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Properties
| Property Name | Value |
|---|
| TranscriptId | 637639 |
| Track | FilteredModels2 |
| ProteinId | 637553 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:888207..889486 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2668 ID=mRNA_2668|Name=jgi.p|Nanoce1779_2|637553|organism=Nannochloropsis oceanica|type=mRNA|length=804bp
ATGAAGGCGCCTGTGTATGAGGGATTGAAACACGACGATTATTTTGAGGC
TTGTCGTCAGTTGGGCGTCCCTCCTGATATCGACGAGGGGAGACTAGCAG
CAAAAGTGGACGCTTTGCTGGTGAAATATGAAAAGGACCGTAAGAAGAAG
ATTATGATTGATTGGTCCTCGGATAAGATCATGGAGCATCGCGTTTACAT
GCAGTTGGAGGGGAAGGCCTACAAGCCAGTGGGGGAGCCGGTGGACATGA
GGCTGCTTGATGAGAGGTACCTAGACATCTCGCCCAAGGACGCACTGGAT
CTGATGACCTCCCTTGATCTGTCCCCGGCGGACGTCAAGGGACAACCGAA
TGCTCTGGCCAAGGTCGTTAACAGTCCTTTGTTGCGGGCACTGCAGATTA
CGAGGCTGGTGCGCATGGCCCGTTATGTATGGATGGCATTTGGTGAGAGC
TTGGAAGGACCGAACCTGCGAAGGATGCTCTGGCCGGGGAGTGTGGGCTT
GGTGTTGGCATTGTGGTTTGGGAATGCGGTGGATTTTGTGCCCTTGAAGT
ATTTCATCACCATTATGGCGAACACGGGCCCGATCTACAACAGGGGCGAG
GCAAAGCTGGCGAACCGGAAGGAAAGGCGGCCGATCAAGTGGAAGAAGTT
GTTGTTGGCGTTTGCTTTTATGGGCATGTCGACGGGGGGGGCATGGGCGG
GGGGAAAGGCGTGGTGTGCGCTCAAGTATCCTACAGGGGAGCTGTCCGAG
GGATTATTTATCCCCTTGGTGGCCAATATCGTGACCGCCCTGCAGAGTTA
CTGA back to topprotein sequence of jgi.p|Nanoce1779_2|637553 >mRNA_2668-protein ID=mRNA_2668-protein|Name=jgi.p|Nanoce1779_2|637553|organism=Nannochloropsis oceanica|type=polypeptide|length=268bp
MKAPVYEGLKHDDYFEACRQLGVPPDIDEGRLAAKVDALLVKYEKDRKKK
IMIDWSSDKIMEHRVYMQLEGKAYKPVGEPVDMRLLDERYLDISPKDALD
LMTSLDLSPADVKGQPNALAKVVNSPLLRALQITRLVRMARYVWMAFGES
LEGPNLRRMLWPGSVGLVLALWFGNAVDFVPLKYFITIMANTGPIYNRGE
AKLANRKERRPIKWKKLLLAFAFMGMSTGGAWAGGKAWCALKYPTGELSE
GLFIPLVANIVTALQSY* back to topmRNA from alignment at scaffold_5:888207..889486- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2668 ID=mRNA_2668|Name=jgi.p|Nanoce1779_2|637553|organism=Nannochloropsis oceanica|type=mRNA|length=1280bp|location=Sequence derived from alignment at scaffold_5:888207..889486- (Nannochloropsis oceanica)
ATGAAGGCGCCTGTGTATGAGGGATTGAAACACGACGATTATTTTGAGGC
TTGTCGTCAGTTGGGCGTCCCTCCTGATATCGACGAGGGGAGACTAGCAG
CAAAAGTGGACGCTTTGCTGGTGAAATATGAAAAGGACCGTAAGAAGAAG
ATTATGATTGATTGGTCCTCGGATAAGATCATGGAGCATCGCGTTTACAT
GCAGTTGGAGGGGAAGGCCTACAAGCCAGTGGGGGAGCCGGTGGACATGA
GGCTGCTTGATGAGAGGTACCTAGACATCTCGCCCAAGGACGCACTGGAT
CTGATGACCTCCCTTGATCTGTCCCCGGCGGACGTCAAGGGACAACCGAA
TGCTCTGGCCAAGGTCGTTAACAGTCCTTTGTTGCGGGCACTGCAGATTA
CGAGGCTGGTGCGCATGGCCCGTTATGTATGGATGGCATTTGGTGAGAGC
TTGGAAGGACCGAACCTGCGAAGGATGCTCTGGCCGGGGAGTGTGGGCTT
GGTGTTGGCATTGTGGTTTGGGAATGCGGTGGATTTTGTGCCCTTGAAGT
ATTTCATCACCATTATGGCGAACACGGGCCCGATCTACAACAGGGGCGAG
GCAAAGCTGGCGAACCGGAAGGAAAGGCGGCCGATCAAGTGGAAGAAGTT
