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Properties
| Property Name | Value |
|---|
| TranscriptId | 576847 |
| Track | FilteredModels2 |
| ProteinId | 576761 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:665827..667384 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_267 ID=mRNA_267|Name=jgi.p|Nanoce1779_2|576761|organism=Nannochloropsis oceanica|type=mRNA|length=1558bp
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCGTGGTTTCG
GCTTCTTGTCGCTCTTGGCCTCATGCAGCAGTGTCCAAAATTCAGGGGTT
CGGAAGGGCAGCAGCCTGTGATGATAGTCATGACGAGGAAAGCGATGGGA
GTGAGGGAGCGGACCGCCGTTTGGTTGCGAAGGTGGGGTCAAAACGAATA
ATCAGGTCAGACAAGTATAACAGACTATCAGATAGCTGGTGGATTGGAAA
TAGGTTTGCTCTTCATCTACAAACCTATTTAATCTCTCCTCCCCACCCAT
CCCCTCTTTCCTAATTTACTTTCCTGATTTAACCCAAAACAGGAGAGTCG
ACTTCAAATGCTCCTCGCTCATCACCGAGACCTTAGAAGACGCCGAGACT
CTGTTTGGACTATCCAACCGAGCCGTCGCAGTCGAATCCTGCCTTTTTGT
TCTTGAAATTCTCAAAACTATCCAGCCCCAAGTCCTCCTCATCTTGCCCG
ACAAGAATCGCGCTTTGGGAGGTAACCGCGGTACATTAGAAACATACCTC
GAGACAGCCACTGAGGCCATTTCTCAGCTTCGTATTTTGACTTATCGATG
CGCCGCTCCACGTTTGATCGGAGCTGCTGGATTGGTCCATGCGATAGAAG
AGCAGCAGTGGAATCAGCATCTGATCCGGGACGAGGCAAATCCCTACACA
GATAAGGTTTTTGGGACTTGCCGTGACTTATGGGAGAAGATTAAGGGACC
GGATGGAGGGGTGGTGATAGGGATGGGGGTAGGCGTGTACATCCCCCCCT
CGGCGCAGCTGCTGATATGGACGGAGGTGGCTCAAAGCGTTATGGGCGCG
CTGTTGGAGGCTTTCGCAAGGATTGAACGGTGCTCTACGGAAGGGCGGTC
GTTGATGAGTATGGACTTGCAAGCGGTGCAGGCAGGATTGGATCGTATTC
ATAAAGTGAGGCCGATTCGCGGGAAAATGCATGTGGATAATTATGTGAAG
GCTTTTTATTATGGAGAGGCAGATGTAATGGCGTGGATCGAACAGAACTA
CCAGAACTATGCCTTCCGGCATATGGCCGGGCTGTTGAATGTGGGGGTAG
GACAAAAGAAGAAGAAGGGGATGCGCGAACTTGTCAATAAGGTGGCTGCT
TTATACGCCTCGGAGGAGGACTTTGAGGAAGATGAGGGGGGATGGAAGCA
GGAAGAGGAGCGGGGAAGTGTGCATGGTGCGGAAAAGGAGGGTGGTCACA
ATTGGGATGCCACGGGGGCCAGTACTTTGTATGGGCAATACCACCACAGG
AGCACCGACAGCAGTAGCATGAATCCTTCCCTTGTGACGCCTGCTTCCTC
GTCGTTGTTCTCTTCTTCCTCCGATGCTAAAGCGAGTATGAGCAGCACCT
TTAGCAATATGATGCAGAGAAAGGGATTGCGGAAGGGATTTCTGTAGATA
ACATTATGCACAGAGCAAAGTGCGTGTGTCGCTAGGCCGGATAAGGCTAA
AATAGCATCTTTACACGCGGGAAAGCAATCGCTTGAAGTTATGTCCTCGC
ACTGAAGC back to topprotein sequence of jgi.p|Nanoce1779_2|576761 >mRNA_267-protein ID=mRNA_267-protein|Name=jgi.p|Nanoce1779_2|576761|organism=Nannochloropsis oceanica|type=polypeptide|length=225bp
MGVGVYIPPSAQLLIWTEVAQSVMGALLEAFARIERCSTEGRSLMSMDLQ
AVQAGLDRIHKVRPIRGKMHVDNYVKAFYYGEADVMAWIEQNYQNYAFRH
MAGLLNVGVGQKKKKGMRELVNKVAALYASEEDFEEDEGGWKQEEERGSV
HGAEKEGGHNWDATGASTLYGQYHHRSTDSSSMNPSLVTPASSSLFSSSS
DAKASMSSTFSNMMQRKGLRKGFL* back to topmRNA from alignment at scaffold_3:665827..667384- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_267 ID=mRNA_267|Name=jgi.p|Nanoce1779_2|576761|organism=Nannochloropsis oceanica|type=mRNA|length=1558bp|location=Sequence derived from alignment at scaffold_3:665827..667384- (Nannochloropsis oceanica)
