jgi.p|Nanoce1779_2|581143, mRNA_2674 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|581143
Unique Name	mRNA_2674
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4881
Alignment location	scaffold_5:900406..905554 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	581229
Track	FilteredModels2
ProteinId	581143

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_5	supercontig	scaffold_5:900406..905554 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581143	gene_2674	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581143	mRNA_2674-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_2674	CDS_2674	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_5:900406..905554+
coding sequence from alignment at scaffold_5:900406..905554+

mRNA sequence

>mRNA_2674 ID=mRNA_2674|Name=jgi.p|Nanoce1779_2|581143|organism=Nannochloropsis oceanica|type=mRNA|length=4881bp
AGAGAGAATCATGCCGCCATGGGGAGCAGGGGCGGCGGCGGGAGCTGGTG
ATGTAGACGACGATGACCATCATCATTTGATAGAGCGAAGCGAGGAAGGC
CGGATGAGGCGGGAGCACCTGAGCAATCACGACCGGGAGACAGAAGCTTT
ATGGCAGCAGCAGGCGAAGCGCTTCGGCAAGGGCAGCTCTATGCGCCGGG
TCATTACAGCCCTGATGACGGGGACTTTGCTGCTGTTGTTGATTAGCCTG
ATGCATAGAAATTTGGACAAAAGCGACCTAAGCGGGGACACCGACGGCCG
TGGCGTGGCCTTCACGAAAGAGCAACTGGACGCGGAGGCGGCCACGACGG
CAGCAGCACTGGCAGGAGCGGCTGCCGAAGAAAAGGAACTCAAGAAGCAG
TTGGACGCCGAGACGCCCAAGCGACACAGAGTGAAAGATGAAGCGTTTGC
AGTCAAGGAGGACTTGCAGATCTTCAAGAAGGCAGCGGCAGATGCGGAGG
CTGCTGCAGTTGCTGTGGTAGAAAAGATGGCGGATAAGGAGGAAGTAGCG
TCTGTAGCATCTGCTGTGGCGGCTGCGAAAACGAAGGAAGGCGCAAAACA
GAATAGGTATGCAAATACAACGACAATGACTGTTGCAGTAAGTGAGAAAG
AGGGGGGGAAGCCAAAGGTTGAAATTGACGAGGCAGCGGCAGCAGCAGTA
GCTAAAAATAAGATGAAGGTGAAAGCATCGACAACGGTAGCGGCAGCAGA
TCAGAATGAAGTGAAATCACGGAATACGGAGAAGGACGAAGAAGCTATAA
TAGCGGCAGCTATATCGGCGGCGAAAAAGCATCAAAAGAAGGAAGAGGAG
GATAAGAACGGCTCGGCGGCAGCAGCGCTGATAGAAAAGGATGACGTAGA
TGTGGAGGAGAAAGTCGCCACAATAAAGCCAGAGTCCGCCAAGAAATCTG
CTAAGGCCAAAGCACCCGTGGAGTCCAGCAGCTCCCTCAAATCGATCACC
ACCACTGCCATCGGCAGCAGTAGCAGCAGCAATGATGACAACGACACTAC
CAATACCCCTAACGTCCCTGCCGTTAACCTTTCTACTCTGGATGCCGCCG
AGGAACAAACCAAGCTAATGGCCGCCAGGACCCTCGTCGCCTCCGCCCTC
CTCGCCCTCCAAGAAGACCATACGCCGGAGCATGCCCAATCACTTTTCGA
TTCCCTTCACTTCCACAACCGAACCTATGTCAAACACAAGCTCATTCGCG
CCCTGCTCGGCCAAAACGGCAGTCCCCATAAAGCCGAAAGCGAACACGAC
TTTATCATGTCCTTTGCCGGTACATCCGTCACGGCCGGCCACGACAACTT
CTTCCAGCAATCCTACCCCATCGTCTTGCGAAAAATCTTACGTAAATCCT
