTGAAAGTGATCAG
TGTTTTAGGAATGATGCCTGTACTTTTTGGGGGCTCTGCTTTGGCCGGCT
CTCTGTCTCTCTTCTTTCGCCTTTCCTTCAGACGTAGCCCCGGCGTTTTC
ATCATCTCTCTGCACCTGCTGTCTGCAAGCAAGCCTAGCTCCTGAGCATT
TTCAGCCTGCACAGGCTCGCGTGTCTCTTTCTGTCTTCGTGCTCCTGCCA
CGTTCCATTTCTTGGTGTCAAGTCTTTGTAAGGTCACACTTACGCACCTC
TTCTCCCTTCCATCCCTTTTCCCACCTCAACCAGGAGGAAGAAGAAAGCA
AGCCCGACCCCCTCAAGGAAGCTCTGGAGGCGGCCGAGGAACAAGCGCAG
ACGCACCCTGCGCAAGCCATCGCCGCTTTCCATGATGTCCTCCACACCCC
CAACCGGGACGATGAAGTCGCCCAACGCATCAAGGAAGAAGCCATCTACC
GCCTGGCCAAACTGCATGCCGACGCCCACGGCTTCCGCGAAGTCATGGCC
CTGCTCAAGGATAGTAATGACTATTTTGCCCTGGTTCCCAAGGCCAAGAC
AGCGAAGATCGTGAGGACAATAATCGATATTGTCACTAAGGTTCCCAACT
CGGTGGACCTGCAGGTGGAGCTGTGCAAGGAGGTAAGCGAAGGAAGGAGG
AAGGAATGTGGAGGGGATGGATGGGCGTGGGGATAATGCTGTGGATGACT
ACCATCAGCGATATCAGATTGAGATATCATAAGGTGAAAATCGTTAAGGT
GGGTGCACGCTCATCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTTT
TTAGGTCGTCGCTTGGTGCATCGCCCAGAAACGGACCTTCCTGCGTCAAC
GCATCGAGTCCCGACTCGCAGCCCTCCTCTTCCTCCGCGGGGATTACACG
GACGCCCTCTCCCTGATCAATAAACTTTTGCGCGAACTCAAAAAATTCGA
CGACAAGCAATTGCTTGTGGAGACCCACCTGATCGAGGCGCGCATTGACC
ACGCCTTGCGCAACCTTCCCAAGGCCAAGGCCGCCCTGACCGCGGCCCGT
ACGGCAGGTAACTCCATCTACGTCGTCCCTGCTATGCAAGCCGAGCTGGA
CCAGATGTCGGGTGTGCTGCACTGCGAGGAAGGTGACTACAAGACGTCCC
ATTCCTATTTCCTGGAGGCATTTGAGGCCTTCGATTCCTTGTCGGATCCT
CGCGCACGCAAGTGCCTGGAGTACATGATGCTGTGCTCCATCTTGCAAGG
AACGCCCCAGGAGGTGTCGGCAGTGACGAGCAAGCACGGGCTGAAATACG
CGGGGGAGGGAATGAGTGCTCTAGTGGCGATAGCGGCCGCGGCGAAGGCG
CGAAGTTTGGAGCTATTCGACGGGGCAAGGGAGGAATATGGGGGGGTGTT
GGCGGGGGATTTGTTGATGAAGCACCACGTGCACATCGTGTATGAGCAGC
TGCTGGAGTCGAATCTGTTGAAGATTATTGAGCCCTTTTCGTGCGTGGAG
ATAAGTCATGTGGCGTCTCTCATCAACCTGCCGGAGAAGACGGTGGAAAA
GAAGTTGTCGCAGATGATTCTGGATGACAAGATATTGGGGACGTTGGACC
AGGGGCAGGGGCAGCTGCTGGTGTATGAGGGTAGTGGCTTGGATAAGACG
TACACGCATGGGTTGGAGGTGATTGGAAATTTGGGGATGGTTGTGGACAG
CTTGTTCAGGCGGGCGCAGAAAATGTTGCACTCAGGGCATGTGGTGGGAG
GGGTGGGAGGAAGTGGGGAAGGGCCGGTGGAGAGTGCGTAAGATTGAAGA
GGGTTTTTGTAGGGAC back to topCoding sequence (CDS) from alignment at scaffold_5:1030987..1034752- >mRNA_2723 ID=mRNA_2723|Name=jgi.p|Nanoce1779_2|581302|organism=Nannochloropsis oceanica|type=CDS|length=2250bp|location=Sequence derived from alignment at scaffold_5:1030987..1034752- (Nannochloropsis oceanica)
GTCGTCGCTTGGTGCATCGCCCAGAAACGGACCTTCCTGCGTCAACGCAT
CGAGTCCCGACTCGCAGCCCTCCTCTTCCTCCGCGGGGATTACACGGACG
