Properties
| Property Name | Value |
|---|
| TranscriptId | 581236 |
| Track | FilteredModels2 |
| ProteinId | 581150 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:909062..910685 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2677 ID=mRNA_2677|Name=jgi.p|Nanoce1779_2|581150|organism=Nannochloropsis oceanica|type=mRNA|length=1624bp
ACCGGCGCCGATCTTAAGCTTGTGGACTCTTGCATGCCTTCAATAGTGGA
AGAGGGAGAGGAGGTGGAGGAAGGGGGGGAGGAGGAATGGATAGTATCAA
AGAGCCCTCTGGTGATTGGCCGGGGGTCTGCTGATTGCAACGATCCGCTT
CCTTTCTTGGTGATGGACAAGGAGAAGGAAGGGTGGCGAGGGGTGTCGAA
TAGCCCAAGAACGGTAGAGAGCGGAAGAGGTGTTTCCTCAGTTGGTTTCA
GCGTTGCAGATGTCCGCTTATTTTGATCTGAAGTCGAGGCGGAGGAAGAG
GATGAGGAGGAAAAAGGTGGGGAAGCTTGGGTGTCAAAGAGCCCTTGTAC
AGTACGGGAAGGCTCGACTTCGTCTTTTCTGGGCGCGAAAGCTGCAAATG
CCCGCGAACTTTCCTGCAAGAAGGGGAAGGCGGAGGAAGAGGTGGAGGAA
GGGACAGAAGAGGAGGATAGGACGGTGTCAAAAAGCCCCTTGAAGGTCCG
GGATGGATGGGAATCCTCTTCCTCTTCTTGCATTTCTTTCTTTGGCACAT
GCCTGACATGCGTTGTCGTCTGGGTATGGGAAAGGGGAGGCTGTTGCGCT
GTTTGAAAGAACTCTGTGGATGTGAAGTCTGTCATTGTACGTGGGTTGGA
TTCGGGCGTGGCGGTAGTGGCTGCCAGAACGGAGGAGGAAGAGGGGGGGG
AGGAGGAGATGGTCGGAGTACAAGGAGGAGGCTGCTCAAGCTCGCTAGCT
GTAGCAGTGGCAAAAAACTGGCCTGGCCGTGGGCTCGTTTCCGACACTGC
AGTGGTAGATGCGAAAAGGGAGGAGAAGGAAAAGGTCACTTTGGGGGTGA
AAGGAGACTGGGTCGCAGTCTGGTAGAATCTTGTGGAGGTAAGATCCTCA
GGCGATGCAGTCCTTGTTATAGATAGAGCAGAGGAGGAGGAGGGAGAGAA
GGTAATAGTAAAAGTAGTGGAAGGGGGCTGGACATCAGTGTTGCCGGACT
GGGCAGTTGTATCGGTCAGATCCGCGCGGCGTTGTGCTTGCGTTTCTTGT
GAAGAGACGGAAGGAGAGGTGATAGAGGAGGAGGTGGGGGGGGGGGGAAG
AAAGGAAGACAGGCTCCATCGGGCGCTGTGTCTCTCGTAGGGAGACAGAA
GGACCGAAGGAAGATGCCGATGAGGTGGAGGAAGGCAGAAAGGTAACCGT
TTGACTTGGAAAAGGCGGGATCTGGGAGATACCCTTGACAGTATTGGAAT
ATGTCTGCGCTCGTGAGCTTCCCTCGTCCTCTTCCCGCATTGTCGAAGTG
GCCGTTGAAGAGGGGGAGGAAGACGCTATTGGGTTAGCAGGAGGGTGAAC
GGTGTCGAACAGCCCCATGATGGTTCGTGGCACTTGCCGGGGCAGCATGG
GCCCGGTAGTCGATGTAGCTGGTGTTGCCGGGCAAGGCGTATTGGAGGTA
GACTGTACTGTGTCGAACAGACCCATGATGGTCCGCGACACGTCCGCTGT
GGGCGCAGGCGTCGTAGTGGAGGATGTGGACGTCATCATCGGACTGGCTT
GAGGCTGAACGGTGTCAAATAGTCCCATGGCTGTCTGAGAGGCCTGTTGA
GGCTGGGCTGTGTCAAGCAAGCGC back to topprotein sequence of jgi.p|Nanoce1779_2|581150 >mRNA_2677-protein ID=mRNA_2677-protein|Name=jgi.p|Nanoce1779_2|581150|organism=Nannochloropsis oceanica|type=polypeptide|length=140bp
MGILFLFLHFFLWHMPDMRCRLGMGKGRLLRCLKELCGCEVCHCTWVGFG
RGGSGCQNGGGRGGGGGDGRSTRRRLLKLASCSSGKKLAWPWARFRHCSG
RCEKGGEGKGHFGGERRLGRSLVESCGGKILRRCSPCYR* back to topmRNA from alignment at scaffold_5:909062..910685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2677 ID=mRNA_2677|Name=jgi.p|Nanoce1779_2|581150|organism=Nannochloropsis oceanica|type=mRNA|length=1624bp|location=Sequence derived from alignment at scaffold_5:909062..910685- (Nannochloropsis oceanica)