ACGCTGCCGCGGGCCTTAAATTAGAAGTTCGAAACCACGCCATGGGGAAC
AACCCTTCTATTCCCGCAGCCTTTTGTGTGAAGAGTCAATTAGGCGAAGA
TACAGACGTGGCTGCCTGGGAGTTCGGGATGATGGTAGAGGGGCACTTAC
AGAATGCGTTTGTTGAGGAATGGATGCGCAATGCCCTCTACCTACCCAAA
CGCCCCGCTCTTTTGATGGTGGACCAGGGAGAGGGAACTAGAAAACCGAG
TGCAGATGGAGTACCGCCAACCGTCCCGAGGGCAGGGTTTCCATCCGTGT
GGGGGTTTGGAGGGCAGAAAGGGAGCCTATTTGAGTATTATTCAGAGTAT
GGTGTGCATGCTCAAGCAATGTATGAGGCGCTTTGGACGCTCGATCACCT
ACCACAGTATAATTTCAAGGCCTTGGTCCAGGACGACAAGCCAACACCGA
GACCCGCTGACTGGCACCCGGGGCCGGGGGAGCACTTGCTTCGCGCGCAG
ATTCTGGGCCACCATTACTTAACGCTGTTGGACGATGCAATGGTCGACGT
GCAGGCTGCGCTCGAAGCAGACAGCGCGGCTGGGGTGGACATTGGGACAG
CAGCCACTTCCCAGGTACGGGCACTGCTGGCATCCACCAAACCCGCCGCT
GGTGCTGCAGCTGCCACTGGTACTGCCGTCACCGCTGATTGGACTAGTGG
GGACAAAATAAAGGACATCCCTCCTCCTTTGTACTGCGATCCTCTTTTCT
GCGGGTCTCCTGCGTCGTGCGCCATGACCTTCGAGCCCAAACAACAATCC
TCCCTGCTCGACCTGGTCTTGTCGCCCAAAGACCTAAGGGAGGCCTCGCC
GGCTATTGATCCTCAAGATAGTAAAAAATGGCATGTCCAGCTTTTTGAAG
CAGACCATGACGCGGCAAAATTCTCTCAAGACCAGGGCTTTGAATACCTC
GACATGAAGTACGTCTTGCAAGGGAACAGGGACGCGGGCCCGCTGACCCT
GGCCGTGCAGACACAAACCAAGCGGCATCTCCTCTTCTGCCAGCCGCCGA
GTGTTGATCGCCGCATGCCTAATCATTGTGGAAATTTGGGGGCCGATGCC
GCGTTCACGATTGATGATGTTCCGATGGGTTTGGAGATGGACACCAATTT
CTACCTTCAGCACACCATCAAGTCGCCTACTTGCTGGTCGACACAGGGGA
TGGTCGAGGCGGGGTCACACGTTATCAAGATAATGCCCACTAATCCCAAG
GGCAAGTATGTTGTGTTATCGGCACTCATTTGGTATTAGTAAGAAGGGAA
GGAGGGATGGGGAGAGTTGTGTGAGTGCACGCAAGCATACGAGCGAGCCT
CGTATCTAGTCAACAAAATGTAGTGAAAAGAATCATATGTACAATGCGTA
CTTAGTTGGAATGTGACGGCATGGTTTCTACTTCTCAAATCCTTTCCGCA
CGCTAGGGGGGGAAGGAGGTCAAGCTTTTGAATTTCAAGACTCAAAAGTC
AACGGCTTACCTGGCTGGCCCTTTGTTCTCTCGCTGCCCAACGAGGGGTC
TAGATTGTGTCTTGCATGCGTGCAAGCCACAGATCAGCTACCGTGCATCC
GCTTTATAATTTTTCTCTTCGTCTGAGAAACATCGAGGACAAGACACGCG
AGCACCCTACGGAAGACAGAGGTACGTGAGTGGGGATAAGTATAACGTGC
AAAGCGACGTAGATGCAATACGGCCTAGGCTTGCGGAGTATGAGTCAATG
GAGTAGGCTGCGGGCTTGCGCTTGCGGCGGGGTATTGTGGCGTCCTGGCA
TGCTCATGCGTCTCCGGGAAAGTGCGTGCCACGGCTCAATTCCATGCATA
CTTGTATCTAGATCGGGGTCTTTTCGATTTACTGCACGCCTACCGTCGTT
TACGAACAGGCTGTATGGGTGCCTGAGCGTATGGGCTATGTTGTCCGTTC
ACACGAAAGATGACACAAACATGCTAATTCCCCTTCTCCTTCTCCACTCC
CCTCCCTAGGCCTCACCGTAGGCGACGATCCTTTCTCAATTATCCGCCTC
AACGCTAAGCAGCGAAGTTTGTAGGGTGGTCGGCGTTTGGGAACTTGAGC
GGCCCGACGAGCGGCGGCGTTTTTGAAAGGCTCAAATTACTATGAAAACC
ATGCAGCTCGAGCAACGACGGGTTCGGCCTCAAAACAGATTCGATGACAT
