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Properties
| Property Name | Value |
|---|
| TranscriptId | 581328 |
| Track | FilteredModels2 |
| ProteinId | 581242 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:980420..983017 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2703 ID=mRNA_2703|Name=jgi.p|Nanoce1779_2|581242|organism=Nannochloropsis oceanica|type=mRNA|length=2061bp
GGAGGGAGGGAGGAGGGAGAGAAGGGGGAAGAGGCACAAATTGAGGAGAG
ATAAGAGGGTGGTTGGAGGCGAGGAGGTGGGTGAAAACCCGGAAGGAGAG
AAGGATGACGGTTGGTATAGCGATGAGGAGGGAGAAGGAATGTTATTGTT
GAAGAGACCGCATTTCCAAGCCTGTCACATTGAACAGGACTCCTTGTCTG
TCGGATTCGGACCGCATGGCATAATGTAAATTGAATTAAGGGGGGGGAGA
GAAAGCGAGGTAGAACCCTGTACATCAAGTTTTTTTTGCCTGTAGAAATG
GACACGATTTACCTAAGGCGAGGAGCGAGTCTCACGGCAGCCGATACTAC
CTATGTGTTCATTGCCCCTGTACATGGAACCCCAATGCTCAGAGACATAG
TAAATAGAAGAGATTTAGAACACTTTTCGTTCACGCTTTATTTCGGAAGG
CTAGGGCTGCTTGCCTTCCTTGTACCCTTTCTTTTATTCTTTTTGGCCTT
TCTTACACGAGCTGTGCACGCCTTTATCTAGAACGATGGCTATTAATGCA
TGAAGATCGTGGTCAAGCTCCTCTGAGTGTCACGAACCAGCCCACATCCG
TCTGAAGTCACACATCGAAAGACCCTATATAGGTTGGCATCCGGTGGAGT
CCACCTTTCCGTCGGCAGTTGAAAGCTCAACTTGCTGGTGCCTTCTTGCA
CATGGCTGGCTGGTCACATCTACTACTCTCGATGACTGCGCGTTCTCACC
CATCCCTCCTCCCTCTTCTCTTTCACACAGAATGAAAGTTCCCAGCTTTG
TTCTTTTGAGCGCATCTACGGCTTCTGCATTTGTCGCGCCCGCCTACCAC
AGCGCCCGTCTTGCCGCCGCCGCCGCCATCACACGAAGCAGCAGCAAGTA
TCGCACAATGTCCTCCTCCAGCAGCAATGGGCACGGGCGTGGTCCCTCCA
TGCTTTTTCAGCGGCCCAAGGTGGCCAATGACGTGACGGAACTGATTGGT
AATACGCCCTTGGTGCGTTTGAACCGCGTGACGGTCGGGTGCCAGGCAGA
GATTTTGGCCAAGCTGGAGTCTATGGAGCCCTGCAACTCTGTGAAGGACC
GCATTGCTTACAGCATGATCACCGAAGCCGAGAACCGCGGAGAGATCAGT
CCCGGCAAAACAGTGCTCGTGGAGCCTACCTCGGGTAACACAGGCATTGG
CCTGGCCATGGTGGCGGCCGCCAAAGGATATGAATTGATCTTGACCATGC
CGGAGAGCATGTCGATGGAACGCCGTGTGTTGCTCAAGGCTTTTGGGGCG
AACCTGGTGCTGACCGTAGCCAGCAAGGGCATGAAGGGTGCCATTGCCAA
AGCCCAGGAGATAGTGGACTCCCTGGGGGATAAGGGCTATATGCTGCAGC
AGTTCGAGAATCCTGACAACCCAAAGATTCACCTAGAGACGACGGGGCCT