ACCGGCGCCGATCTTAAGCTTGTGGACTCTTGCATGCCTTCAATAGTGGA
AGAGGGAGAGGAGGTGGAGGAAGGGGGGGAGGAGGAATGGATAGTATCAA
AGAGCCCTCTGGTGATTGGCCGGGGGTCTGCTGATTGCAACGATCCGCTT
CCTTTCTTGGTGATGGACAAGGAGAAGGAAGGGTGGCGAGGGGTGTCGAA
TAGCCCAAGAACGGTAGAGAGCGGAAGAGGTGTTTCCTCAGTTGGTTTCA
GCGTTGCAGATGTCCGCTTATTTTGATCTGAAGTCGAGGCGGAGGAAGAG
GATGAGGAGGAAAAAGGTGGGGAAGCTTGGGTGTCAAAGAGCCCTTGTAC
AGTACGGGAAGGCTCGACTTCGTCTTTTCTGGGCGCGAAAGCTGCAAATG
CCCGCGAACTTTCCTGCAAGAAGGGGAAGGCGGAGGAAGAGGTGGAGGAA
GGGACAGAAGAGGAGGATAGGACGGTGTCAAAAAGCCCCTTGAAGGTCCG
GGATGGATGGGAATCCTCTTCCTCTTCTTGCATTTCTTTCTTTGGCACAT
GCCTGACATGCGTTGTCGTCTGGGTATGGGAAAGGGGAGGCTGTTGCGCT
GTTTGAAAGAACTCTGTGGATGTGAAGTCTGTCATTGTACGTGGGTTGGA
TTCGGGCGTGGCGGTAGTGGCTGCCAGAACGGAGGAGGAAGAGGGGGGGG
AGGAGGAGATGGTCGGAGTACAAGGAGGAGGCTGCTCAAGCTCGCTAGCT
GTAGCAGTGGCAAAAAACTGGCCTGGCCGTGGGCTCGTTTCCGACACTGC
AGTGGTAGATGCGAAAAGGGAGGAGAAGGAAAAGGTCACTTTGGGGGTGA
AAGGAGACTGGGTCGCAGTCTGGTAGAATCTTGTGGAGGTAAGATCCTCA
GGCGATGCAGTCCTTGTTATAGATAGAGCAGAGGAGGAGGAGGGAGAGAA
GGTAATAGTAAAAGTAGTGGAAGGGGGCTGGACATCAGTGTTGCCGGACT
GGGCAGTTGTATCGGTCAGATCCGCGCGGCGTTGTGCTTGCGTTTCTTGT
GAAGAGACGGAAGGAGAGGTGATAGAGGAGGAGGTGGGGGGGGGGGGAAG
AAAGGAAGACAGGCTCCATCGGGCGCTGTGTCTCTCGTAGGGAGACAGAA
GGACCGAAGGAAGATGCCGATGAGGTGGAGGAAGGCAGAAAGGTAACCGT
TTGACTTGGAAAAGGCGGGATCTGGGAGATACCCTTGACAGTATTGGAAT
ATGTCTGCGCTCGTGAGCTTCCCTCGTCCTCTTCCCGCATTGTCGAAGTG
GCCGTTGAAGAGGGGGAGGAAGACGCTATTGGGTTAGCAGGAGGGTGAAC
GGTGTCGAACAGCCCCATGATGGTTCGTGGCACTTGCCGGGGCAGCATGG
GCCCGGTAGTCGATGTAGCTGGTGTTGCCGGGCAAGGCGTATTGGAGGTA
GACTGTACTGTGTCGAACAGACCCATGATGGTCCGCGACACGTCCGCTGT
GGGCGCAGGCGTCGTAGTGGAGGATGTGGACGTCATCATCGGACTGGCTT
GAGGCTGAACGGTGTCAAATAGTCCCATGGCTGTCTGAGAGGCCTGTTGA
GGCTGGGCTGTGTCAAGCAAGCGC back to topCoding sequence (CDS) from alignment at scaffold_5:909062..910685- >mRNA_2677 ID=mRNA_2677|Name=jgi.p|Nanoce1779_2|581150|organism=Nannochloropsis oceanica|type=CDS|length=420bp|location=Sequence derived from alignment at scaffold_5:909062..910685- (Nannochloropsis oceanica)
ATGGGAATCCTCTTCCTCTTCTTGCATTTCTTTCTTTGGCACATGCCTGA
CATGCGTTGTCGTCTGGGTATGGGAAAGGGGAGGCTGTTGCGCTGTTTGA
AAGAACTCTGTGGATGTGAAGTCTGTCATTGTACGTGGGTTGGATTCGGG
CGTGGCGGTAGTGGCTGCCAGAACGGAGGAGGAAGAGGGGGGGGAGGAGG
AGATGGTCGGAGTACAAGGAGGAGGCTGCTCAAGCTCGCTAGCTGTAGCA
GTGGCAAAAAACTGGCCTGGCCGTGGGCTCGTTTCCGACACTGCAGTGGT
AGATGCGAAAAGGGAGGAGAAGGAAAAGGTCACTTTGGGGGTGAAAGGAG
ACTGGGTCGCAGTCTGGTAGAATCTTGTGGAGGTAAGATCCTCAGGCGAT
GCAGTCCTTGTTATAGATAG back to top
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