GTACCGGGATACGGAGGCGCGTCAAAACCATTTTGCTGGCTTAGCTAAAC
GTTTCCGCAGCGCCGAGGGCAATATCCAGGCGGTTTTGCATGGAGCAGGG
CGTTCGTGCTCGGCCTCCCCTACGCGGAAGGGCAAGAGCAACACCTGCAG
CAGCGAGAAGCGGGCCCGTGCAAGTCAATACGATGAGACAGAGGATCGTA
CCTTCATACCACATTTGTATGCGCACAAGTACGGCTCCGAATCAGAGGAG
CAGCTGCCTATCAATGAGCGCTTGTCGCGGTACCAAGCCGCTCGAAAGCT
TCGACTGGAGATGCTACGAGCGCAGCGGGAGAGCGAGGAGACCCGTGGAA
TGGGTTCCATCCCCCAACTGATATCGAACAGTCAGGCACGTGATCGTGCT
CTCCGGGCACGCAGCGCCTCGCCCCTCCCTTGTTCGAGAGGGGGACGAAC
GGCCAGCAACGTGTTTGAGCGGCTGTCACGGGATGGGACGGCGCGTGTCG
CCCGGCAAAAGGCTGCCAAGTACCAAGATCCTGAATGCACGCTCACCTCA
GGCTTGTCTACGCGGAGTACACGCTCTGCATCTCCTCTGCCGTGGTTGCG
GTCGGCATCGCCCAAGAAGAAACCGCTTATTGCCGTGCGTTTTCAAGAGC
ACGAAAACGTGCAAAGAGCACGACGGAAGCGGCTGGTGAAGCGGATCGAG
GATGAACGCGCGGCACAATACACCTTCATGCCTAAGGTCCTTGAAAGCAA
GCGCAGCTACCACGATGGCAGTGGCAGCAGTATGGCAAAGACCACCCAGC
GCTCCTCCTCTTCGCAACACCAACGCCAACACCATTCCCCCTCATGCAAG
ACGACAGGCGAGGTTGAGTTTGATCGCTGCACTTTCAAGCCCCGCATTGT
TTCACGCAAGTCAGAATGTGTCCCGAAAGGTAGCGTCGTAGAGCGGCTCT
TGTTCGAGGGGCAAGAGGCGAAGGAGAAGCTAGAGCGCCTGCGTCGCATT
CGAGAAGAGCAAGAAATGCGCCCATGCACTTTCAAGCCTACTATCCCTCG
ATATGAGTCTCCTCATCGACGTTCCTCGCCTTCCACCCCAAGAGTGATGG
TGGTGAGATCACCGGTATCTCGCACACACCCCTGCCAGCATGTGCATCAT
CACCATCATTCCTCGCCTACTATATCGGCAGGTCCCATCCGCGGCAACCA
CAGTTCAGTTGTCCCCTCCTCCCCACCTCGCTACCACCATCAGCAGCAAC
ATCACCACCGCCACCAGCCGCAAAGCGAGGA

protein sequence of jgi.p|Nanoce1779_2|581143

>mRNA_2674-protein ID=mRNA_2674-protein|Name=jgi.p|Nanoce1779_2|581143|organism=Nannochloropsis oceanica|type=polypeptide|length=893bp
MPPWGAGAAAGAGDVDDDDHHHLIERSEEGRMRREHLSNHDRETEALWQQ
QAKRFGKGSSMRRVITALMTGTLLLLLISLMHRNLDKSDLSGDTDGRGVA
FTKEQLDAEAATTAAALAGAAAEEKELKKQLDAETPKRHRVKDEAFAVKE
DLQIFKKAAADAEAAAVAVVEKMADKEEVASVASAVAAAKTKEGAKQNRY
ANTTTMTVAVSEKEGGKPKVEIDEAAAAAVAKNKMKVKASTTVAAADQNE
VKSRNTEKDEEAIIAAAISAAKKHQKKEEEDKNGSAAAALIEKDDVDVEE
KVATIKPESAKKSAKAKAPVESSSSLKSITTTAIGSSSSSNDDNDTTNTP
NVPAVNLSTLDAAEEQTKLMAARTLVASALLALQEDHTPEHAQSLFDSLH
FHNRTYVKHKLIRALLGQNGSPHKAESEHDFIMSFAGTSVTAGHDNFFQQ
SYPIVLRKILRKSYAAAGLKLEVRNHAMGNNPSIPAAFCVKSQLGEDTDV
AAWEFGMMVEGHLQNAFVEEWMRNALYLPKRPALLMVDQGEGTRKPSADG
VPPTVPRAGFPSVWGFGGQKGSLFEYYSEYGVHAQAMYEALWTLDHLPQY
NFKALVQDDKPTPRPADWHPGPGEHLLRAQILGHHYLTLLDDAMVDVQAA
LEADSAAGVDIGTAATSQVRALLASTKPAAGAAAATGTAVTADWTSGDKI
KDIPPPLYCDPLFCGSPASCAMTFEPKQQSSLLDLVLSPKDLREASPAID
PQDSKKWHVQLFEADHDAAKFSQDQGFEYLDMKYVLQGNRDAGPLTLAVQ
