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Properties
| Property Name | Value |
|---|
| TranscriptId | 337192 |
| Track | FilteredModels2 |
| ProteinId | 337106 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1011091..1013904 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2715 ID=mRNA_2715|Name=jgi.p|Nanoce1779_2|337106|organism=Nannochloropsis oceanica|type=mRNA|length=1087bp
AGACACACACATTACCAACACACTACCACAGGCCATAAAGAGGGATGCCA
CCTGTCGTTTTGGACGACACGGCTGTGGCCGCCTTGTTTGCGGATGTGGA
GGCCATGCCAGTGGAAAACGATGAGGAGAAGCAGCAAGCCTTTCCCCTCC
CAGTCCGCCTCCTCCAAGACGGTCTCTCCGGGGAGATGGTCCTCCTGCCC
GCATCTACGGCCAAGCCGGGTGACCCCACTTTCTTCTTTGAGCACATTGC
GGCCAGCACCACACCGTTTGGATTGCCTTTGCCGATCGCGGCAGACTTGC
TGCAGGAGCGGTACTTAGACGCGGGGGCCTTGCTCGATGAAATGCTCGAC
ACGCAAGAAGGCGGCGGGCCCGACTGCAAGCTTTGGACTCGTCAACTCTA
CACGTCTGCGTTGGAAACCCTCCTTATATCTCCTCCTCGATCCACCCTTC
TTCGAAACGACCCTGATTTGTTGACGGCCGGTATTTCCCCACATGCTGCT
TGGCACGGTGAGGGCGTCCGGGAGGTGCCATTGGAGGACGAGGAAGGAGG
GAAGGAAGGGAAGGAGGCGGAAATGAACAAGCACGGAGGAGGAGTAGGCT
TAGGAATGCACAAAAAGACGAAAATGGGGGGTTTGGGGAGGCTAAAGGAC
TATAGCAAGAGGAAGGCTGAGGTGCCCAACCCGTGGGCGCCACCGCAGAT
GACGGGCCTGCAGGGCGATCCGGGGCATCGGACGAAGGAGGCAGTGGAGA
AGAGTCTGATTGTCTTGGAGCTCACCGATGAAGAGAGTGCCACCATCTTC
CTCTCTGACAAGTCGCATTCTCCTCCTCCTCCTTCTCCCCCTCTCCCACG
AAGCCGAATCGAAAGGACTCTTGGGTCGTAACCTCCCGGCTGGACGTCTC
CGATTTCTCCGCCCTGGTGCCCAAGATGGCTATGGACTATCCCTTCCAAC
TTGACGACTTCCAACGACAGGCGATTGCAAGACTAGAGAGGGGGGAGTAC
GTGTTCGTCGCCGCGCACACGTCGGCGGGGAAGACGGTGGTGGCTGAATA
TGCCATAGCACTGTGCGCCTCCCACATGACCCGGGCC back to topprotein sequence of jgi.p|Nanoce1779_2|337106 >mRNA_2715-protein ID=mRNA_2715-protein|Name=jgi.p|Nanoce1779_2|337106|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MPPVVLDDTAVAALFADVEAMPVENDEEKQQAFPLPVRLLQDGLSGEMVL
LPASTAKPGDPTFFFEHIAASTTPFGLPLPIAADLLQERYLDAGALLDEM
LDTQEGGGPDCKLWTRQLYTSALETLLISPPRSTLLRNDPDLLTAGISPH
AAWHGEGVREVPLEDEEGGKEGKEAEMNKHGGGVGLGMHKKTKMGGLGRL
KDYSKRKAEVPNPWAPPQMTGLQGDPGHRTKEAVEKSLIVLELTDEESAT
