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Properties
Property Name | Value |
TranscriptId | 662056 |
Track | FilteredModels2 |
ProteinId | 661970 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_5 | supercontig | scaffold_5:936102..938410 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2689 ID=mRNA_2689|Name=jgi.p|Nanoce1779_2|661970|organism=Nannochloropsis oceanica|type=mRNA|length=1884bp GACAAATCATGCCGTTGAACCAATCGCGTTGAACTGTTTGTTTCAATGGT TTGTTTGCTTGCACTTATGGCCCTTCCACACACAGACCAGCACTCACCTC CCATTCATTACCAAATAAAAGCACTCATGAGTGTGCTTGCAGCCGACGAG GCAGGCGAAGCAGCGGCTGCGGCCTTCAGGGACCACGAGAGGAGAAAGCG GCGACGGCCCGCATTGGAGGAGGGTCACTCCAGCCCTCGTCGTTGTCCTC TTGTTATGAGTTACCAGGAGCATCCCTCGGCGCTTACTATTCACGCAGCG TCCAGTCTAGATCAAGTTCAACGACAACATCGCAACGACCAAACGTCTGG GCCTAAGGCCGCATTAGTCCTCTCGGAATGGCTGGGAAATGCTTTGGTCT GCCCGTCCTCCCCTTCCCAAAATCGCGAGATCCATGTTTCCCTCTTAGGA CAGCTCGTGGGAGCCGATGTAGCCCTTCCACGGCACGTGGCCTTAATTTT GAGTTGTTTGGAGCATAGTTCCGATCGGCGGGTGCGGCTTGAGGTGGTAG CTTTCTTGGCGGGGTTGACTCCAAACAATGTCTTCGAACACCTGCCCGTC TTGGCTGCACGTCTAGTCAGTGACCCATGTGCCACGATACGCATGGCAGT CCTCACAGCACTGTCGGGGCCATTCATTGCTTTATCGCAACCTTATGTGC CTTTGGTAATAGCCTGTCTGGAGGACATGTCGGCCCCGGTCCGCCGAACC GTGCGTGAAGATAGCATGCAAGTGTTGTGCGCCTTGCTCTATTTGACTCG TACGTGCTTTCGGGCGAAGCGATTGCTGGAAGCACCACTGTGGAAGCAAC ACGGGGCAGTGGCCTCCTTAGCTGTGGCGCGCGAGTCCAGCCCTGCCGTA CGTGTCCTGGGTCTACAGTTTCTCACGGATCTTCCGCGGCATCTATGTGC ACAACACGTGGGTATCGCTATTCAGCGTGTGGGCGATGCCCGGCCGGAGG CACAGGCGGCAGCATTGACGTTCTTGCAACGTAACCTTGATCCGGATCTC CTTCGACCTCACGTGCATGCCCTCTTGCAGCTCTTGCGTCCCTATCGGCC ACACTCCTTCTCTTCTTCTTCTTACTCCTCCTATTTGCCTTCCTCACTTT CGGCTCGTTGCGAATTGACGGTACTAAAGTGCCTGCATTTGGTGCCAGAG CGAGCATTGGAGCCTTTCGTTGATGAAATAATTGCAGCTGTTAAAGCAGT GAAGGAGAGCAAGGACGAGAATGGTGGTCTTGACAAGCAGCAGCAGCAGC AGCAGCAGCAGCAGACGACGACATATTTACAATCTGTTCAGACTGCGGCT GTTGATGTGTTTGGATGCATGCGCACTGCAGTAGTTTTGCCGCTGTTAGA AAAAACGTTGATGATATGGGTGTTTGGATCTCTCAAGACCTTACTCATTG TGCCTCCGGCACAGCTAACCGTTCATGCGCATGCGACCGTCAGGATGCTA TTTCCGACAGGAAAGGAAGGCGAGGGAGAGGCGGAGGGGGAGGCGGAGGA