GAGATTTGGACCGATACCGATGGGGAGATCGATATTCTCGTTGGCGGGGT
CGGCACCGGCGGGACCATGACGGGATGTGCGCAGTACCTTAAGTCTAAGA
AGAGCACTTGTCAAGCCATTGCCGTCGAGCCCCGCGAAAGCGCCGTCTTG
TCCGGGGGTCAACCAGGTCCCCACAAAATCCAAGGGATCGGCGCGGGCTT
CGTGCCTCAAAACGCTGACATGACTTTATTTGATGAAGTGCAGCAGGTAT
CGAGCGAGGAGTCGATTGAGATGGCGAGGGAGCTGGCGAAGAAGGAAGGG
CTGTTGGTAGGAATCTCGTCGGGCGCGGCCGTCACGGCCGCCATCCGGGT
AGGATCCAGGCCAGAAAATGCGAACAAGAAGATTGTTGTGGTCATTCCCT
CGTTCGGAGAGAGGTATCTGTCGACAGCCTTGTTCCAGAATCTTTGGGAT
GATGCCGCGAGAATGTCCGTCCAGGATTGCTAATCATTTTGGGATTGCTA
ATTGTATTAGGAGTGCTAAGATGAAGGACGAGATGTAGAGGAGCGAACGG
GGAGCAAAGGAAGGTGAAAAGATATATTTGATGGTTGTGGCTGTCTCAAT
TATGGGGAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|581242 >mRNA_2703-protein ID=mRNA_2703-protein|Name=jgi.p|Nanoce1779_2|581242|organism=Nannochloropsis oceanica|type=polypeptide|length=384bp
MKVPSFVLLSASTASAFVAPAYHSARLAAAAAITRSSSKYRTMSSSSSNG
HGRGPSMLFQRPKVANDVTELIGNTPLVRLNRVTVGCQAEILAKLESMEP
CNSVKDRIAYSMITEAENRGEISPGKTVLVEPTSGNTGIGLAMVAAAKGY
ELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGD
KGYMLQQFENPDNPKIHLETTGPEIWTDTDGEIDILVGGVGTGGTMTGCA
QYLKSKKSTCQAIAVEPRESAVLSGGQPGPHKIQGIGAGFVPQNADMTLF
DEVQQVSSEESIEMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKK
IVVVIPSFGERYLSTALFQNLWDDAARMSVQDC* back to topmRNA from alignment at scaffold_5:980420..983017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2703 ID=mRNA_2703|Name=jgi.p|Nanoce1779_2|581242|organism=Nannochloropsis oceanica|type=mRNA|length=2598bp|location=Sequence derived from alignment at scaffold_5:980420..983017- (Nannochloropsis oceanica)
GGAGGGAGGGAGGAGGGAGAGAAGGGGGAAGAGGCACAAATTGAGGAGAG
ATAAGAGGGTGGTTGGAGGCGAGGAGGTGGGTGAAAACCCGGAAGGAGAG
AAGGATGACGGTTGGTATAGCGATGAGGAGGGAGAAGGAATGTTATTGTT
GAAGAGACCGCATTTCCAAGCCTGTCACATTGAACAGGACTCCTTGTCTG
TCGGATTCGGACCGCATGGCATAATGTAAATTGAATTAAGGGGGGGGAGA
GAAAGCGAGGTAGAACCCTGTACATCAAGTTTTTTTTGCCTGTAGAAATG