TQTKRHLLFCQPPSVDRRMPNHCGNLGADAAFTIDDVPMGLEMDTNFYLQ
HTIKSPTCWSTQGMVEAGSHVIKIMPTNPKGKYVVLSALIWY*

mRNA from alignment at scaffold_5:900406..905554+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2674 ID=mRNA_2674|Name=jgi.p|Nanoce1779_2|581143|organism=Nannochloropsis oceanica|type=mRNA|length=5149bp|location=Sequence derived from alignment at scaffold_5:900406..905554+ (Nannochloropsis oceanica)
AGAGAGAATCATGCCGCCATGGGGAGCAGGGGCGGCGGCGGGAGCTGGTG
ATGTAGACGACGATGACCATCATCATTTGATAGAGCGAAGCGAGGAAGGC
CGGATGAGGCGGGAGCACCTGAGCAATCACGACCGGGAGACAGAAGCTTT
ATGGCAGCAGCAGGCGAAGCGCTTCGGCAAGGGCAGCTCTATGCGCCGGG
TCATTACAGCCCTGATGACGGGGACTTTGCTGCTGTTGTTGATTAGCCTG
ATGCATAGAAATTTGGACAAAAGCGACCTAAGCGGGGACACCGACGGCCG
TGGCGTGGCCTTCACGAAAGAGCAACTGGACGCGGAGGCGGCCACGACGG
CAGCAGCACTGGCAGGAGCGGCTGCCGAAGAAAAGGAACTCAAGAAGCAG
TTGGACGCCGAGACGCCCAAGCGACACAGAGTGAAAGATGAAGCGTTTGC
AGTCAAGGAGGACTTGCAGATCTTCAAGAAGGCAGCGGCAGATGCGGAGG
CTGCTGCAGTTGCTGTGGTAGAAAAGATGGCGGATAAGGAGGAAGTAGCG
TCTGTAGCATCTGCTGTGGCGGCTGCGAAAACGAAGGAAGGCGCAAAACA
GAATAGGTATGCAAATACAACGACAATGACTGTTGCAGTAAGTGAGAAAG
AGGGGGGGAAGCCAAAGGTTGAAATTGACGAGGCAGCGGCAGCAGCAGTA
GCTAAAAATAAGATGAAGGTGAAAGCATCGACAACGGTAGCGGCAGCAGA
TCAGAATGAAGTGAAATCACGGAATACGGAGAAGGACGAAGAAGCTATAA
TAGCGGCAGCTATATCGGCGGCGAAAAAGCATCAAAAGAAGGAAGAGGAG
GATAAGAACGGCTCGGCGGCAGCAGCGCTGATAGAAAAGGATGACGTAGA
TGTGGAGGAGAAAGTCGCCACAATAAAGCCAGAGTCCGCCAAGAAATCTG
CTAAGGCCAAAGCACCCGTGGAGTCCAGCAGCTCCCTCAAATCGATCACC
ACCACTGCCATCGGCAGCAGTAGCAGCAGCAATGATGACAACGACACTAC
CAATACCCCTAACGTCCCTGCCGTTAACCTTTCTACTCTGGATGCCGCCG
AGGAACAAACCAAGCTAATGGCCGCCAGGACCCTCGTCGCCTCCGCCCTC
CTCGCCCTCCAAGAAGACCATACGCCGGAGCATGCCCAATCACTTTTCGA
TTCCCTTCACTTCCACAACCGAACCTATGTCAAACACAAGCTCATTCGCG
CCCTGCTCGGCCAAAACGGCAGTCCCCATAAAGCCGAAAGCGAACACGAC
TTTATCATGTCCTTTGCCGGTACATCCGTCACGGCCGGCCACGACAACTT
CTTCCAGCAATCCTACCCCATCGTCTTGCGAAAAATCTTACGTAAATCCT
ACGCTGCCGCGGGCCTTAAATTAGAAGTTCGAAACCACGCCATGGGGAAC
AACCCTTCTATTCCCGCAGCCTTTTGTGTGAAGAGTCAATTAGGCGAAGA
TACAGACGTGGCTGCCTGGGAGTTCGGGATGATGGTAGAGGGGCACTTAC
AGAATGCGTTTGTTGAGGAATGGATGCGCAATGCCCTCTACCTACCCAAA
CGCCCCGCTCTTTTGATGGTGGACCAGGGAGAGGGAACTAGAAAACCGAG
TGCAGATGGAGTACCGCCAACCGTCCCGAGGGCAGGGTTTCCATCCGTGT
GGGGGTTTGGAGGGCAGAAAGGGAGCCTATTTGAGTATTATTCAGAGTAT
GGTGTGCATGCTCAAGCAATGTATGAGGCGCTTTGGACGCTCGATCACCT
ACCACAGTATAATTTCAAGGCCTTGGTCCAGGTTCGTATTTTCTTTCCTC