IFLSDKSHSPPPPSPPLPRSRIERTLGS* back to topmRNA from alignment at scaffold_5:1011091..1013904+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2715 ID=mRNA_2715|Name=jgi.p|Nanoce1779_2|337106|organism=Nannochloropsis oceanica|type=mRNA|length=2814bp|location=Sequence derived from alignment at scaffold_5:1011091..1013904+ (Nannochloropsis oceanica)
AGACACACACATTACCAACACACTACCACAGGCCATAAAGAGGGATGCCA
CCTGTCGTTTTGGACGACACGGCTGTGGCCGCCTTGTTTGCGGATGTGGA
GGCCATGCCAGTGGAAAACGATGAGGAGAAGCAGCAAGCCTTTCCCCTCC
CAGTCCGCCTCCTCCAAGACGGTCTCTCCGGGGAGATGGTCCTCCTGCCC
GCATCTACGGCCAAGCCGGGTGACCCCACTTTCTTCTTTGAGCACATTGC
GGCCAGCACCACACCGTTTGGATTGCCTTTGCCGATCGCGGCAGACTTGC
TGCAGGAGCGGTACTTAGACGCGGGGGCCTTGCTCGATGAAATGGTAAGC
AATCAGGGACAGAGCTGAAAGAGCGCAACTGCCATTTTCCTTGATTCTTC
CGCATGTATATTTGCTAGAAATTGAAATTTTGCGTCTTGGGGGCTTTCGC
GTCCATTTTCCGTTTCCAATGCCTCATTCATCCTCCCCCACCCCTCCCCC
CTTCCCTTCCTCCCAGCTCGACACGCAAGAAGGCGGCGGGCCCGACTGCA
AGCTTTGGACTCGTCAACTCTACACGTCTGCGTTGGAAACCCTCCTTATA
TCTCCTCCTCGATCCACCCTTCTTCGAAACGACCCTGATTTGTTGACGGC
CGGTATTTCCCCACATGCTGCTTGGCACGGTGAGGGCGTCCGGGAGGTGC
CATTGGAGGACGAGGAAGGAGGGAAGGAAGGGAAGGAGGCGGAAATGAAC
AAGCACGGAGGAGGAGTAGGCTTAGGAATGCACAAAAAGACGAAAATGGG
GGGTTTGGGGAGGCTAAAGGACTATAGCAAGAGGAAGGCTGAGGTGCCCA
ACCCGTGGGCGCCACCGCAGGTAGGAGAGTAAGGGAGGGAGAGAGGGGAC
GGGAGGAGGGGCGCTTGTACACAGTCACTCACAAGGCGGCTCACGTACAA
TCGATGACGACGTTCCAACAGATGACGGGCCTGCAGGGCGATCCGGGGCA
TCGGACGAAGGAGGCAGTGGAGAAGAGTCTGATTGTCTTGGAGGTGAGTC
CGTTGTCCCATTAGATACGTCCCTACGCCAGAGGAACTGGTTCTCAAACT
ACCCATTGGGTGATACGTCGGCTTTGGCGACGATTGTCATTGATTGCCAC
CGATCACGAACACAGACCTCGGGCCGTTTTGGTGTCATGGATACCCCTCT
CCTCTTTCATCATATCAAGTGCATTTCACACTCGATTCCCTTGAATCTGT
CATCCCTTTTCGGTCGTCCACCTTGCCCCTCCCTCGCTCGCCCCCTCCCT
CTCACCACCATCACCACGTCCTTTCTGTGCTCTATCCCGTAAACGTCTTT
CCTCCCTCCCTCCCCCTCGCCCGTCTTCTTTCAAGCTTACCCCCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAACTCCAAGCT
CACCGATGAAGAGAGTGCCACCATCTTCCTCTCTGACAAGTCGCATTGTC
TCCTCCACGTTCCTCCCGGCGCCCTTTTCGTCCGCGGCCTTCGTCCCCGC
GACCTGGCCCAACAGCCAGGCATTAACGGCGAGACCGTTCCCCTCCCTCC
