Properties
Property Name | Value |
TranscriptId | 581293 |
Track | FilteredModels2 |
ProteinId | 581207 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_5 | supercontig | scaffold_5:953045..954586 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2695 ID=mRNA_2695|Name=jgi.p|Nanoce1779_2|581207|organism=Nannochloropsis oceanica|type=mRNA|length=1261bp GTCGTTAATTTCTTCGATGATGTGTTGTTCAACAAGTTGTGTTCCATGCT TAGTTTAATTTGTGCCCATATTTTTCTCGTCCTCACCCACGCTCACGAAG CCTACGATGACCCAAAACTGAAATGGACAGTAGATAGACTTAAGCGCAAG AAATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTCATTGGCT GTGGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTTTTGCCGT CCCATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAGCAGCAGC AGCGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCTTCTGCCT TCCCGACGGCCCTTTCGCGTGACCCCCACTACGACGCGCCTCGACGAGGT AGGGACACCCACGATTCAACGCCCTGTCTCCCTCCAAGAGATGGGGCAGC TTTTGCTGCAGGAAAAAAAAACATTCGGGGCGGCCTTGACGGGTATTGGG CTGGCTTCTGCCTGCCAAATGTGCGTCCCTTACATCTTCGGAAGAGTAGT GGATTTGTTGTCGGCGTCGGTGGGTATCGGTGTGAGCACGGCCGGCGCCA GTGAGCTAGTGAGCAATTCTGTTGTGATGGAGGGACTACGAGACAATGCA ATGGCCATGCTTGGCGTGGGGTTGGTAGGGACGATGGCCACATACGCGAG CACGGCTCAGTTGGACATAGTGGGACAGCGGATCTCGATGGACTTACGGA AGCGTTTGTTTAGCAACATTCTGGATCAAGACCTCGCCTTCTTCGACGTG AACAAATCGGGCGAGCTGGCCAATCGCCTCTCGACTGACGTTCACGAGGT CGCGGAGCACCTGGTAGAAAACGTTTCACTGTTCCTGTCGGCGGCCGTTA TGGCCACAGGAAGTGCCGGCATGCTATTGTATATCTCGCCTTCCCTGAGT GTTGTCACTCTTTCCGTTGTTCCCGCCATGGTGTTGGGCGCGGCACAATA TTCTAAAATCGTCAAGAAATTGAGCCTTGCCCTGTTGAACAGCTTAGCAG TGAGCACCCAGCAGGCGGCAGAAAAAATGGGTGCCATCCGAATTGTTCGT CACTTTGCTGCCGAGGACCGGGAGAAAGAGAGATACGGGAATATCATTGA TATGTCTCTGGGGCTGGCGAGGAAACTTGCGGTCTCGGAGGGGGTGTATG TGGCGGCGATCTTCGCAGTGTCGAATTTTGCGTTGCTGGGGGTGTTGTTT TTAGGGGCGGG back to topprotein sequence of jgi.p|Nanoce1779_2|581207 >mRNA_2695-protein ID=mRNA_2695-protein|Name=jgi.p|Nanoce1779_2|581207|organism=Nannochloropsis oceanica|type=polypeptide|length=109bp MLSLICAHIFLVLTHAHEAYDDPKLKWTVDRLKRKKCCFCIGGFGSGAFH WLWHEALLSGLGMRRLLPSHYAWPSRSHCLRASSSSGISSSHHQHPNHPF CLPDGPFA* back to topmRNA from alignment at scaffold_5:953045..954586+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2695 ID=mRNA_2695|Name=jgi.p|Nanoce1779_2|581207|organism=Nannochloropsis oceanica|type=mRNA|length=1542bp|location=Sequence derived from alignment at scaffold_5:953045..954586+ (Nannochloropsis oceanica) GTCGTTAATTTCTTCGATGATGTGTTGTTCAACAAGTTGTGTTCCATGCT