GACACGATTTACCTAAGGCGAGGAGCGAGTCTCACGGCAGCCGATACTAC
CTATGTGTTCATTGCCCCTGTACATGGAACCCCAATGCTCAGAGACATAG
TAAATAGAAGAGATTTAGAACACTTTTCGTTCACGCTTTATTTCGGAAGG
CTAGGGCTGCTTGCCTTCCTTGTACCCTTTCTTTTATTCTTTTTGGCCTT
TCTTACACGAGCTGTGCACGCCTTTATCTAGAACGATGGCTATTAATGCA
TGAAGATCGTGGTCAAGCTCCTCTGAGTGTCACGAACCAGCCCACATCCG
TCTGAAGTCACACATCGAAAGACCCTATATAGGTTGGCATCCGGTGGAGT
CCACCTTTCCGTCGGCAGTTGAAAGCTCAACTTGCTGGTGCCTTCTTGCA
CATGGCTGGCTGGTCACATCTACTACTCTCGATGACTGCGCGTTCTCACC
CATCCCTCCTCCCTCTTCTCTTTCACACAGAATGAAAGTTCCCAGCTTTG
TTCTTTTGAGCGCATCTACGGGTAAGTGTTTCGAAAATGGTGTGTGGAAC
TCTGCTTGTGGTCAGGAGTGTAGAGAATGACGATGGAGGAACCAGACACT
GGAGGGCACTGTGTCCCTTTAGCCTTCATTCACCTGTGTACACACATAAA
ACATCCCCACACCCATGCACAAAGCTTCTGCATTTGTCGCGCCCGCCTAC
CACAGCGCCCGTCTTGCCGCCGCCGCCGCCATCACACGAAGCAGCAGCAA
GTATCGCACAATGTCCTCCTCCAGCAGCAATGGGCACGGGCGTGGTCCCT
CCATGCTTTTTCAGCGGCCCAAGGTGGCCAATGACGTGACGGAACTGATT
GGTAATACGCCCTTGGTGCGTTTGAACCGCGTGACGGTCGGGTGCCAGGC
AGAGATTTTGGCCAAGCTGGAGTCTATGGAGCCCTGCAACTCTGTGAAGG
ACCGCATTGCTTACAGGTAAAAGGAATAGCATGACAGCAAGAAGTGGTAG
AGCTACTACAGAAAAGGTGCAGAGTCCTATATATTCGAGCGCAGATCATT
TTCGACAAAGCACTAATTTAAACTTTCCTCCTTTCCCCCTTTCCCTCCAT
CCCTTCTTCCCTCCTTCCATCCCTCCTTCCCATTCTCCCTCCCTCTAGCA
TGATCACCGAAGCCGAGAACCGCGGAGAGATCAGTCCCGGCAAAACAGTG
CTCGTGGAGCCTACCTCGGGTAACACAGGCATTGGCCTGGCCATGGTGGC
GGCCGCCAAAGGATATGAATTGATCTTGACCATGCCGGAGAGCATGTCGA
TGGAACGCCGTGTGTTGCTCAAGGCTTTTGGGGCGAACCTGGTGCTGACC
GTAGCCAGCAAGGGCATGAAGGGTGCCATTGCCAAAGCCCAGGAGATAGT
GGACTCCCTGGGGGATAAGGGCTATATGCTGCAGCAGTTCGAGAATCCTG
ACAACCCAAAGATTCACCTAGAGACGACGGGGCCTGAGATTTGGACCGAT
ACCGATGGGGAGGTAGGCTCCCTCCCTCCCTCCCTCCTTTTCCTGACCCC
ATAACTTCTTTTGACAAACTATGTTGGGTCTTTAGGGATGGAGCGACAAG
CGTCTGCAATTGAAGACGGTACCTGGCATCAATGAGAGGGAGTTTCTAAC
TCTTAATCCCTCGCCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCTCTCC
TCTCACTCGTCTAGATCGATATTCTCGTTGGCGGGGTCGGCACCGGCGGG
ACCATGACGGGATGTGCGCAGTACCTTAAGTCTAAGAAGAGCACTTGTCA