TCATAAGGAGGCAGCACGCTGGAGGGAGGCGGCGTTGGAGGTGCTACAGT ATCGGAAGAAAGAAAAGATCGCGCTTGTGTGTAAATCAGTCACAGAAACA ACATCAGAGGGGAAAGAGGAGGGGGAGGAAAATGAGGAAGTGGAGGAAGG GGAGGGGAGTGAGAGCGATAAGGAAAATGAGGCGAAGTTGAGCAATTGCA TTGATTCGAAAAAGCAGGTAGAGAAGGGCAACAGGGTGGGCAGCGCAAAG GAGACGGGGACACTTCCTTTGGAGGCTATGAAAACAGTCAGTCGTTGTGC CGAGGCCCCCCGCGAAAGCGATGGGTGTGGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|661970 >mRNA_2689-protein ID=mRNA_2689-protein|Name=jgi.p|Nanoce1779_2|661970|organism=Nannochloropsis oceanica|type=polypeptide|length=613bp MVCLLALMALPHTDQHSPPIHYQIKALMSVLAADEAGEAAAAAFRDHERR KRRRPALEEGHSSPRRCPLVMSYQEHPSALTIHAASSLDQVQRQHRNDQT SGPKAALVLSEWLGNALVCPSSPSQNREIHVSLLGQLVGADVALPRHVAL ILSCLEHSSDRRVRLEVVAFLAGLTPNNVFEHLPVLAARLVSDPCATIRM AVLTALSGPFIALSQPYVPLVIACLEDMSAPVRRTVREDSMQVLCALLYL TRTCFRAKRLLEAPLWKQHGAVASLAVARESSPAVRVLGLQFLTDLPRHL CAQHVGIAIQRVGDARPEAQAAALTFLQRNLDPDLLRPHVHALLQLLRPY RPHSFSSSSYSSYLPSSLSARCELTVLKCLHLVPERALEPFVDEIIAAVK AVKESKDENGGLDKQQQQQQQQQTTTYLQSVQTAAVDVFGCMRTAVVLPL LEKTLMIWVFGSLKTLLIVPPAQLTVHAHATVRMLFPTGKEGEGEAEGEA EDHKEAARWREAALEVLQYRKKEKIALVCKSVTETTSEGKEEGEENEEVE EGEGSESDKENEAKLSNCIDSKKQVEKGNRVGSAKETGTLPLEAMKTVSR CAEAPRESDGCG* back to topmRNA from alignment at scaffold_5:936102..938410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2689 ID=mRNA_2689|Name=jgi.p|Nanoce1779_2|661970|organism=Nannochloropsis oceanica|type=mRNA|length=2309bp|location=Sequence derived from alignment at scaffold_5:936102..938410+ (Nannochloropsis oceanica) GACAAATCATGCCGTTGAACCAATCGCGTTGAACTGTTTGTTTCAATGGT
TTGTTTGCTTGCACTTATGGCCCTTCCACACACAGACCAGCACTCACCTC
CCATTCATTACCAAATAAAAGCACTCATGAGTGTGCTTGCAGCCGACGAG
GCAGGCGAAGCAGCGGCTGCGGCCTTCAGGGACCACGAGAGGAGAAAGCG
GCGACGGCCCGCATTGGAGGAGGGTCACTCCAGCCCTCGTCGTTGTCCTC
TTGTTATGAGTTACCAGGAGCATCCCTCGGCGCTTACTATTCACGCAGCG
TCCAGTCTAGATCAAGTTCAACGACAACATCGCAACGACCAAACGTCTGG
GCCTAAGGCCGCATTAGTCCTCTCGGAATGGCTGGGAAATGCTTTGGTCT
GCCCGTCCTCCCCTTCCCAAAATCGCGAGATCCATGTTTCCCTCTTAGGA