CTTTACCCTTCCTCCATCCCTTCCTGTGTCTCTCCCTCTATTCTGTCAAT
TATCGTATGGATCTACCTTTGCTTAAGAATTACATTGTCCTTTGTCTCTA
CCCTCGCTCGCTCTCTTCCTTCCTCCCTCCTTCCGATAGGACGACAAGCC
AACACCGAGACCCGCTGACTGGCACCCGGGGCCGGGGGAGCACTTGCTTC
GCGCGCAGATTCTGGGCCACCATTACTTAACGCTGTTGGACGATGCAATG
GTCGACGTGCAGGCTGCGCTCGAAGCAGACAGCGCGGCTGGGGTGGACAT
TGGGACAGCAGCCACTTCCCAGGTACGGGCACTGCTGGCATCCACCAAAC
CCGCCGCTGGTGCTGCAGCTGCCACTGGTACTGCCGTCACCGCTGATTGG
ACTAGTGGGGACAAAATAAAGGACATCCCTCCTCCTTTGTACTGCGATCC
TCTTTTCTGCGGGTCTCCTGCGTCGTGCGCCATGACCTTCGAGCCCAAAC
AACAATCCTCCCTGCTCGACCTGGTCTTGTCGCCCAAAGACCTAAGGGAG
GCCTCGCCGGCTATTGATCCTCAAGATAGTAAAAAATGGCATGTCCAGCT
TTTTGAAGCAGACCATGACGCGGCAAAATTCTCTCAAGACCAGGGCTTTG
AATACCTCGACATGAAGTACGTCTTGCAAGGGAACAGGGACGCGGGCCCG
CTGACCCTGGCCGTGCAGACACAAACCAAGCGGCATCTCCTCTTCTGCCA
GCCGCCGAGTGTTGATCGCCGCATGCCTAATCATTGTGGAAATTTGGGGG
CCGATGCCGCGTTCACGATTGATGATGTTCCGATGGGTTTGGAGATGGAC
ACCAATTTCTACCTTCAGCACACCATCAAGTCGCCTACTTGCTGGTCGAC
ACAGGGGATGGTCGAGGCGGGGTCACACGTTATCAAGATAATGCCCACTA
ATCCCAAGGGCAAGTATGTTGTGTTATCGGCACTCATTTGGTATTAGTAA
GAAGGGAAGGAGGGATGGGGAGAGTTGTGTGAGTGCACGCAAGCATACGA
GCGAGCCTCGTATCTAGTCAACAAAATGTAGTGAAAAGAATCATATGTAC
AATGCGTACTTAGTTGGAATGTGACGGCATGGTTTCTACTTCTCAAATCC
TTTCCGCACGCTAGGGGGGGAAGGAGGTCAAGCTTTTGAATTTCAAGACT
CAAAAGTCAACGGCTTACCTGGCTGGCCCTTTGTTCTCTCGCTGCCCAAC
GAGGGGTCTAGATTGTGTCTTGCATGCGTGCAAGCCACAGATCAGCTACC
GTGCATCCGCTTTATAATTTTTCTGTCCATATCACAGACAAGGACACATC
AGACCTGCTCTTCCGGCTTTAAAAGAGCATGGCACGCAACCCACCTATCA
TGAACTAATTCGCGGACCGTTAGATCACTCACCTCTTCGTCTGAGAAACA
TCGAGGACAAGACACGCGAGCACCCTACGGAAGACAGAGGTACGTGAGTG
GGGATAAGTATAACGTGCAAAGCGACGTAGATGCAATACGGCCTAGGCTT
GCGGAGTATGAGTCAATGGAGTAGGCTGCGGGCTTGCGCTTGCGGCGGGG
TATTGTGGCGTCCTGGCATGCTCATGCGTCTCCGGGAAAGTGCGTGCCAC
GGCTCAATTCCATGCATACTTGTATCTAGATCGGGGTCTTTTCGATTTAC
TGCACGCCTACCGTCGTTTACGAACAGGCTGTATGGGTGCCTGAGCGTAT
GGGCTATGTTGTCCGTTCACACGAAAGATGACACAAACATGCTAATTCCC
CTTCTCCTTCTCCACTCCCCTCCCTAGGCCTCACCGTAGGCGACGATCCT
TTCTCAATTATCCGCCTCAACGCTAAGCAGCGAAGTTTGTAGGGTGGTCG
GCGTTTGGGAACTTGAGCGGCCCGACGAGCGGCGGCGTTTTTGAAAGGCT
CAAATTACTATGAAAACCATGCAGCTCGAGCAACGACGGGTTCGGCCTCA
AAACAGATTCGATGACATGTACCGGGATACGGAGGCGCGTCAAAACCATT
TTGCTGGCTTAGCTAAACGTTTCCGCAGCGCCGAGGGCAATATCCAGGCG
GTTTTGCATGGAGCAGGGCGTTCGTGCTCGGCCTCCCCTACGCGGAAGGG
CAAGAGCAACACCTGCAGCAGCGAGAAGCGGGCCCGTGCAAGTCAATACG
ATGAGACAGAGGATCGTACCTTCATACCACATTTGTATGCGCACAAGTAC
