Properties
| Property Name | Value |
|---|
| TranscriptId | 581194 |
| Track | FilteredModels2 |
| ProteinId | 581108 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:876581..877860 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2663 ID=mRNA_2663|Name=jgi.p|Nanoce1779_2|581108|organism=Nannochloropsis oceanica|type=mRNA|length=1050bp
CCTGCCACCAAGCAGCCGAAGCAGAAGGTTGAAATGTTTCGTCTTGACCG
ACTTCTGGCCAACCGAGGGGTAGGCAGTCGGACGGAGGTCACGGTGTTGG
TGCGTCGGGGAAAAGTGGCATTACAGAATGGGGAGGTGATCAAAGACCCC
AAGTTTCACCTTCCCTCCACCGCCCTTCTTTTTGTCAACCAAGAGCCCAT
CCGCCCCCTCCCCCTCCTCGTCGCTTATAACAAGCCTCTGGGCGTGCACT
CCACAATGGGTGATCCTATGGGTCGCCCGAATCTTGAAGATACATTACAT
CCTCGTCTCGCCAAATTGTTTCATCCTGTCGGCAGGCTTGACGCTGACAC
CACGGGCTTGCTTTTATTTTCAATCGATGGACAACTAACCCAGCGACTGT
TACACCCCTCGGGAAACGTGCAGAGAGAATATCTGGCAACTGTCGAGTTG
GGGGATGAGGGGGAGGGAGGGAAGGACAAGTTTGACGAAGCAAAGCTGAG
GGAGACGTTGAAGCAGGGAGTGGAAACAGCGGATGGCACATACCCTGCCG
AATTGTTAGGGGTGTCGGAAGCGATTAAAAAAGAGATAGTTGAAAAAGAG
GAGGAGGATGGGGAGGAAGGAGGGGAGAAGACAAAAGGTCTACTTGTACT
GCGTGTTGGCGTGTCGGAAGGGAAGCATCGGATGGTTCGTCGATTGCTTG
CAAATGCGGGCTACCCTGTCGTAGGCTTGCATCGAGTAAGGTACGGTAGG
GTAGAGTTGGGAGATTTGGCCGAGGGCGAAATCGTGGAGATAGATGATGC
AAGTGACGTTGGACAGTGGGCTAGGCGGATGATGGAAGGGAAACATTAGT
TATGAAATTAATAATTGATGATGGGAAGGGGAGGGACGTAAGAGGGTAAT
CGAGCCAAGCTGGTACATATGAGCCAGACAAAGTACACTACAGATTGCAT
ATGGTGTGATAGAGCTGTTGATTCGTTGTGTAGGACGCTTTGGTCTTGAT
TTCGTGGCCTTTTGCTGGCTTTATGGGCCACAACGTCATGCTCTGGTGGT back to topprotein sequence of jgi.p|Nanoce1779_2|581108 >mRNA_2663-protein ID=mRNA_2663-protein|Name=jgi.p|Nanoce1779_2|581108|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHLPSTALLF
VNQEPIRPLPLLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRLAKLFHPVG
RLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKF
DEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKT
KGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEI
VEIDDASDVGQWARRMMEGKH* back to topmRNA from alignment at scaffold_5:876581..877860+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2663 ID=mRNA_2663|Name=jgi.p|Nanoce1779_2|581108|organism=Nannochloropsis oceanica|type=mRNA|length=1280bp|location=Sequence derived from alignment at scaffold_5:876581..877860+ (Nannochloropsis oceanica)
CCTGCCACCAAGCAGCCGAAGCAGAAGGTTGAAATGTTTCGTCTTGACCG
ACTTCTGGCCAACCGAGGGGTAGGCAGTCGGACGGAGGTCACGGTGTTGG
TGCGTCGGGGAAAAGTGGCATTACAGAATGGGGAGGTGATCAAGTACGTT
GAGGAACGCTGATTGATGTGGAAAGAGTGAGAGGAGAAGCGAATTCGCAT
GCGCAGACGAAGAGACTGTCCTCCTTCTCATTTAACCCCCTCTCTGCAGT
AGTCAGTAGAACACCTCTTCAGTTCCAATAGACGCTACAGATATCAACTT
ACTTTGTCCACTCTTTCACTGCCATACTGCATCATAATTACCTCCCTGTC
TTCCATCCCTCATTCCCTCCCAGAGACCCCAAGTTTCACCTTCCCTCCAC
CGCCCTTCTTTTTGTCAACCAAGAGCCCATCCGCCCCCTCCCCCTCCTCG
TCGCTTATAACAAGCCTCTGGGCGTGCACTCCACAATGGGTGATCCTATG
GGTCGCCCGAATCTTGAAGATACATTACATCCTCGTCTCGCCAAATTGTT