CAGCTCGTGGGAGCCGATGTAGCCCTTCCACGGCACGTGGCCTTAATTTT
GAGTTGTTTGGAGCATAGTTCCGATCGGCGGGTGCGGCTTGAGGTGGTAG
CTTTCTTGGCGGGGTTGACTCCAAACAATGTCTTCGAACACCTGCCCGTC
TTGGCTGCACGTCTAGTCAGTGACCCATGTGCCACGATACGCATGGCAGT
CCTCACAGCACTGTCGGGGCCATTCATTGCTTTATCGCAACCTTATGTGC
CTTTGGTAATAGCCTGTCTGGAGGACATGTCGGCCCCGGTCCGCCGAAGT
GCAACCAAGGCACTAGTCCAAATCGGGGGGTAACGGCTTGCTTAAGCCAA
AATACATCAATTCTTTGCGATATAATCTCCTCTCTCGTTGCTCAGCCGTG
CGTGAAGATAGCATGCAAGTGTTGTGCGCCTTGCTCTATTTGACTCGTAC
GTGCTTTCGGGCGAAGCGATTGCTGGAAGCACCACTGTGGAAGCAACACG
GGGCAGTGGCCTCCTTAGCTGTGGCGCGCGAGTCCAGCCCTGCCGTACGT
GTCCTGGGTCTACAGTTTCTCACGGATCTTCCGCGGCATCTATGTGCACA
ACACGTGGGTATCGCTATTCAGCGTGTGGGCGATGCCCGGCCGGAGGCAC
AGGCGGCAGCATTGACGTTCTTGCAACGTAACCTTGATCCGGATCTCCTT
CGACCTCACGTGCATGCCCTCTTGCAGCTCTTGCGTCCCTATCGGCCACA
CTCCTTCTCTTCTTCTTCTTACTCCTCCTATTTGCCTTCCTCACTTTCGG
CTCGTTGCGAATTGACGGTACTAAAGTGCCTGCATTTGGTGCCAGAGCGA
GCATTGGAGCCTTTCGTTGATGAAATAATTGCAGCTGTTAAAGCAGTGAA
GGAGAGCAAGGACGAGAATGGTGGTCTTGACAAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGACGACGACATATTTACAATCTGTTCAGACTGCGGCTGTT
GATGTGTTTGGATGCATGCGCACTGCAGTAGTTTTGCCGCTGTTAGAAAA
AACGTTGATGATATGGGTGTTTGGATGTCTCTGTCCTCCTCTTCTTCCAC
CTCTCCATCCTTCTTCTACTCCATCTGCTCCACCTTCCGTGCGAACGACG
GACACCCTATTGGTCAGACAGGCAATGAACATACTACAGCGGGTGCGGAA
CGCCGAAATAAAACAAGCCTGTCTTGCAAGGCTAGCGACATCTTTAAGGG
GGGGGGGGGGGGGGCAGCAACAGCATCCATTCCCACCAAGCACGGGTTCT
GATGGTCCTAGCCGAATCAGGCCCACGGGTCGTGCAAACACACGCAGACA
CCATCACATATGTCCTTCAATGCCCAACCACCGCTTCACGCGTTCGACAC
GAAGCTCTCAAGACCTTACTCATTGTGCCTCCGGCACAGCTAACCGTTCA
TGCGCATGCGACCGTCAGGATGCTATTTCCGACAGGAAAGGAAGGCGAGG
GAGAGGCGGAGGGGGAGGCGGAGGATCATAAGGAGGCAGCACGCTGGAGG
GAGGCGGCGTTGGAGGTGCTACAGTATCGGAAGAAAGAAAAGATCGCGCT
TGTGTGTAAATCAGTCACAGAAACAACATCAGAGGGGAAAGAGGAGGGGG
AGGAAAATGAGGAAGTGGAGGAAGGGGAGGGGAGTGAGAGCGATAAGGAA
AATGAGGCGAAGTTGAGCAATTGCATTGATTCGAAAAAGCAGGTAGAGAA
GGGCAACAGGGTGGGCAGCGCAAAGGAGACGGGGACACTTCCTTTGGAGG
CTATGAAAACAGTCAGTCGTTGTGCCGAGGCCCCCCGCGAAAGCGATGGG