GGCTCCGAATCAGAGGAGCAGCTGCCTATCAATGAGCGCTTGTCGCGGTA
CCAAGCCGCTCGAAAGCTTCGACTGGAGATGCTACGAGCGCAGCGGGAGA
GCGAGGAGACCCGTGGAATGGGTTCCATCCCCCAACTGATATCGAACAGT
CAGGCACGTGATCGTGCTCTCCGGGCACGCAGCGCCTCGCCCCTCCCTTG
TTCGAGAGGGGGACGAACGGCCAGCAACGTGTTTGAGCGGCTGTCACGGG
ATGGGACGGCGCGTGTCGCCCGGCAAAAGGCTGCCAAGTACCAAGATCCT
GAATGCACGCTCACCTCAGGCTTGTCTACGCGGAGTACACGCTCTGCATC
TCCTCTGCCGTGGTTGCGGTCGGCATCGCCCAAGAAGAAACCGCTTATTG
CCGTGCGTTTTCAAGAGCACGAAAACGTGCAAAGAGCACGACGGAAGCGG
CTGGTGAAGCGGATCGAGGATGAACGCGCGGCACAATACACCTTCATGCC
TAAGGTCCTTGAAAGCAAGCGCAGCTACCACGATGGCAGTGGCAGCAGTA
TGGCAAAGACCACCCAGCGCTCCTCCTCTTCGCAACACCAACGCCAACAC
CATTCCCCCTCATGCAAGACGACAGGCGAGGTTGAGTTTGATCGCTGCAC
TTTCAAGCCCCGCATTGTTTCACGCAAGTCAGAATGTGTCCCGAAAGGTA
GCGTCGTAGAGCGGCTCTTGTTCGAGGGGCAAGAGGCGAAGGAGAAGCTA
GAGCGCCTGCGTCGCATTCGAGAAGAGCAAGAAATGCGCCCATGCACTTT
CAAGCCTACTATCCCTCGATATGAGTCTCCTCATCGACGTTCCTCGCCTT
CCACCCCAAGAGTGATGGTGGTGAGATCACCGGTATCTCGCACACACCCC
TGCCAGCATGTGCATCATCACCATCATTCCTCGCCTACTATATCGGCAGG
TCCCATCCGCGGCAACCACAGTTCAGTTGTCCCCTCCTCCCCACCTCGCT
ACCACCATCAGCAGCAACATCACCACCGCCACCAGCCGCAAAGCGAGGA

Coding sequence (CDS) from alignment at scaffold_5:900406..905554+

>mRNA_2674 ID=mRNA_2674|Name=jgi.p|Nanoce1779_2|581143|organism=Nannochloropsis oceanica|type=CDS|length=5358bp|location=Sequence derived from alignment at scaffold_5:900406..905554+ (Nannochloropsis oceanica)
ATGCCGCCATGGGGAGCAGGGGCGGCGGCGGGAGCTGGTGATGTAGACGA
CGATGACCATCATCATTTGATAGAGCGAAGCGAGGAAGGCCGGATGAGGC
GGGAGCACCTGAGCAATCACGACCGGGAGACAGAAGCTTTATGGCAGCAG
CAGGCGAAGCGCTTCGGCAAGGGCAGCTCTATGCGCCGGGTCATTACAGC
CCTGATGACGGGGACTTTGCTGCTGTTGTTGATTAGCCTGATGCATAGAA
ATTTGGACAAAAGCGACCTAAGCGGGGACACCGACGGCCGTGGCGTGGCC
TTCACGAAAGAGCAACTGGACGCGGAGGCGGCCACGACGGCAGCAGCACT
GGCAGGAGCGGCTGCCGAAGAAAAGGAACTCAAGAAGCAGTTGGACGCCG
AGACGCCCAAGCGACACAGAGTGAAAGATGAAGCGTTTGCAGTCAAGGAG
GACTTGCAGATCTTCAAGAAGGCAGCGGCAGATGCGGAGGCTGCTGCAGT
TGCTGTGGTAGAAAAGATGGCGGATAAGGAGGAAGTAGCGTCTGTAGCAT
CTGCTGTGGCGGCTGCGAAAACGAAGGAAGGCGCAAAACAGAATAGGTAT
GCAAATACAACGACAATGACTGTTGCAGTAAGTGAGAAAGAGGGGGGGAA
GCCAAAGGTTGAAATTGACGAGGCAGCGGCAGCAGCAGTAGCTAAAAATA
AGATGAAGGTGAAAGCATCGACAACGGTAGCGGCAGCAGATCAGAATGAA
GTGAAATCACGGAATACGGAGAAGGACGAAGAAGCTATAATAGCGGCAGC
TATATCGGCGGCGAAAAAGCATCAAAAGAAGGAAGAGGAGGATAAGAACG
GCTCGGCGGCAGCAGCGCTGATAGAAAAGGATGACGTAGATGTGGAGGAG
AAAGTCGCCACAATAAAGCCAGAGTCCGCCAAGAAATCTGCTAAGGCCAA