AGCCATTGCCGTCGAGCCCCGCGAAAGCGCCGTCTTGTCCGGGGGTCAAC
CAGGTCCCCACAAAATCCAAGGGATCGGCGCGGGCTTCGTGCCTCAAAAC
GCTGACATGACTTTATTTGATGAAGTGCAGCAGGTATCGAGCGAGGAGTC
GATTGAGATGGCGAGGGAGCTGGCGAAGAAGGAAGGGCTGTTGGTAGGAA
TCTCGTCGGGCGCGGCCGTCACGGCCGCCATCCGGGTAGGATCCAGGCCA
GAAAATGCGAACAAGAAGATTGTTGTGGTCATTCCCTCGTTCGGAGAGAG
GTATCTGTCGACAGCCTTGTTCCAGAATCTTTGGGATGATGCCGCGAGAA
TGTCCGTCCAGGATTGCTAATCATTTTGGGATTGCTAATTGTATTAGGAG
TGCTAAGATGAAGGACGAGATGTAGAGGAGCGAACGGGGAGCAAAGGAAG
GTGAAAAGATATATTTGATGGTTGTGGCTGTCTCAATTATGGGGAGAG back to topCoding sequence (CDS) from alignment at scaffold_5:980420..983017- >mRNA_2703 ID=mRNA_2703|Name=jgi.p|Nanoce1779_2|581242|organism=Nannochloropsis oceanica|type=CDS|length=4608bp|location=Sequence derived from alignment at scaffold_5:980420..983017- (Nannochloropsis oceanica)
ATCGATATTCTCGTTGGCGGGGTCGGCACCGGCGGGACCATGACGGGATG
TGCGCAGTACCTTAAGTCTAAGAAGAGCACTTGTCAAGCCATTGCCGTCG
AGCCCCGCGAAAGCGCCGTCTTGTCCGGGGGTCAACCAGGTCCCCACAAA
ATCCAAGGGATCGGCGCGGGCTTCGTGCCTCAAAACGCTGACATGACTTT
ATTTGATGAAGTGCAGCAGGTATCGAGCGAGGAGTCGATTGAGATGGCGA
GGGAGCTGGCGAAGAAGGAAGGGCTGTTGGTAGGAATCTCGTCGGGCGCG
GCCGTCACGGCCGCCATCCGGGTAGGATCCAGGCCAGAAAATGCGAACAA
GAAGATTGTTGTGGTCATTCCCTCGTTCGGAGAGAGGTATCTGTCGACAG
CCTTGTTCCAGAATCTTTGGGATGATGCCGCGAGAATGTCCGTCCAGGAT
TGCTAACATGATCACCGAAGCCGAGAACCGCGGAGAGATCAGTCCCGGCA
AAACAGTGCTCGTGGAGCCTACCTCGGGTAACACAGGCATTGGCCTGGCC
ATGGTGGCGGCCGCCAAAGGATATGAATTGATCTTGACCATGCCGGAGAG
CATGTCGATGGAACGCCGTGTGTTGCTCAAGGCTTTTGGGGCGAACCTGG
TGCTGACCGTAGCCAGCAAGGGCATGAAGGGTGCCATTGCCAAAGCCCAG
GAGATAGTGGACTCCCTGGGGGATAAGGGCTATATGCTGCAGCAGTTCGA
GAATCCTGACAACCCAAAGATTCACCTAGAGACGACGGGGCCTGAGATTT
GGACCGATACCGATGGGGAGCTTCTGCATTTGTCGCGCCCGCCTACCACA
GCGCCCGTCTTGCCGCCGCCGCCGCCATCACACGAAGCAGCAGCAAGTAT
CGCACAATGTCCTCCTCCAGCAGCAATGGGCACGGGCGTGGTCCCTCCAT
GCTTTTTCAGCGGCCCAAGGTGGCCAATGACGTGACGGAACTGATTGGTA
ATACGCCCTTGGTGCGTTTGAACCGCGTGACGGTCGGGTGCCAGGCAGAG