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCGTGGTTTCG
GCTTCTTGTCGCTCTTGGCCTCATGCAGCAGTGTCCAAAATTCAGGGGTT
CGGAAGGGCAGCAGCCTGTGATGATAGTCATGACGAGGAAAGCGATGGGA
GTGAGGGAGCGGACCGCCGTTTGGTTGCGAAGGTGGGGTCAAAACGAATA
ATCAGGTCAGACAAGTATAACAGACTATCAGATAGCTGGTGGATTGGAAA
TAGGTTTGCTCTTCATCTACAAACCTATTTAATCTCTCCTCCCCACCCAT
CCCCTCTTTCCTAATTTACTTTCCTGATTTAACCCAAAACAGGAGAGTCG
ACTTCAAATGCTCCTCGCTCATCACCGAGACCTTAGAAGACGCCGAGACT
CTGTTTGGACTATCCAACCGAGCCGTCGCAGTCGAATCCTGCCTTTTTGT
TCTTGAAATTCTCAAAACTATCCAGCCCCAAGTCCTCCTCATCTTGCCCG
ACAAGAATCGCGCTTTGGGAGGTAACCGCGGTACATTAGAAACATACCTC
GAGACAGCCACTGAGGCCATTTCTCAGCTTCGTATTTTGACTTATCGATG
CGCCGCTCCACGTTTGATCGGAGCTGCTGGATTGGTCCATGCGATAGAAG
AGCAGCAGTGGAATCAGCATCTGATCCGGGACGAGGCAAATCCCTACACA
GATAAGGTTTTTGGGACTTGCCGTGACTTATGGGAGAAGATTAAGGGACC
GGATGGAGGGGTGGTGATAGGGATGGGGGTAGGCGTGTACATCCCCCCCT
CGGCGCAGCTGCTGATATGGACGGAGGTGGCTCAAAGCGTTATGGGCGCG
CTGTTGGAGGCTTTCGCAAGGATTGAACGGTGCTCTACGGAAGGGCGGTC
GTTGATGAGTATGGACTTGCAAGCGGTGCAGGCAGGATTGGATCGTATTC
ATAAAGTGAGGCCGATTCGCGGGAAAATGCATGTGGATAATTATGTGAAG
GCTTTTTATTATGGAGAGGCAGATGTAATGGCGTGGATCGAACAGAACTA
CCAGAACTATGCCTTCCGGCATATGGCCGGGCTGTTGAATGTGGGGGTAG
GACAAAAGAAGAAGAAGGGGATGCGCGAACTTGTCAATAAGGTGGCTGCT
TTATACGCCTCGGAGGAGGACTTTGAGGAAGATGAGGGGGGATGGAAGCA
GGAAGAGGAGCGGGGAAGTGTGCATGGTGCGGAAAAGGAGGGTGGTCACA
ATTGGGATGCCACGGGGGCCAGTACTTTGTATGGGCAATACCACCACAGG
AGCACCGACAGCAGTAGCATGAATCCTTCCCTTGTGACGCCTGCTTCCTC
GTCGTTGTTCTCTTCTTCCTCCGATGCTAAAGCGAGTATGAGCAGCACCT
TTAGCAATATGATGCAGAGAAAGGGATTGCGGAAGGGATTTCTGTAGATA
ACATTATGCACAGAGCAAAGTGCGTGTGTCGCTAGGCCGGATAAGGCTAA
AATAGCATCTTTACACGCGGGAAAGCAATCGCTTGAAGTTATGTCCTCGC
ACTGAAGC back to topCoding sequence (CDS) from alignment at scaffold_3:665827..667384- >mRNA_267 ID=mRNA_267|Name=jgi.p|Nanoce1779_2|576761|organism=Nannochloropsis oceanica|type=CDS|length=675bp|location=Sequence derived from alignment at scaffold_3:665827..667384- (Nannochloropsis oceanica)
ATGGGGGTAGGCGTGTACATCCCCCCCTCGGCGCAGCTGCTGATATGGAC
GGAGGTGGCTCAAAGCGTTATGGGCGCGCTGTTGGAGGCTTTCGCAAGGA
TTGAACGGTGCTCTACGGAAGGGCGGTCGTTGATGAGTATGGACTTGCAA
GCGGTGCAGGCAGGATTGGATCGTATTCATAAAGTGAGGCCGATTCGCGG
GAAAATGCATGTGGATAATTATGTGAAGGCTTTTTATTATGGAGAGGCAG
ATGTAATGGCGTGGATCGAACAGAACTACCAGAACTATGCCTTCCGGCAT
ATGGCCGGGCTGTTGAATGTGGGGGTAGGACAAAAGAAGAAGAAGGGGAT
GCGCGAACTTGTCAATAAGGTGGCTGCTTTATACGCCTCGGAGGAGGACT
TTGAGGAAGATGAGGGGGGATGGAAGCAGGAAGAGGAGCGGGGAAGTGTG
CATGGTGCGGAAAAGGAGGGTGGTCACAATTGGGATGCCACGGGGGCCAG
TACTTTGTATGGGCAATACCACCACAGGAGCACCGACAGCAGTAGCATGA
ATCCTTCCCTTGTGACGCCTGCTTCCTCGTCGTTGTTCTCTTCTTCCTCC
GATGCTAAAGCGAGTATGAGCAGCACCTTTAGCAATATGATGCAGAGAAA
GGGATTGCGGAAGGGATTTCTGTAG back to top
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