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Properties
| Property Name | Value |
|---|
| TranscriptId | 581215 |
| Track | FilteredModels2 |
| ProteinId | 581129 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:892645..894972 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2669 ID=mRNA_2669|Name=jgi.p|Nanoce1779_2|581129|organism=Nannochloropsis oceanica|type=mRNA|length=1190bp
AAACAAAAACCCTTCCCCCGACCACAAACCACAGCCATGCCATCAATTCC
ACAACCTGGCCTCTTCCTTCTCGTGCTCTTGGGGACCAGTCTCGTCGTCC
AGGGTTTTCTGCCGCCCACAAGTGTGCCAACAAGAGAGGTAAGCAGTTAG
GCGGGGTTGGACCTCAGAGTGCAACCCTTTCACCTGTCCATCAGAATGGG
GGGTGCGCTGCACGACATGCATTCTACTTTGCCTCTGTAAGAGTCAGAAC
TAGCCCCAAAAGGTGTGTTCAATACTATACAGACCATGACCCCGTCCTCA
CTCCCCTTTCTCCCCCCCTAACACCACACAATATCAATTCTCAGACCACC
AAGCTCACCGCCCTGCGTGCCACCCCGGCGTCGACACCTGAACATGATGA
CCGCCGTTCCTGGTTTCAACAGGTGGCGGTGTCAATGTTAGCCCTGTCCG
CCACCAACACATTTCTTCGTCCGTCTTCTGCCAGTGCGACCCGCTTTGAC
CAAGAAACGGTGCTCGACCCTATCTATCCCAACGTCACGGAGCCCGCCTT
CACGTCTACCTGTTTCCTGGAATTTGCCTCGGAGAACACCAAGTTTGGGA
GAGTAGAGGTGTCACTTTATGGGAAAGTATGTCCCAAAACAGCAGCTAAT
TTTGAGGCCTTGTGTCGGGAGGGGTACAAGGGGAGCAATGTCTATCGGGT
GCTCAAAGATTTCTCAATTCAAATGGGCGATATTGGAAGTAAGAAACGAG
GGGTCATGGGTCGGTCTAGTTTTGAGGGAGGGGCGCCTTTCGCGAAAGAA
ACGATGCAGGTGCAGCATTCATTGGAAGGGATGCTCTCAATGGTGAATGA
CAGAGAAGGTAAAGTGGACTCGAGATTTTTCATCAACCTTGGGAAGGACG
GTTCGTGGGCGGACGGACGGTATGTGGCGTTTGGAAGGGTGACGAGGGGT
TTGGAAGTCTTGAAGGAGCTGGAAAAGGTGGAGGTGAAGCCACCCAGTAA
CGTCCCGGCGACTCCGATAAAGATTGTGGAGGCCGGCGTGCTGGAGACCC
GGACGAGGTAGATTAGAAATTCAAGGAGGTAAGATCGACACTTAATTCGT
CGTCAACTAGTCAGGAATCGGCGACGAAAAAGAGTAAAATGAAAGGAAGA
GACCCAAGCAGCCAGAATTCAAGACAATGAAGAGGATCTT back to topprotein sequence of jgi.p|Nanoce1779_2|581129 >mRNA_2669-protein ID=mRNA_2669-protein|Name=jgi.p|Nanoce1779_2|581129|organism=Nannochloropsis oceanica|type=polypeptide|length=209bp
MLALSATNTFLRPSSASATRFDQETVLDPIYPNVTEPAFTSTCFLEFASE
NTKFGRVEVSLYGKVCPKTAANFEALCREGYKGSNVYRVLKDFSIQMGDI
GSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFI
NLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEA
GVLETRTR* back to topmRNA from alignment at scaffold_5:892645..894972- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2669 ID=mRNA_2669|Name=jgi.p|Nanoce1779_2|581129|organism=Nannochloropsis oceanica|type=mRNA|length=2328bp|location=Sequence derived from alignment at scaffold_5:892645..894972- (Nannochloropsis oceanica)
AAACAAAAACCCTTCCCCTGTAAATTGAATATTACCGCCCAACGTCGCTG
GCTCCACCACCGTCACTAGCAGCTCTAGATTATACCCGTCGTCCCACGAA
GCCCTGTCGTAATCCTCGATATTTATTTTAGAATCCTTGAGAAAGCCTTT
GCTCTGCATGTAGGCCAAAATTTGCTTCATTCCTTCTATAGTTCCGTCCA
ATCCATCTTTTTGAGCGTCGTTGCTCTTGATACCTGGTGATCCCTTTATG
ACTCCATTCAAAACTGCTTCGCCTAGGTCTCGGACAAAAACCGCTCGGGC
CCGGAGATCAGGAATAAGCTTGGCGGCCACGCGGAAATCGGCGTAAGAAT
AGCAATCGAAGCACCGTTCATTCGTTAAGTCGTCTGAGGGGAAAGGTGCC
CGTCGTTGGAAACCCGGTTCGACAGTCTGTCGGAATGCACTCACTTCCTT
GTTCACCTTCTCTAAAGATTGCCCCGAGATCTTGCTTATCAATCCGAGGG