ATTTTGGCCAAGCTGGAGTCTATGGAGCCCTGCAACTCTGTGAAGGACCG
CATTGCTTACAGATGAAAGTTCCCAGCTTTGTTCTTTTGAGCGCATCTAC
GGATCGATATTCTCGTTGGCGGGGTCGGCACCGGCGGGACCATGACGGGA
TGTGCGCAGTACCTTAAGTCTAAGAAGAGCACTTGTCAAGCCATTGCCGT
CGAGCCCCGCGAAAGCGCCGTCTTGTCCGGGGGTCAACCAGGTCCCCACA
AAATCCAAGGGATCGGCGCGGGCTTCGTGCCTCAAAACGCTGACATGACT
TTATTTGATGAAGTGCAGCAGGTATCGAGCGAGGAGTCGATTGAGATGGC
GAGGGAGCTGGCGAAGAAGGAAGGGCTGTTGGTAGGAATCTCGTCGGGCG
CGGCCGTCACGGCCGCCATCCGGGTAGGATCCAGGCCAGAAAATGCGAAC
AAGAAGATTGTTGTGGTCATTCCCTCGTTCGGAGAGAGGTATCTGTCGAC
AGCCTTGTTCCAGAATCTTTGGGATGATGCCGCGAGAATGTCCGTCCAGG
ATTGCTAACATGATCACCGAAGCCGAGAACCGCGGAGAGATCAGTCCCGG
CAAAACAGTGCTCGTGGAGCCTACCTCGGGTAACACAGGCATTGGCCTGG
CCATGGTGGCGGCCGCCAAAGGATATGAATTGATCTTGACCATGCCGGAG
AGCATGTCGATGGAACGCCGTGTGTTGCTCAAGGCTTTTGGGGCGAACCT
GGTGCTGACCGTAGCCAGCAAGGGCATGAAGGGTGCCATTGCCAAAGCCC
AGGAGATAGTGGACTCCCTGGGGGATAAGGGCTATATGCTGCAGCAGTTC
GAGAATCCTGACAACCCAAAGATTCACCTAGAGACGACGGGGCCTGAGAT
TTGGACCGATACCGATGGGGAGCTTCTGCATTTGTCGCGCCCGCCTACCA
CAGCGCCCGTCTTGCCGCCGCCGCCGCCATCACACGAAGCAGCAGCAAGT
ATCGCACAATGTCCTCCTCCAGCAGCAATGGGCACGGGCGTGGTCCCTCC
ATGCTTTTTCAGCGGCCCAAGGTGGCCAATGACGTGACGGAACTGATTGG
TAATACGCCCTTGGTGCGTTTGAACCGCGTGACGGTCGGGTGCCAGGCAG
AGATTTTGGCCAAGCTGGAGTCTATGGAGCCCTGCAACTCTGTGAAGGAC
CGCATTGCTTACAGATGAAAGTTCCCAGCTTTGTTCTTTTGAGCGCATCT
ACGGATCGATATTCTCGTTGGCGGGGTCGGCACCGGCGGGACCATGACGG
GATGTGCGCAGTACCTTAAGTCTAAGAAGAGCACTTGTCAAGCCATTGCC
GTCGAGCCCCGCGAAAGCGCCGTCTTGTCCGGGGGTCAACCAGGTCCCCA
CAAAATCCAAGGGATCGGCGCGGGCTTCGTGCCTCAAAACGCTGACATGA
CTTTATTTGATGAAGTGCAGCAGGTATCGAGCGAGGAGTCGATTGAGATG
GCGAGGGAGCTGGCGAAGAAGGAAGGGCTGTTGGTAGGAATCTCGTCGGG
CGCGGCCGTCACGGCCGCCATCCGGGTAGGATCCAGGCCAGAAAATGCGA
ACAAGAAGATTGTTGTGGTCATTCCCTCGTTCGGAGAGAGGTATCTGTCG
ACAGCCTTGTTCCAGAATCTTTGGGATGATGCCGCGAGAATGTCCGTCCA
GGATTGCTAACATGATCACCGAAGCCGAGAACCGCGGAGAGATCAGTCCC
GGCAAAACAGTGCTCGTGGAGCCTACCTCGGGTAACACAGGCATTGGCCT