CTCCCCTCTTCCTTCCCCCCCTCCTCCTCCTCCTCCTCCTGAGTTCACCT
CTACTATTGCTACTGCTGCTACTCCTTCCGCTGGTACTGCTCCGTCGTCC
TCCCTGCGGTTTCAGGACTTGATGTACGATGAAGGCGATGATGAAGATGA
CCTTCTAGAGGACGAGGAGGAGGACGAGGAGGAGGACGAGGAGGAGGACG
AGGAGGAGGAGGATGGGGAGAAGGGGGAGCCACTTGCAGGACTGACTCAG
AGAGAGAAAGGAGGGAAAGAAGGGGGGGTATCATCAACGACGGCGGCGGC
AGTAGCGGCCAATGATGACATGCTGTACAAGCGGAGGATGGAGGAGGAGG
AGGAGGAGGAGGAGGATGATGAGGAGGAGGGGGGGGGGGGGGAGGGGGAT
GGGACTGATGGATGGCCTGCTGCGAGATGGAGCGATGACTAGCGGCAGCA
AGTACGTATGCCCCTCACTCTTTCCCTCCCTCCCTCCTTCTCTTCCTCTC
TCCCTCCCTCCCTCACGACCACCTTCCTTCCCTCCCTCCCTCACGACAAC
CTTCCTTCCCTCCCTCCCTCTCTTCCTCTCTCCCTCCCTCCCTCACGACC
ACCTTCCTTCCCTCCCTCACGACCACCCTCCTCTCTCCTTCACGACCACC
TTCCTTCCCTCCCTCACGACCACCTTCCTTCCCTCCCTCACGACCACCTT
CCTTCCCTCCCTCACGACCACCTTCCTTCCCTCCCCCCTCCCTCCTTTAG
GGTCCCCTTCGGAAACAGCAACAAATACTCGACACGCGCCCCTTCCTCCA
CCCACCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCCCCTCTCCC
ACGAAGCCGAATCGAAAGGACTCTTGGGTCGTAACCTCCCGGCTGGACGT
CTCCGATTTCTCCGCCCTGGTGCCCAAGATGGCTATGGACTATCCCTTCC
AACTTGACGACTTCCAACGACAGGCGATTGCAAGACTAGAGAGGGGGGAG
TACGTGTTCGTCGCCGCGCACACGTCGGCGGGGAAGACGGTGGTGGCTGA
ATATGCCATAGGTACGTCCCGTCCCTCCTTCCCTCCCCTCCCCCCCCTCC
CTCCTTCGTTTCCGCCTTGACAAGGCTCCCCGCTCTGTGTCACCTCAACC
TCCCTCCCTTCCCTCCCAACCGCCCCTCCTTCCAGCACTGTGCGCCTCCC
ACATGACCCGGGCC back to topCoding sequence (CDS) from alignment at scaffold_5:1011091..1013904+ >mRNA_2715 ID=mRNA_2715|Name=jgi.p|Nanoce1779_2|337106|organism=Nannochloropsis oceanica|type=CDS|length=4185bp|location=Sequence derived from alignment at scaffold_5:1011091..1013904+ (Nannochloropsis oceanica)
ATGCCACCTGTCGTTTTGGACGACACGGCTGTGGCCGCCTTGTTTGCGGA
TGTGGAGGCCATGCCAGTGGAAAACGATGAGGAGAAGCAGCAAGCCTTTC
CCCTCCCAGTCCGCCTCCTCCAAGACGGTCTCTCCGGGGAGATGGTCCTC
CTGCCCGCATCTACGGCCAAGCCGGGTGACCCCACTTTCTTCTTTGAGCA
CATTGCGGCCAGCACCACACCGTTTGGATTGCCTTTGCCGATCGCGGCAG
ACTTGCTGCAGGAGCGGTACTTAGACGCGGGGGCCTTGCTCGATGAAATG
CTCGACACGCAAGAAGGCGGCGGGCCCGACTGCAAGCTTTGGACTCGTCA
ACTCTACACGTCTGCGTTGGAAACCCTCCTTATATCTCCTCCTCGATCCA