TGTGGATGA back to topCoding sequence (CDS) from alignment at scaffold_5:936102..938410+ >mRNA_2689 ID=mRNA_2689|Name=jgi.p|Nanoce1779_2|661970|organism=Nannochloropsis oceanica|type=CDS|length=5517bp|location=Sequence derived from alignment at scaffold_5:936102..938410+ (Nannochloropsis oceanica) ATGGTTTGTTTGCTTGCACTTATGGCCCTTCCACACACAGACCAGCACTC ACCTCCCATTCATTACCAAATAAAAGCACTCATGAGTGTGCTTGCAGCCG ACGAGGCAGGCGAAGCAGCGGCTGCGGCCTTCAGGGACCACGAGAGGAGA AAGCGGCGACGGCCCGCATTGGAGGAGGGTCACTCCAGCCCTCGTCGTTG TCCTCTTGTTATGAGTTACCAGGAGCATCCCTCGGCGCTTACTATTCACG CAGCGTCCAGTCTAGATCAAGTTCAACGACAACATCGCAACGACCAAACG TCTGGGCCTAAGGCCGCATTAGTCCTCTCGGAATGGCTGGGAAATGCTTT GGTCTGCCCGTCCTCCCCTTCCCAAAATCGCGAGATCCATGTTTCCCTCT TAGGACAGCTCGTGGGAGCCGATGTAGCCCTTCCACGGCACGTGGCCTTA ATTTTGAGTTGTTTGGAGCATAGTTCCGATCGGCGGGTGCGGCTTGAGGT GGTAGCTTTCTTGGCGGGGTTGACTCCAAACAATGTCTTCGAACACCTGC CCGTCTTGGCTGCACGTCTAGTCAGTGACCCATGTGCCACGATACGCATG GCAGTCCTCACAGCACTGTCGGGGCCATTCATTGCTTTATCGCAACCTTA TGTGCCTTTGGTAATAGCCTGTCTGGAGGACATGTCGGCCCCGGTCCGCC GAACCGTGCGTGAAGATAGCATGCAAGTGTTGTGCGCCTTGCTCTATTTG ACTCGTACGTGCTTTCGGGCGAAGCGATTGCTGGAAGCACCACTGTGGAA GCAACACGGGGCAGTGGCCTCCTTAGCTGTGGCGCGCGAGTCCAGCCCTG CCGTACGTGTCCTGGGTCTACAGTTTCTCACGGATCTTCCGCGGCATCTA TGTGCACAACACGTGGGTATCGCTATTCAGCGTGTGGGCGATGCCCGGCC GGAGGCACAGGCGGCAGCATTGACGTTCTTGCAACGTAACCTTGATCCGG ATCTCCTTCGACCTCACGTGCATGCCCTCTTGCAGCTCTTGCGTCCCTAT CGGCCACACTCCTTCTCTTCTTCTTCTTACTCCTCCTATTTGCCTTCCTC ACTTTCGGCTCGTTGCGAATTGACGGTACTAAAGTGCCTGCATTTGGTGC CAGAGCGAGCATTGGAGCCTTTCGTTGATGAAATAATTGCAGCTGTTAAA GCAGTGAAGGAGAGCAAGGACGAGAATGGTGGTCTTGACAAGCAGCAGCA GCAGCAGCAGCAGCAGCAGACGACGACATATTTACAATCTGTTCAGACTG CGGCTGTTGATGTGTTTGGATGCATGCGCACTGCAGTAGTTTTGCCGCTG TTAGAAAAAACGTTGATGATATGGGTGTTTGGATCTCTCAAGACCTTACT CATTGTGCCTCCGGCACAGCTAACCGTTCATGCGCATGCGACCGTCAGGA TGCTATTTCCGACAGGAAAGGAAGGCGAGGGAGAGGCGGAGGGGGAGGCG GAGGATCATAAGGAGGCAGCACGCTGGAGGGAGGCGGCGTTGGAGGTGCT ACAGTATCGGAAGAAAGAAAAGATCGCGCTTGTGTGTAAATCAGTCACAG AAACAACATCAGAGGGGAAAGAGGAGGGGGAGGAAAATGAGGAAGTGGAG GAAGGGGAGGGGAGTGAGAGCGATAAGGAAAATGAGGCGAAGTTGAGCAA TTGCATTGATTCGAAAAAGCAGGTAGAGAAGGGCAACAGGGTGGGCAGCG