TCATCCTGTCGGCAGGCTTGACGCTGACACCACGGGCTTGCTTTTATTTT
CAATCGATGGACAACTAACCCAGCGACTGTTACACCCCTCGGGAAACGTG
CAGAGAGAATATCTGGCAACTGTCGAGTTGGGGGATGAGGGGGAGGGAGG
GAAGGACAAGTTTGACGAAGCAAAGCTGAGGGAGACGTTGAAGCAGGGAG
TGGAAACAGCGGATGGCACATACCCTGCCGAATTGTTAGGGGTGTCGGAA
GCGATTAAAAAAGAGATAGTTGAAAAAGAGGAGGAGGATGGGGAGGAAGG
AGGGGAGAAGACAAAAGGTCTACTTGTACTGCGTGTTGGCGTGTCGGAAG
GGAAGCATCGGATGGTTCGTCGATTGCTTGCAAATGCGGGCTACCCTGTC
GTAGGCTTGCATCGAGTAAGGTACGGTAGGGTAGAGTTGGGAGATTTGGC
CGAGGGCGAAATCGTGGAGATAGATGATGCAAGTGACGTTGGACAGTGGG
CTAGGCGGATGATGGAAGGGAAACATTAGTTATGAAATTAATAATTGATG
ATGGGAAGGGGAGGGACGTAAGAGGGTAATCGAGCCAAGCTGGTACATAT
GAGCCAGACAAAGTACACTACAGATTGCATATGGTGTGATAGAGCTGTTG
ATTCGTTGTGTAGGACGCTTTGGTCTTGATTTCGTGGCCTTTTGCTGGCT
TTATGGGCCACAACGTCATGCTCTGGTGGT back to topCoding sequence (CDS) from alignment at scaffold_5:876581..877860+ >mRNA_2663 ID=mRNA_2663|Name=jgi.p|Nanoce1779_2|581108|organism=Nannochloropsis oceanica|type=CDS|length=1632bp|location=Sequence derived from alignment at scaffold_5:876581..877860+ (Nannochloropsis oceanica)
ATGTTTCGTCTTGACCGACTTCTGGCCAACCGAGGGGTAGGCAGTCGGAC
GGAGGTCACGGTGTTGGTGCGTCGGGGAAAAGTGGCATTACAGAATGGGG
AGGTGATCAAAGACCCCAAGTTTCACCTTCCCTCCACCGCCCTTCTTTTT
GTCAACCAAGAGCCCATCCGCCCCCTCCCCCTCCTCGTCGCTTATAACAA
GCCTCTGGGCGTGCACTCCACAATGGGTGATCCTATGGGTCGCCCGAATC
TTGAAGATACATTACATCCTCGTCTCGCCAAATTGTTTCATCCTGTCGGC
AGGCTTGACGCTGACACCACGGGCTTGCTTTTATTTTCAATCGATGGACA
ACTAACCCAGCGACTGTTACACCCCTCGGGAAACGTGCAGAGAGAATATC
TGGCAACTGTCGAGTTGGGGGATGAGGGGGAGGGAGGGAAGGACAAGTTT
GACGAAGCAAAGCTGAGGGAGACGTTGAAGCAGGGAGTGGAAACAGCGGA
TGGCACATACCCTGCCGAATTGTTAGGGGTGTCGGAAGCGATTAAAAAAG
AGATAGTTGAAAAAGAGGAGGAGGATGGGGAGGAAGGAGGGGAGAAGACA
AAAGGTCTACTTGTACTGCGTGTTGGCGTGTCGGAAGGGAAGCATCGGAT
GGTTCGTCGATTGCTTGCAAATGCGGGCTACCCTGTCGTAGGCTTGCATC
GAGTAAGGTACGGTAGGGTAGAGTTGGGAGATTTGGCCGAGGGCGAAATC
GTGGAGATAGATGATGCAAGTGACGTTGGACAGTGGGCTAGGCGGATGAT
GGAAGGGAAACATTAGATGTTTCGTCTTGACCGACTTCTGGCCAACCGAG
GGGTAGGCAGTCGGACGGAGGTCACGGTGTTGGTGCGTCGGGGAAAAGTG
GCATTACAGAATGGGGAGGTGATCAAAGACCCCAAGTTTCACCTTCCCTC
CACCGCCCTTCTTTTTGTCAACCAAGAGCCCATCCGCCCCCTCCCCCTCC
TCGTCGCTTATAACAAGCCTCTGGGCGTGCACTCCACAATGGGTGATCCT
ATGGGTCGCCCGAATCTTGAAGATACATTACATCCTCGTCTCGCCAAATT
GTTTCATCCTGTCGGCAGGCTTGACGCTGACACCACGGGCTTGCTTTTAT
TTTCAATCGATGGACAACTAACCCAGCGACTGTTACACCCCTCGGGAAAC
GTGCAGAGAGAATATCTGGCAACTGTCGAGTTGGGGGATGAGGGGGAGGG
AGGGAAGGACAAGTTTGACGAAGCAAAGCTGAGGGAGACGTTGAAGCAGG
GAGTGGAAACAGCGGATGGCACATACCCTGCCGAATTGTTAGGGGTGTCG
GAAGCGATTAAAAAAGAGATAGTTGAAAAAGAGGAGGAGGATGGGGAGGA
AGGAGGGGAGAAGACAAAAGGTCTACTTGTACTGCGTGTTGGCGTGTCGG
AAGGGAAGCATCGGATGGTTCGTCGATTGCTTGCAAATGCGGGCTACCCT
GTCGTAGGCTTGCATCGAGTAAGGTACGGTAGGGTAGAGTTGGGAGATTT
GGCCGAGGGCGAAATCGTGGAGATAGATGATGCAAGTGACGTTGGACAGT
GGGCTAGGCGGATGATGGAAGGGAAACATTAG back to top
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