CCCTTCTTCGAAACGACCCTGATTTGTTGACGGCCGGTATTTCCCCACAT
GCTGCTTGGCACGGTGAGGGCGTCCGGGAGGTGCCATTGGAGGACGAGGA
AGGAGGGAAGGAAGGGAAGGAGGCGGAAATGAACAAGCACGGAGGAGGAG
TAGGCTTAGGAATGCACAAAAAGACGAAAATGGGGGGTTTGGGGAGGCTA
AAGGACTATAGCAAGAGGAAGGCTGAGGTGCCCAACCCGTGGGCGCCACC
GCAGATGACGGGCCTGCAGGGCGATCCGGGGCATCGGACGAAGGAGGCAG
TGGAGAAGAGTCTGATTGTCTTGGAGCTCACCGATGAAGAGAGTGCCACC
ATCTTCCTCTCTGACAAGTCGCATTCTCCTCCTCCTCCTTCTCCCCCTCT
CCCACGAAGCCGAATCGAAAGGACTCTTGGGTCGTAAATGCCACCTGTCG
TTTTGGACGACACGGCTGTGGCCGCCTTGTTTGCGGATGTGGAGGCCATG
CCAGTGGAAAACGATGAGGAGAAGCAGCAAGCCTTTCCCCTCCCAGTCCG
CCTCCTCCAAGACGGTCTCTCCGGGGAGATGGTCCTCCTGCCCGCATCTA
CGGCCAAGCCGGGTGACCCCACTTTCTTCTTTGAGCACATTGCGGCCAGC
ACCACACCGTTTGGATTGCCTTTGCCGATCGCGGCAGACTTGCTGCAGGA
GCGGTACTTAGACGCGGGGGCCTTGCTCGATGAAATGCTCGACACGCAAG
AAGGCGGCGGGCCCGACTGCAAGCTTTGGACTCGTCAACTCTACACGTCT
GCGTTGGAAACCCTCCTTATATCTCCTCCTCGATCCACCCTTCTTCGAAA
CGACCCTGATTTGTTGACGGCCGGTATTTCCCCACATGCTGCTTGGCACG
GTGAGGGCGTCCGGGAGGTGCCATTGGAGGACGAGGAAGGAGGGAAGGAA
GGGAAGGAGGCGGAAATGAACAAGCACGGAGGAGGAGTAGGCTTAGGAAT
GCACAAAAAGACGAAAATGGGGGGTTTGGGGAGGCTAAAGGACTATAGCA
AGAGGAAGGCTGAGGTGCCCAACCCGTGGGCGCCACCGCAGATGACGGGC
CTGCAGGGCGATCCGGGGCATCGGACGAAGGAGGCAGTGGAGAAGAGTCT
GATTGTCTTGGAGCTCACCGATGAAGAGAGTGCCACCATCTTCCTCTCTG
ACAAGTCGCATTCTCCTCCTCCTCCTTCTCCCCCTCTCCCACGAAGCCGA
ATCGAAAGGACTCTTGGGTCGTAAATGCCACCTGTCGTTTTGGACGACAC
GGCTGTGGCCGCCTTGTTTGCGGATGTGGAGGCCATGCCAGTGGAAAACG
ATGAGGAGAAGCAGCAAGCCTTTCCCCTCCCAGTCCGCCTCCTCCAAGAC
GGTCTCTCCGGGGAGATGGTCCTCCTGCCCGCATCTACGGCCAAGCCGGG
TGACCCCACTTTCTTCTTTGAGCACATTGCGGCCAGCACCACACCGTTTG
GATTGCCTTTGCCGATCGCGGCAGACTTGCTGCAGGAGCGGTACTTAGAC
GCGGGGGCCTTGCTCGATGAAATGCTCGACACGCAAGAAGGCGGCGGGCC
CGACTGCAAGCTTTGGACTCGTCAACTCTACACGTCTGCGTTGGAAACCC
TCCTTATATCTCCTCCTCGATCCACCCTTCTTCGAAACGACCCTGATTTG
TTGACGGCCGGTATTTCCCCACATGCTGCTTGGCACGGTGAGGGCGTCCG
GGAGGTGCCATTGGAGGACGAGGAAGGAGGGAAGGAAGGGAAGGAGGCGG
AAATGAACAAGCACGGAGGAGGAGTAGGCTTAGGAATGCACAAAAAGACG
AAAATGGGGGGTTTGGGGAGGCTAAAGGACTATAGCAAGAGGAAGGCTGA