GTTGTTGGCGTTTGCTTTTATGGGCATGTCGACGGGGGGGGCATGGGCGG
GGGGAAAGGCGTGGTGTGCGCTCAAGTATCCTACAGGGGAGCTGTCCGAG
GGATTATTTATCCCCTTGGTGGCCAATATCGTGACGTATGTGATGAGTTC
TTGCTTCTTCATTCGAGAGAGCACCCTGGCAGGCGGACGGGCGGCAAGAG
ATGCGGAGGGTGGGGAGGGAGGGAAAGGGGGGAAGGGGGGGGGAAGGAGG
CCAGCATAAAATGTTCCGAGAGGATGACGAGAGGGAGGGAGGGAAGGAGG
GAGGGATGAGAGAGGGAGGGCAAGTGAAAGGCGACAAGACGACGAAGATG
CACACACGCAGACAAAGTGGTGGTGTCCAGCTATAAAAGAATGCAGCGAC
CAAGCAGAGACTACACCGAGCACCAACAGAGGAGAGAACAACGGCTTCAG
CCATCACCTTGTCCCGTCTTCTTTTTTCTTCCTCCTCCTACCCATGATTT
TGTGTGGAGTGCGTTTCTCTATCCTCCTTCTCCTTCTCCTCCTTCTCCTC
CTTCTCCTCCTTCTCCCACTCCTATTCATTTCCTTCCTCTTCTTCTCCAT
TCTTGGCACAGCGCCCTGCAGAGTTACTGA back to topCoding sequence (CDS) from alignment at scaffold_5:888207..889486- >mRNA_2668 ID=mRNA_2668|Name=jgi.p|Nanoce1779_2|637553|organism=Nannochloropsis oceanica|type=CDS|length=1608bp|location=Sequence derived from alignment at scaffold_5:888207..889486- (Nannochloropsis oceanica)
CGCCCTGCAGAGTTACTGAATGAAGGCGCCTGTGTATGAGGGATTGAAAC
ACGACGATTATTTTGAGGCTTGTCGTCAGTTGGGCGTCCCTCCTGATATC
GACGAGGGGAGACTAGCAGCAAAAGTGGACGCTTTGCTGGTGAAATATGA
AAAGGACCGTAAGAAGAAGATTATGATTGATTGGTCCTCGGATAAGATCA
TGGAGCATCGCGTTTACATGCAGTTGGAGGGGAAGGCCTACAAGCCAGTG
GGGGAGCCGGTGGACATGAGGCTGCTTGATGAGAGGTACCTAGACATCTC
GCCCAAGGACGCACTGGATCTGATGACCTCCCTTGATCTGTCCCCGGCGG
ACGTCAAGGGACAACCGAATGCTCTGGCCAAGGTCGTTAACAGTCCTTTG
TTGCGGGCACTGCAGATTACGAGGCTGGTGCGCATGGCCCGTTATGTATG
GATGGCATTTGGTGAGAGCTTGGAAGGACCGAACCTGCGAAGGATGCTCT
GGCCGGGGAGTGTGGGCTTGGTGTTGGCATTGTGGTTTGGGAATGCGGTG
GATTTTGTGCCCTTGAAGTATTTCATCACCATTATGGCGAACACGGGCCC
GATCTACAACAGGGGCGAGGCAAAGCTGGCGAACCGGAAGGAAAGGCGGC
CGATCAAGTGGAAGAAGTTGTTGTTGGCGTTTGCTTTTATGGGCATGTCG
ACGGGGGGGGCATGGGCGGGGGGAAAGGCGTGGTGTGCGCTCAAGTATCC
TACAGGGGAGCTGTCCGAGGGATTATTTATCCCCTTGGTGGCCAATATCG
TGACCGCCCTGCAGAGTTACTGAATGAAGGCGCCTGTGTATGAGGGATTG
AAACACGACGATTATTTTGAGGCTTGTCGTCAGTTGGGCGTCCCTCCTGA
TATCGACGAGGGGAGACTAGCAGCAAAAGTGGACGCTTTGCTGGTGAAAT
ATGAAAAGGACCGTAAGAAGAAGATTATGATTGATTGGTCCTCGGATAAG
ATCATGGAGCATCGCGTTTACATGCAGTTGGAGGGGAAGGCCTACAAGCC
AGTGGGGGAGCCGGTGGACATGAGGCTGCTTGATGAGAGGTACCTAGACA
TCTCGCCCAAGGACGCACTGGATCTGATGACCTCCCTTGATCTGTCCCCG
GCGGACGTCAAGGGACAACCGAATGCTCTGGCCAAGGTCGTTAACAGTCC
TTTGTTGCGGGCACTGCAGATTACGAGGCTGGTGCGCATGGCCCGTTATG
TATGGATGGCATTTGGTGAGAGCTTGGAAGGACCGAACCTGCGAAGGATG
CTCTGGCCGGGGAGTGTGGGCTTGGTGTTGGCATTGTGGTTTGGGAATGC
GGTGGATTTTGTGCCCTTGAAGTATTTCATCACCATTATGGCGAACACGG
GCCCGATCTACAACAGGGGCGAGGCAAAGCTGGCGAACCGGAAGGAAAGG
CGGCCGATCAAGTGGAAGAAGTTGTTGTTGGCGTTTGCTTTTATGGGCAT
GTCGACGGGGGGGGCATGGGCGGGGGGAAAGGCGTGGTGTGCGCTCAAGT
ATCCTACAGGGGAGCTGTCCGAGGGATTATTTATCCCCTTGGTGGCCAAT
ATCGTGAC back to top
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