CCCTCTCCCTGATCAATAAACTTTTGCGCGAACTCAAAAAATTCGACGAC
AAGCAATTGCTTGTGGAGACCCACCTGATCGAGGCGCGCATTGACCACGC
CTTGCGCAACCTTCCCAAGGCCAAGGCCGCCCTGACCGCGGCCCGTACGG
CAGGTAACTCCATCTACGTCGTCCCTGCTATGCAAGCCGAGCTGGACCAG
ATGTCGGGTGTGCTGCACTGCGAGGAAGGTGACTACAAGACGTCCCATTC
CTATTTCCTGGAGGCATTTGAGGCCTTCGATTCCTTGTCGGATCCTCGCG
CACGCAAGTGCCTGGAGTACATGATGCTGTGCTCCATCTTGCAAGGAACG
CCCCAGGAGGTGTCGGCAGTGACGAGCAAGCACGGGCTGAAATACGCGGG
GGAGGGAATGAGTGCTCTAGTGGCGATAGCGGCCGCGGCGAAGGCGCGAA
GTTTGGAGCTATTCGACGGGGCAAGGGAGGAATATGGGGGGGTGTTGGCG
GGGGATTTGTTGATGAAGCACCACGTGCACATCGTGTATGAGCAGCTGCT
GGAGTCGAATCTGTTGAAGATTATTGAGCCCTTTTCGTGCGTGGAGATAA
GTCATGTGGCGTCTCTCATCAACCTGCCGGAGAAGACGGTGGAAAAGAAG
TTGTCGCAGATGATTCTGGATGACAAGATATTGGGGACGTTGGACCAGGG
GCAGGGGCAGCTGCTGGTGTATGAGGGTAGTGGCTTGGATAAGACGTACA
CGCATGGGTTGGAGGTGATTGGAAATTTGGGGATGGTTGTGGACAGCTTG
TTCAGGCGGGCGCAGAAAATGTTGCACTCAGGGCATGTGGTGGGAGGGGT
GGGAGGAAGTGGGGAAGGGCCGGTGGAGAGTGCGTAAATGGCCCTGCTCA
AGGATAGTAATGACTATTTTGCCCTGGTTCCCAAGGCCAAGACAGCGAAG
ATCGTGAGGACAATAATCGATATTGTCACTAAGGTTCCCAACTCGGTGGA
CCTGCAGGTGGAGCTGTGCAAGGAGGTCGTCGCTTGGTGCATCGCCCAGA
AACGGACCTTCCTGCGTCAACGCATCGAGTCCCGACTCGCAGCCCTCCTC
TTCCTCCGCGGGGATTACACGGACGCCCTCTCCCTGATCAATAAACTTTT
GCGCGAACTCAAAAAATTCGACGACAAGCAATTGCTTGTGGAGACCCACC
TGATCGAGGCGCGCATTGACCACGCCTTGCGCAACCTTCCCAAGGCCAAG
GCCGCCCTGACCGCGGCCCGTACGGCAGGTAACTCCATCTACGTCGTCCC
TGCTATGCAAGCCGAGCTGGACCAGATGTCGGGTGTGCTGCACTGCGAGG
AAGGTGACTACAAGACGTCCCATTCCTATTTCCTGGAGGCATTTGAGGCC
TTCGATTCCTTGTCGGATCCTCGCGCACGCAAGTGCCTGGAGTACATGAT
GCTGTGCTCCATCTTGCAAGGAACGCCCCAGGAGGTGTCGGCAGTGACGA
GCAAGCACGGGCTGAAATACGCGGGGGAGGGAATGAGTGCTCTAGTGGCG
ATAGCGGCCGCGGCGAAGGCGCGAAGTTTGGAGCTATTCGACGGGGCAAG
GGAGGAATATGGGGGGGTGTTGGCGGGGGATTTGTTGATGAAGCACCACG
TGCACATCGTGTATGAGCAGCTGCTGGAGTCGAATCTGTTGAAGATTATT
GAGCCCTTTTCGTGCGTGGAGATAAGTCATGTGGCGTCTCTCATCAACCT
GCCGGAGAAGACGGTGGAAAAGAAGTTGTCGCAGATGATTCTGGATGACA
AGATATTGGGGACGTTGGACCAGGGGCAGGGGCAGCTGCTGGTGTATGAG
GGTAGTGGCTTGGATAAGACGTACACGCATGGGTTGGAGGTGATTGGAAA
TTTGGGGATGGTTGTGGACAGCTTGTTCAGGCGGGCGCAGAAAATGTTGC
ACTCAGGGCATGTGGTGGGAGGGGTGGGAGGAAGTGGGGAAGGGCCGGTG
GAGAGTGCGTAAATGGCCCTGCTCAAGGATAGTAATGACTATTTTGCCCT
GGTTCCCAAGGCCAAGACAGCGAAGATCGTGAGGACAATAATCGATATTG
TCACTAAGGTTCCCAACTCGGTGGACCTGCAGGTGGAGCTGTGCAAGGAG back to top
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