TAGTCATGTCCAGAAAGGTGGCAAAGTCTTTGTCTAGCACTCGGGCAGGG
CGGATAGGGAGGGGGGACTGCTCCGCTCCACCAGTGAGAGGATTTCCTTT
CAACAAATCGACGAGATATGCCTCGGCATCGAGCTCGGCCGCACCCTTGA
TGCGAGCAGCGTATGCGGCGGAAGGGGAAAAAAGGAATAGGGCCGCCATC
GCGGATGCAGCGAGGGACGTGGTGCCCAGGTGGCTGCGTCGTTGGAAAAG
ACCTCGAGTCGGAGCAGCTCGCGGATGCGGCATGTTGGCGGAATCACTGT
AGCCACTAAAACTTGACATAATGGTGATCCTCTTAAGAGTAGGTGGGGTC
CGTGAGCGTAGTGGGGTAGCGGAATCCTCCCACTTGCTGACCGTCATCGA
GCTCCGATGACGTAGCAGTGTGAAAGCCTGGGTTGGAACTAGGGTAGAGG
AAAACAGAGTACTAGTGACCGCAACCGCAAGCAAAAGGAGTCGATGCCAT
CGACATGATGAAGGTGCCATGCTGTGCGTTTATGCGAGTGTATAGGCGTT
ACGTAAGCCGACTTAGGCATGGTCATTGCCGCAGCCAGAGTAGGTCGATG
ACAATCAGCGAGCTCCGTAACAGTCGCCTCAACCACGCCTTGTTCATCTC
CAAACCCGACCACAAACCACAGCCATGCCATCAATTCCACAACCTGGCCT
CTTCCTTCTCGTGCTCTTGGGGACCAGTCTCGTCGTCCAGGGTTTTCTGC
CGCCCACAAGTGTGCCAACAAGAGAGGTAAGCAGTTAGGCGGGGTTGGAC
CTCAGAGTGCAACCCTTTCACCTGTCCATCAGAATGGGGGGTGCGCTGCA
CGACATGCATTCTACTTTGCCTCTGTAAGAGTCAGAACTAGCCCCAAAAG
GTGTGTTCAATACTATACAGACCATGACCCCGTCCTCACTCCCCTTTCTC
CCCCCCTAACACCACACAATATCAATTCTCAGACCACCAAGCTCACCGCC
CTGCGTGCCACCCCGGCGTCGACACCTGAACATGATGACCGCCGTTCCTG
GTTTCAACAGGTGGCGGTGTCAATGTTAGCCCTGTCCGCCACCAACACAT
TTCTTCGTCCGTCTTCTGCCAGTGCGACCCGCTTTGACCAAGAAACGGTG
CTCGACCCTATCTATCCCAACGTCACGGAGCCCGCCTTCACGTCTACCTG
TTTCCTGGAATTTGCCTCGGAGAACACCAAGTTTGGGAGAGTAGAGGTGT
CACTTTATGGGAAAGTATGTCCCAAAACAGCAGCTAATTTTGAGGCCTTG
TGTCGGGAGGGGTACAAGGGGAGCAATGTCTATCGGGTGCTCAAAGATTT
CTCAATTCAAATGGGCGATATTGGAAGTAAGAAACGAGGGGTCATGGGTC
GGTCTAGTTTTGAGGGAGGGGCGCCTTTCGCGAAAGAAACGATGCAGGTG
CAGCATTCATTGGAAGGGATGCTCTCAATGGTGAATGACAGAGAAGGTAA
AGTGGACTCGAGATTTTTCATCAACCTTGGGAAGGACGGTTCGTGGGCGG
ACGGACGGTATGTGGCGTTTGGAAGGGTGACGAGGGGTTTGGAAGTCTTG
AAGGAGCTGGAAAAGGTGGAGGTGAAGCCACCCAGTAACGTCCCGGCGAC
TCCGATAAAGATTGTGGAGGCCGGCGTGCTGGAGACCCGGACGAGGTAGA
TTAGAAATTCAAGGAGGTAAGATCGACACTTAATTCGTCGTCAACTAGTC
AGGAATCGGCGACGAAAAAGAGTAAAATGAAAGGAAGAGACCCAAGCAGC
CAGAATTCAAGACAATGAAGAGGATCTT back to topCoding sequence (CDS) from alignment at scaffold_5:892645..894972- >mRNA_2669 ID=mRNA_2669|Name=jgi.p|Nanoce1779_2|581129|organism=Nannochloropsis oceanica|type=CDS|length=627bp|location=Sequence derived from alignment at scaffold_5:892645..894972- (Nannochloropsis oceanica)
ATGTTAGCCCTGTCCGCCACCAACACATTTCTTCGTCCGTCTTCTGCCAG
TGCGACCCGCTTTGACCAAGAAACGGTGCTCGACCCTATCTATCCCAACG
TCACGGAGCCCGCCTTCACGTCTACCTGTTTCCTGGAATTTGCCTCGGAG
AACACCAAGTTTGGGAGAGTAGAGGTGTCACTTTATGGGAAAGTATGTCC
CAAAACAGCAGCTAATTTTGAGGCCTTGTGTCGGGAGGGGTACAAGGGGA
GCAATGTCTATCGGGTGCTCAAAGATTTCTCAATTCAAATGGGCGATATT
GGAAGTAAGAAACGAGGGGTCATGGGTCGGTCTAGTTTTGAGGGAGGGGC
GCCTTTCGCGAAAGAAACGATGCAGGTGCAGCATTCATTGGAAGGGATGC
TCTCAATGGTGAATGACAGAGAAGGTAAAGTGGACTCGAGATTTTTCATC
AACCTTGGGAAGGACGGTTCGTGGGCGGACGGACGGTATGTGGCGTTTGG
AAGGGTGACGAGGGGTTTGGAAGTCTTGAAGGAGCTGGAAAAGGTGGAGG
TGAAGCCACCCAGTAACGTCCCGGCGACTCCGATAAAGATTGTGGAGGCC
GGCGTGCTGGAGACCCGGACGAGGTAG back to top
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