GGCCATGGTGGCGGCCGCCAAAGGATATGAATTGATCTTGACCATGCCGG
AGAGCATGTCGATGGAACGCCGTGTGTTGCTCAAGGCTTTTGGGGCGAAC
CTGGTGCTGACCGTAGCCAGCAAGGGCATGAAGGGTGCCATTGCCAAAGC
CCAGGAGATAGTGGACTCCCTGGGGGATAAGGGCTATATGCTGCAGCAGT
TCGAGAATCCTGACAACCCAAAGATTCACCTAGAGACGACGGGGCCTGAG
ATTTGGACCGATACCGATGGGGAGCTTCTGCATTTGTCGCGCCCGCCTAC
CACAGCGCCCGTCTTGCCGCCGCCGCCGCCATCACACGAAGCAGCAGCAA
GTATCGCACAATGTCCTCCTCCAGCAGCAATGGGCACGGGCGTGGTCCCT
CCATGCTTTTTCAGCGGCCCAAGGTGGCCAATGACGTGACGGAACTGATT
GGTAATACGCCCTTGGTGCGTTTGAACCGCGTGACGGTCGGGTGCCAGGC
AGAGATTTTGGCCAAGCTGGAGTCTATGGAGCCCTGCAACTCTGTGAAGG
ACCGCATTGCTTACAGATGAAAGTTCCCAGCTTTGTTCTTTTGAGCGCAT
CTACGGATCGATATTCTCGTTGGCGGGGTCGGCACCGGCGGGACCATGAC
GGGATGTGCGCAGTACCTTAAGTCTAAGAAGAGCACTTGTCAAGCCATTG
CCGTCGAGCCCCGCGAAAGCGCCGTCTTGTCCGGGGGTCAACCAGGTCCC
CACAAAATCCAAGGGATCGGCGCGGGCTTCGTGCCTCAAAACGCTGACAT
GACTTTATTTGATGAAGTGCAGCAGGTATCGAGCGAGGAGTCGATTGAGA
TGGCGAGGGAGCTGGCGAAGAAGGAAGGGCTGTTGGTAGGAATCTCGTCG
GGCGCGGCCGTCACGGCCGCCATCCGGGTAGGATCCAGGCCAGAAAATGC
GAACAAGAAGATTGTTGTGGTCATTCCCTCGTTCGGAGAGAGGTATCTGT
CGACAGCCTTGTTCCAGAATCTTTGGGATGATGCCGCGAGAATGTCCGTC
CAGGATTGCTAACATGATCACCGAAGCCGAGAACCGCGGAGAGATCAGTC
CCGGCAAAACAGTGCTCGTGGAGCCTACCTCGGGTAACACAGGCATTGGC
CTGGCCATGGTGGCGGCCGCCAAAGGATATGAATTGATCTTGACCATGCC
GGAGAGCATGTCGATGGAACGCCGTGTGTTGCTCAAGGCTTTTGGGGCGA
ACCTGGTGCTGACCGTAGCCAGCAAGGGCATGAAGGGTGCCATTGCCAAA
GCCCAGGAGATAGTGGACTCCCTGGGGGATAAGGGCTATATGCTGCAGCA
GTTCGAGAATCCTGACAACCCAAAGATTCACCTAGAGACGACGGGGCCTG
AGATTTGGACCGATACCGATGGGGAGCTTCTGCATTTGTCGCGCCCGCCT
ACCACAGCGCCCGTCTTGCCGCCGCCGCCGCCATCACACGAAGCAGCAGC
AAGTATCGCACAATGTCCTCCTCCAGCAGCAATGGGCACGGGCGTGGTCC
CTCCATGCTTTTTCAGCGGCCCAAGGTGGCCAATGACGTGACGGAACTGA
TTGGTAATACGCCCTTGGTGCGTTTGAACCGCGTGACGGTCGGGTGCCAG
GCAGAGATTTTGGCCAAGCTGGAGTCTATGGAGCCCTGCAACTCTGTGAA
GGACCGCATTGCTTACAGATGAAAGTTCCCAGCTTTGTTCTTTTGAGCGC
ATCTACGG back to top
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