GGTGCCCAACCCGTGGGCGCCACCGCAGATGACGGGCCTGCAGGGCGATC
CGGGGCATCGGACGAAGGAGGCAGTGGAGAAGAGTCTGATTGTCTTGGAG
CTCACCGATGAAGAGAGTGCCACCATCTTCCTCTCTGACAAGTCGCATTC
TCCTCCTCCTCCTTCTCCCCCTCTCCCACGAAGCCGAATCGAAAGGACTC
TTGGGTCGTAAATGCCACCTGTCGTTTTGGACGACACGGCTGTGGCCGCC
TTGTTTGCGGATGTGGAGGCCATGCCAGTGGAAAACGATGAGGAGAAGCA
GCAAGCCTTTCCCCTCCCAGTCCGCCTCCTCCAAGACGGTCTCTCCGGGG
AGATGGTCCTCCTGCCCGCATCTACGGCCAAGCCGGGTGACCCCACTTTC
TTCTTTGAGCACATTGCGGCCAGCACCACACCGTTTGGATTGCCTTTGCC
GATCGCGGCAGACTTGCTGCAGGAGCGGTACTTAGACGCGGGGGCCTTGC
TCGATGAAATGCTCGACACGCAAGAAGGCGGCGGGCCCGACTGCAAGCTT
TGGACTCGTCAACTCTACACGTCTGCGTTGGAAACCCTCCTTATATCTCC
TCCTCGATCCACCCTTCTTCGAAACGACCCTGATTTGTTGACGGCCGGTA
TTTCCCCACATGCTGCTTGGCACGGTGAGGGCGTCCGGGAGGTGCCATTG
GAGGACGAGGAAGGAGGGAAGGAAGGGAAGGAGGCGGAAATGAACAAGCA
CGGAGGAGGAGTAGGCTTAGGAATGCACAAAAAGACGAAAATGGGGGGTT
TGGGGAGGCTAAAGGACTATAGCAAGAGGAAGGCTGAGGTGCCCAACCCG
TGGGCGCCACCGCAGATGACGGGCCTGCAGGGCGATCCGGGGCATCGGAC
GAAGGAGGCAGTGGAGAAGAGTCTGATTGTCTTGGAGCTCACCGATGAAG
AGAGTGCCACCATCTTCCTCTCTGACAAGTCGCATTCTCCTCCTCCTCCT
TCTCCCCCTCTCCCACGAAGCCGAATCGAAAGGACTCTTGGGTCGTAAAT
GCCACCTGTCGTTTTGGACGACACGGCTGTGGCCGCCTTGTTTGCGGATG
TGGAGGCCATGCCAGTGGAAAACGATGAGGAGAAGCAGCAAGCCTTTCCC
CTCCCAGTCCGCCTCCTCCAAGACGGTCTCTCCGGGGAGATGGTCCTCCT
GCCCGCATCTACGGCCAAGCCGGGTGACCCCACTTTCTTCTTTGAGCACA
TTGCGGCCAGCACCACACCGTTTGGATTGCCTTTGCCGATCGCGGCAGAC
TTGCTGCAGGAGCGGTACTTAGACGCGGGGGCCTTGCTCGATGAAATGCT
CGACACGCAAGAAGGCGGCGGGCCCGACTGCAAGCTTTGGACTCGTCAAC
TCTACACGTCTGCGTTGGAAACCCTCCTTATATCTCCTCCTCGATCCACC
CTTCTTCGAAACGACCCTGATTTGTTGACGGCCGGTATTTCCCCACATGC
TGCTTGGCACGGTGAGGGCGTCCGGGAGGTGCCATTGGAGGACGAGGAAG
GAGGGAAGGAAGGGAAGGAGGCGGAAATGAACAAGCACGGAGGAGGAGTA
GGCTTAGGAATGCACAAAAAGACGAAAATGGGGGGTTTGGGGAGGCTAAA
GGACTATAGCAAGAGGAAGGCTGAGGTGCCCAACCCGTGGGCGCCACCGC
AGATGACGGGCCTGCAGGGCGATCCGGGGCATCGGACGAAGGAGGCAGTG
GAGAAGAGTCTGATTGTCTTGGAGCTCACCGATGAAGAGAGTGCCACCAT
CTTCCTCTCTGACAAGTCGCATTCTCCTCCTCCTCCTTCTCCCCCTCTCC
CACGAAGCCGAATCGAAAGGACTCTTGGGTCGTAA back to top
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