TAGTTTAATTTGTGCCCATATTTTTCTCGTCCTCACCCACGCTCACGAAG
CCTACGATGACCCAAAACTGAAATGGACAGTAGATAGACTTAAGCGCAAG
AAATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTCATTGGCT
GTGGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTTTTGCCGT
CCCATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAGCAGCAGC
AGCGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCTTCTGCCT
TCCCGACGGCCCTTTCGCGTGACCCCCACTACGACGCGCCTCGACGAGGT
AGGGACACCCACGATTCAACGCCCTGTCTCCCTCCAAGAGATGGGGCAGC
TTTTGCTGCAGGAAAAAAAAACATTCGGGGCGGCCTTGACGGGTATTGGG
CTGGCTTCTGCCTGCCAAATGTGCGTCCCTTACATCTTCGGAAGAGTAGT
GGATTTGTTGTCGGCGTCGGTGGGTATCGGTGTGAGCACGGCCGGCGCCA
GTGAGCTAGTGAGCAATTCTGTTGTGATGGAGGGACTACGAGACAATGCA
ATGGCCATGCTTGGCGTGGGGTTGGTAGGGACGATGGCCACATACGCGAG
CACGGCTCAGTTGGACATAGTGGGACAGCGGATCTCGATGGACTTACGGA
AGCGTTTGTTTAGCAACATTGTACGTAATAGTGGAGGGAGGGAGGGGAGG
GAAGGGGGGGGAAAGGACGAGGCGGATGGAGCAAGGACAAATCCGTCTCT
TGGCAGAGGTGTATCTGTAATATTCATGTCGATGCGTGGAGTTTCCATGG
AGGGACGGGCTGAGAGCTGAGAAAGAAAGCAAGAAAGTAACATAAGAGAA
GGTGGATCAACTTCCCTCTTCCTTTTCCAAAAACTCATCCACACCTTTCT
TCCCTTTCCTCTCTCTCTCCTTTCACTTCCTCCCTTCCTCTACTTCTGCA
GCTGGATCAAGACCTCGCCTTCTTCGACGTGAACAAATCGGGCGAGCTGG
CCAATCGCCTCTCGACTGACGTTCACGAGGTCGCGGAGCACCTGGTAGAA
AACGTTTCACTGTTCCTGTCGGCGGCCGTTATGGCCACAGGAAGTGCCGG
CATGCTATTGTATATCTCGCCTTCCCTGAGTGTTGTCACTCTTTCCGTTG
TTCCCGCCATGGTGTTGGGCGCGGCACAATATTCTAAAATCGTCAAGAAA
TTGAGCCTTGCCCTGTTGAACAGCTTAGCAGTGAGCACCCAGCAGGCGGC
AGAAAAAATGGGTGCCATCCGAATTGTTCGTCACTTTGCTGCCGAGGACC
GGGAGAAAGAGAGATACGGGAATATCATTGATATGTCTCTGGGGCTGGCG
AGGAAACTTGCGGTCTCGGAGGGGGTGTATGTGGCGGCGATCTTCGCAGT
GTCGAATTTTGCGTTGCTGGGGGTGTTGTTTTTAGGGGCGGG back to topCoding sequence (CDS) from alignment at scaffold_5:953045..954586+ >mRNA_2695 ID=mRNA_2695|Name=jgi.p|Nanoce1779_2|581207|organism=Nannochloropsis oceanica|type=CDS|length=327bp|location=Sequence derived from alignment at scaffold_5:953045..954586+ (Nannochloropsis oceanica) ATGCTTAGTTTAATTTGTGCCCATATTTTTCTCGTCCTCACCCACGCTCA CGAAGCCTACGATGACCCAAAACTGAAATGGACAGTAGATAGACTTAAGC GCAAGAAATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTCAT TGGCTGTGGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTTTT GCCGTCCCATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAGCA GCAGCAGCGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCTTC TGCCTTCCCGACGGCCCTTTCGCGTGA back to top
|