CAAAGGAGACGGGGACACTTCCTTTGGAGGCTATGAAAACAGTCAGTCGT TGTGCCGAGGCCCCCCGCGAAAGCGATGGGTGTGGATGAATGGTTTGTTT GCTTGCACTTATGGCCCTTCCACACACAGACCAGCACTCACCTCCCATTC ATTACCAAATAAAAGCACTCATGAGTGTGCTTGCAGCCGACGAGGCAGGC GAAGCAGCGGCTGCGGCCTTCAGGGACCACGAGAGGAGAAAGCGGCGACG GCCCGCATTGGAGGAGGGTCACTCCAGCCCTCGTCGTTGTCCTCTTGTTA TGAGTTACCAGGAGCATCCCTCGGCGCTTACTATTCACGCAGCGTCCAGT CTAGATCAAGTTCAACGACAACATCGCAACGACCAAACGTCTGGGCCTAA GGCCGCATTAGTCCTCTCGGAATGGCTGGGAAATGCTTTGGTCTGCCCGT CCTCCCCTTCCCAAAATCGCGAGATCCATGTTTCCCTCTTAGGACAGCTC GTGGGAGCCGATGTAGCCCTTCCACGGCACGTGGCCTTAATTTTGAGTTG TTTGGAGCATAGTTCCGATCGGCGGGTGCGGCTTGAGGTGGTAGCTTTCT TGGCGGGGTTGACTCCAAACAATGTCTTCGAACACCTGCCCGTCTTGGCT GCACGTCTAGTCAGTGACCCATGTGCCACGATACGCATGGCAGTCCTCAC AGCACTGTCGGGGCCATTCATTGCTTTATCGCAACCTTATGTGCCTTTGG TAATAGCCTGTCTGGAGGACATGTCGGCCCCGGTCCGCCGAACCGTGCGT GAAGATAGCATGCAAGTGTTGTGCGCCTTGCTCTATTTGACTCGTACGTG CTTTCGGGCGAAGCGATTGCTGGAAGCACCACTGTGGAAGCAACACGGGG CAGTGGCCTCCTTAGCTGTGGCGCGCGAGTCCAGCCCTGCCGTACGTGTC CTGGGTCTACAGTTTCTCACGGATCTTCCGCGGCATCTATGTGCACAACA CGTGGGTATCGCTATTCAGCGTGTGGGCGATGCCCGGCCGGAGGCACAGG CGGCAGCATTGACGTTCTTGCAACGTAACCTTGATCCGGATCTCCTTCGA CCTCACGTGCATGCCCTCTTGCAGCTCTTGCGTCCCTATCGGCCACACTC CTTCTCTTCTTCTTCTTACTCCTCCTATTTGCCTTCCTCACTTTCGGCTC GTTGCGAATTGACGGTACTAAAGTGCCTGCATTTGGTGCCAGAGCGAGCA TTGGAGCCTTTCGTTGATGAAATAATTGCAGCTGTTAAAGCAGTGAAGGA GAGCAAGGACGAGAATGGTGGTCTTGACAAGCAGCAGCAGCAGCAGCAGC AGCAGCAGACGACGACATATTTACAATCTGTTCAGACTGCGGCTGTTGAT GTGTTTGGATGCATGCGCACTGCAGTAGTTTTGCCGCTGTTAGAAAAAAC GTTGATGATATGGGTGTTTGGATCTCTCAAGACCTTACTCATTGTGCCTC CGGCACAGCTAACCGTTCATGCGCATGCGACCGTCAGGATGCTATTTCCG ACAGGAAAGGAAGGCGAGGGAGAGGCGGAGGGGGAGGCGGAGGATCATAA GGAGGCAGCACGCTGGAGGGAGGCGGCGTTGGAGGTGCTACAGTATCGGA AGAAAGAAAAGATCGCGCTTGTGTGTAAATCAGTCACAGAAACAACATCA GAGGGGAAAGAGGAGGGGGAGGAAAATGAGGAAGTGGAGGAAGGGGAGGG GAGTGAGAGCGATAAGGAAAATGAGGCGAAGTTGAGCAATTGCATTGATT CGAAAAAGCAGGTAGAGAAGGGCAACAGGGTGGGCAGCGCAAAGGAGACG GGGACACTTCCTTTGGAGGCTATGAAAACAGTCAGTCGTTGTGCCGAGGC