AGCACCCGTGGAGTCCAGCAGCTCCCTCAAATCGATCACCACCACTGCCA
TCGGCAGCAGTAGCAGCAGCAATGATGACAACGACACTACCAATACCCCT
AACGTCCCTGCCGTTAACCTTTCTACTCTGGATGCCGCCGAGGAACAAAC
CAAGCTAATGGCCGCCAGGACCCTCGTCGCCTCCGCCCTCCTCGCCCTCC
AAGAAGACCATACGCCGGAGCATGCCCAATCACTTTTCGATTCCCTTCAC
TTCCACAACCGAACCTATGTCAAACACAAGCTCATTCGCGCCCTGCTCGG
CCAAAACGGCAGTCCCCATAAAGCCGAAAGCGAACACGACTTTATCATGT
CCTTTGCCGGTACATCCGTCACGGCCGGCCACGACAACTTCTTCCAGCAA
TCCTACCCCATCGTCTTGCGAAAAATCTTACGTAAATCCTACGCTGCCGC
GGGCCTTAAATTAGAAGTTCGAAACCACGCCATGGGGAACAACCCTTCTA
TTCCCGCAGCCTTTTGTGTGAAGAGTCAATTAGGCGAAGATACAGACGTG
GCTGCCTGGGAGTTCGGGATGATGGTAGAGGGGCACTTACAGAATGCGTT
TGTTGAGGAATGGATGCGCAATGCCCTCTACCTACCCAAACGCCCCGCTC
TTTTGATGGTGGACCAGGGAGAGGGAACTAGAAAACCGAGTGCAGATGGA
GTACCGCCAACCGTCCCGAGGGCAGGGTTTCCATCCGTGTGGGGGTTTGG
AGGGCAGAAAGGGAGCCTATTTGAGTATTATTCAGAGTATGGTGTGCATG
CTCAAGCAATGTATGAGGCGCTTTGGACGCTCGATCACCTACCACAGTAT
AATTTCAAGGCCTTGGTCCAGGACGACAAGCCAACACCGAGACCCGCTGA
CTGGCACCCGGGGCCGGGGGAGCACTTGCTTCGCGCGCAGATTCTGGGCC
ACCATTACTTAACGCTGTTGGACGATGCAATGGTCGACGTGCAGGCTGCG
CTCGAAGCAGACAGCGCGGCTGGGGTGGACATTGGGACAGCAGCCACTTC
CCAGGTACGGGCACTGCTGGCATCCACCAAACCCGCCGCTGGTGCTGCAG
CTGCCACTGGTACTGCCGTCACCGCTGATTGGACTAGTGGGGACAAAATA
AAGGACATCCCTCCTCCTTTGTACTGCGATCCTCTTTTCTGCGGGTCTCC
TGCGTCGTGCGCCATGACCTTCGAGCCCAAACAACAATCCTCCCTGCTCG
ACCTGGTCTTGTCGCCCAAAGACCTAAGGGAGGCCTCGCCGGCTATTGAT
CCTCAAGATAGTAAAAAATGGCATGTCCAGCTTTTTGAAGCAGACCATGA
CGCGGCAAAATTCTCTCAAGACCAGGGCTTTGAATACCTCGACATGAAGT
ACGTCTTGCAAGGGAACAGGGACGCGGGCCCGCTGACCCTGGCCGTGCAG
ACACAAACCAAGCGGCATCTCCTCTTCTGCCAGCCGCCGAGTGTTGATCG
CCGCATGCCTAATCATTGTGGAAATTTGGGGGCCGATGCCGCGTTCACGA
TTGATGATGTTCCGATGGGTTTGGAGATGGACACCAATTTCTACCTTCAG
CACACCATCAAGTCGCCTACTTGCTGGTCGACACAGGGGATGGTCGAGGC
GGGGTCACACGTTATCAAGATAATGCCCACTAATCCCAAGGGCAAGTATG
TTGTGTTATCGGCACTCATTTGGTATTAGATGCCGCCATGGGGAGCAGGG
GCGGCGGCGGGAGCTGGTGATGTAGACGACGATGACCATCATCATTTGAT
AGAGCGAAGCGAGGAAGGCCGGATGAGGCGGGAGCACCTGAGCAATCACG
ACCGGGAGACAGAAGCTTTATGGCAGCAGCAGGCGAAGCGCTTCGGCAAG
GGCAGCTCTATGCGCCGGGTCATTACAGCCCTGATGACGGGGACTTTGCT
GCTGTTGTTGATTAGCCTGATGCATAGAAATTTGGACAAAAGCGACCTAA
GCGGGGACACCGACGGCCGTGGCGTGGCCTTCACGAAAGAGCAACTGGAC
GCGGAGGCGGCCACGACGGCAGCAGCACTGGCAGGAGCGGCTGCCGAAGA
AAAGGAACTCAAGAAGCAGTTGGACGCCGAGACGCCCAAGCGACACAGAG
TGAAAGATGAAGCGTTTGCAGTCAAGGAGGACTTGCAGATCTTCAAGAAG
GCAGCGGCAGATGCGGAGGCTGCTGCAGTTGCTGTGGTAGAAAAGATGGC