CCCCCGCGAAAGCGATGGGTGTGGATGAATGGTTTGTTTGCTTGCACTTA TGGCCCTTCCACACACAGACCAGCACTCACCTCCCATTCATTACCAAATA AAAGCACTCATGAGTGTGCTTGCAGCCGACGAGGCAGGCGAAGCAGCGGC TGCGGCCTTCAGGGACCACGAGAGGAGAAAGCGGCGACGGCCCGCATTGG AGGAGGGTCACTCCAGCCCTCGTCGTTGTCCTCTTGTTATGAGTTACCAG GAGCATCCCTCGGCGCTTACTATTCACGCAGCGTCCAGTCTAGATCAAGT TCAACGACAACATCGCAACGACCAAACGTCTGGGCCTAAGGCCGCATTAG TCCTCTCGGAATGGCTGGGAAATGCTTTGGTCTGCCCGTCCTCCCCTTCC CAAAATCGCGAGATCCATGTTTCCCTCTTAGGACAGCTCGTGGGAGCCGA TGTAGCCCTTCCACGGCACGTGGCCTTAATTTTGAGTTGTTTGGAGCATA GTTCCGATCGGCGGGTGCGGCTTGAGGTGGTAGCTTTCTTGGCGGGGTTG ACTCCAAACAATGTCTTCGAACACCTGCCCGTCTTGGCTGCACGTCTAGT CAGTGACCCATGTGCCACGATACGCATGGCAGTCCTCACAGCACTGTCGG GGCCATTCATTGCTTTATCGCAACCTTATGTGCCTTTGGTAATAGCCTGT CTGGAGGACATGTCGGCCCCGGTCCGCCGAACCGTGCGTGAAGATAGCAT GCAAGTGTTGTGCGCCTTGCTCTATTTGACTCGTACGTGCTTTCGGGCGA AGCGATTGCTGGAAGCACCACTGTGGAAGCAACACGGGGCAGTGGCCTCC TTAGCTGTGGCGCGCGAGTCCAGCCCTGCCGTACGTGTCCTGGGTCTACA GTTTCTCACGGATCTTCCGCGGCATCTATGTGCACAACACGTGGGTATCG CTATTCAGCGTGTGGGCGATGCCCGGCCGGAGGCACAGGCGGCAGCATTG ACGTTCTTGCAACGTAACCTTGATCCGGATCTCCTTCGACCTCACGTGCA TGCCCTCTTGCAGCTCTTGCGTCCCTATCGGCCACACTCCTTCTCTTCTT CTTCTTACTCCTCCTATTTGCCTTCCTCACTTTCGGCTCGTTGCGAATTG ACGGTACTAAAGTGCCTGCATTTGGTGCCAGAGCGAGCATTGGAGCCTTT CGTTGATGAAATAATTGCAGCTGTTAAAGCAGTGAAGGAGAGCAAGGACG AGAATGGTGGTCTTGACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGACG ACGACATATTTACAATCTGTTCAGACTGCGGCTGTTGATGTGTTTGGATG CATGCGCACTGCAGTAGTTTTGCCGCTGTTAGAAAAAACGTTGATGATAT GGGTGTTTGGATCTCTCAAGACCTTACTCATTGTGCCTCCGGCACAGCTA ACCGTTCATGCGCATGCGACCGTCAGGATGCTATTTCCGACAGGAAAGGA AGGCGAGGGAGAGGCGGAGGGGGAGGCGGAGGATCATAAGGAGGCAGCAC GCTGGAGGGAGGCGGCGTTGGAGGTGCTACAGTATCGGAAGAAAGAAAAG ATCGCGCTTGTGTGTAAATCAGTCACAGAAACAACATCAGAGGGGAAAGA GGAGGGGGAGGAAAATGAGGAAGTGGAGGAAGGGGAGGGGAGTGAGAGCG ATAAGGAAAATGAGGCGAAGTTGAGCAATTGCATTGATTCGAAAAAGCAG GTAGAGAAGGGCAACAGGGTGGGCAGCGCAAAGGAGACGGGGACACTTCC TTTGGAGGCTATGAAAACAGTCAGTCGTTGTGCCGAGGCCCCCCGCGAAA GCGATGGGTGTGGATGA back to top
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