GGATAAGGAGGAAGTAGCGTCTGTAGCATCTGCTGTGGCGGCTGCGAAAA
CGAAGGAAGGCGCAAAACAGAATAGGTATGCAAATACAACGACAATGACT
GTTGCAGTAAGTGAGAAAGAGGGGGGGAAGCCAAAGGTTGAAATTGACGA
GGCAGCGGCAGCAGCAGTAGCTAAAAATAAGATGAAGGTGAAAGCATCGA
CAACGGTAGCGGCAGCAGATCAGAATGAAGTGAAATCACGGAATACGGAG
AAGGACGAAGAAGCTATAATAGCGGCAGCTATATCGGCGGCGAAAAAGCA
TCAAAAGAAGGAAGAGGAGGATAAGAACGGCTCGGCGGCAGCAGCGCTGA
TAGAAAAGGATGACGTAGATGTGGAGGAGAAAGTCGCCACAATAAAGCCA
GAGTCCGCCAAGAAATCTGCTAAGGCCAAAGCACCCGTGGAGTCCAGCAG
CTCCCTCAAATCGATCACCACCACTGCCATCGGCAGCAGTAGCAGCAGCA
ATGATGACAACGACACTACCAATACCCCTAACGTCCCTGCCGTTAACCTT
TCTACTCTGGATGCCGCCGAGGAACAAACCAAGCTAATGGCCGCCAGGAC
CCTCGTCGCCTCCGCCCTCCTCGCCCTCCAAGAAGACCATACGCCGGAGC
ATGCCCAATCACTTTTCGATTCCCTTCACTTCCACAACCGAACCTATGTC
AAACACAAGCTCATTCGCGCCCTGCTCGGCCAAAACGGCAGTCCCCATAA
AGCCGAAAGCGAACACGACTTTATCATGTCCTTTGCCGGTACATCCGTCA
CGGCCGGCCACGACAACTTCTTCCAGCAATCCTACCCCATCGTCTTGCGA
AAAATCTTACGTAAATCCTACGCTGCCGCGGGCCTTAAATTAGAAGTTCG
AAACCACGCCATGGGGAACAACCCTTCTATTCCCGCAGCCTTTTGTGTGA
AGAGTCAATTAGGCGAAGATACAGACGTGGCTGCCTGGGAGTTCGGGATG
ATGGTAGAGGGGCACTTACAGAATGCGTTTGTTGAGGAATGGATGCGCAA
TGCCCTCTACCTACCCAAACGCCCCGCTCTTTTGATGGTGGACCAGGGAG
AGGGAACTAGAAAACCGAGTGCAGATGGAGTACCGCCAACCGTCCCGAGG
GCAGGGTTTCCATCCGTGTGGGGGTTTGGAGGGCAGAAAGGGAGCCTATT
TGAGTATTATTCAGAGTATGGTGTGCATGCTCAAGCAATGTATGAGGCGC
TTTGGACGCTCGATCACCTACCACAGTATAATTTCAAGGCCTTGGTCCAG
GACGACAAGCCAACACCGAGACCCGCTGACTGGCACCCGGGGCCGGGGGA
GCACTTGCTTCGCGCGCAGATTCTGGGCCACCATTACTTAACGCTGTTGG
ACGATGCAATGGTCGACGTGCAGGCTGCGCTCGAAGCAGACAGCGCGGCT
GGGGTGGACATTGGGACAGCAGCCACTTCCCAGGTACGGGCACTGCTGGC
ATCCACCAAACCCGCCGCTGGTGCTGCAGCTGCCACTGGTACTGCCGTCA
CCGCTGATTGGACTAGTGGGGACAAAATAAAGGACATCCCTCCTCCTTTG
TACTGCGATCCTCTTTTCTGCGGGTCTCCTGCGTCGTGCGCCATGACCTT
CGAGCCCAAACAACAATCCTCCCTGCTCGACCTGGTCTTGTCGCCCAAAG
ACCTAAGGGAGGCCTCGCCGGCTATTGATCCTCAAGATAGTAAAAAATGG
CATGTCCAGCTTTTTGAAGCAGACCATGACGCGGCAAAATTCTCTCAAGA
CCAGGGCTTTGAATACCTCGACATGAAGTACGTCTTGCAAGGGAACAGGG
ACGCGGGCCCGCTGACCCTGGCCGTGCAGACACAAACCAAGCGGCATCTC
CTCTTCTGCCAGCCGCCGAGTGTTGATCGCCGCATGCCTAATCATTGTGG
AAATTTGGGGGCCGATGCCGCGTTCACGATTGATGATGTTCCGATGGGTT
TGGAGATGGACACCAATTTCTACCTTCAGCACACCATCAAGTCGCCTACT
TGCTGGTCGACACAGGGGATGGTCGAGGCGGGGTCACACGTTATCAAGAT
AATGCCCACTAATCCCAAGGGCAAGTATGTTGTGTTATCGGCACTCATTT
GGTATTAG

Synonyms

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