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Properties
| Property Name | Value |
|---|
| TranscriptId | 576844 |
| Track | FilteredModels2 |
| ProteinId | 576758 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:664505..665826 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_266 ID=mRNA_266|Name=jgi.p|Nanoce1779_2|576758|organism=Nannochloropsis oceanica|type=mRNA|length=1194bp
AGGATTTGCGCACCGATCAGCCCAGCGCGGCCGGGATAATCCGGCAAGGA
TCCTCCTGCACGCCAAGGGGCTGAACCGAGCTGCGCAACATTCAGCATAA
GCCACCTGCGGGGCCAAGTCAGGAGAGAGCGAGGATCCAGGTGGCAAGCG
ACCGTGTCCCCAATTTTCTCTGGCGGCAGGGGTTCATCTGCAAAGCTTTC
TTTTGTCGACTCCACTCGTGATACCATGGTAGCATCAGATGGGGACGCGC
TAAGTAAAGTCTTGGAGCACCTGAAAAATGTCAAACTCGAGTCAGAGGAA
CGACTCTTTGCGATGAAAGCTCAACTTCAAGCCCGGGCGTCCCAAGTGGA
GGAGGCACAGAAGCGCCAAGCCCAGTTAGAAGACGAACTCGACTTTCAGC
AAAGCCAACTCGAGGAACTCCGCCGCCAGCAATCCCGAAAACACCGTTTG
GAGGCCTTGGATGATTGGAAGGCGCTCGTACAGCAACTGCAGGCAGATCG
AAAGCGGTTGGGTGATGAGGTGGATGAACTAAGGAGTGAACGGAGGCTTC
TGATTGCGGAGCTGAAGAAGCACCTGGGTGAAACAACAAAAAATAGGGAG
ACAGAATCGAGTTCAATTGATGTTGATGATCGGCAGTTGGTGAAAGCCTT
GGCGGTGAATGGTGGGGGGGCTATTGCGGGGGAAGCAGACGCGTTGCTGC
TGTTGGAGGGGCAGGAGGCGGGGGACTTGAGGCGGTTGCGGAAGCATTGT
GAGATGCTGGAACTACAGAATAGGAGGAGTCAGTTGGAGATTCAGAGATT
GCGAGAACAGGTCCGGAGGGATGATGGCTTGCTTAAGGCGTGGGGACGGG
CAGCAGGAACATTGGGGAATTATTTTGGCCTGTTTGGTGGGAGTGGGATG
AGAACGGTGAAGAAGGTGAACCATCCTGTTATCCAGGTGTAGGAAAATGC
GCGAGGCAATGAGCATTTCTTGCTGCTCTGTGCGTGTGTGTATGTATGAC
TTGTTCTTTGAAGGCATGGAATCCTCTAACAATAGTATGTATATAGAAAG
AAATGCGTGTGAGATGGAGGGACGAGAGGCATTTATCGAGAAGAATTCTG
ATGTCCTGCCGAGAAAAAAGTGGCTGAAAAGTGTGAATGATGTTTGCTCA
AAGAAAGGAAAGAAAAAGGCAAGAGCTCTTGGTATTTTGATATT back to topprotein sequence of jgi.p|Nanoce1779_2|576758 >mRNA_266-protein ID=mRNA_266-protein|Name=jgi.p|Nanoce1779_2|576758|organism=Nannochloropsis oceanica|type=polypeptide|length=239bp
MVASDGDALSKVLEHLKNVKLESEERLFAMKAQLQARASQVEEAQKRQAQ
LEDELDFQQSQLEELRRQQSRKHRLEALDDWKALVQQLQADRKRLGDEVD
ELRSERRLLIAELKKHLGETTKNRETESSSIDVDDRQLVKALAVNGGGAI
AGEADALLLLEGQEAGDLRRLRKHCEMLELQNRRSQLEIQRLREQVRRDD
GLLKAWGRAAGTLGNYFGLFGGSGMRTVKKVNHPVIQV* back to topmRNA from alignment at scaffold_3:664505..665826+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_266 ID=mRNA_266|Name=jgi.p|Nanoce1779_2|576758|organism=Nannochloropsis oceanica|type=mRNA|length=1322bp|location=Sequence derived from alignment at scaffold_3:664505..665826+ (Nannochloropsis oceanica)
AGGATTTGCGCACCGATCAGCCCAGCGCGGCCGGGATAATCCGGCAAGGA
TCCTCCTGCACGCCAAGGGGCTGAACCGAGCTGCGCAACATTCAGCATAA
GCCACCTGCGGGGCCAAGTCAGGAGAGAGCGAGGATCCAGGTGGCAAGCG
ACCGTGTCCCCAATTTTCTCTGGCGGCAGGGGTTCATCTGCAAAGCTTTC
TTTTGTCGACTCCACTCGTGATACCATGGTAGCATCAGATGGGGTACGTG
AATATCGACTGTGTACGCGTGCCCGCGCTTTATCCTCTTCTCCTCGTCTC
CACACCTCCATTTCCCGCTTTTTGTCGCTCCATTACGCTCATTTACTCGC
AAACCTATACGAATTCAACAGGACGCGCTAAGTAAAGTCTTGGAGCACCT
GAAAAATGTCAAACTCGAGTCAGAGGAACGACTCTTTGCGATGAAAGCTC
AACTTCAAGCCCGGGCGTCCCAAGTGGAGGAGGCACAGAAGCGCCAAGCC
CAGTTAGAAGACGAACTCGACTTTCAGCAAAGCCAACTCGAGGAACTCCG
CCGCCAGCAATCCCGAAAACACCGTTTGGAGGCCTTGGATGATTGGAAGG
CGCTCGTACAGCAACTGCAGGCAGATCGAAAGCGGTTGGGTGATGAGGTG
GATGAACTAAGGAGTGAACGGAGGCTTCTGATTGCGGAGCTGAAGAAGCA
CCTGGGTGAAACAACAAAAAATAGGGAGACAGAATCGAGTTCAATTGATG
TTGATGATCGGCAGTTGGTGAAAGCCTTGGCGGTGAATGGTGGGGGGGCT
ATTGCGGGGGAAGCAGACGCGTTGCTGCTGTTGGAGGGGCAGGAGGCGGG
GGACTTGAGGCGGTTGCGGAAGCATTGTGAGATGCTGGAACTACAGAATA
GGAGGAGTCAGTTGGAGATTCAGAGATTGCGAGAACAGGTCCGGAGGGAT
GATGGCTTGCTTAAGGCGTGGGGACGGGCAGCAGGAACATTGGGGAATTA
TTTTGGCCTGTTTGGTGGGAGTGGGATGAGAACGGTGAAGAAGGTGAACC
ATCCTGTTATCCAGGTGTAGGAAAATGCGCGAGGCAATGAGCATTTCTTG
CTGCTCTGTGCGTGTGTGTATGTATGACTTGTTCTTTGAAGGCATGGAAT
CCTCTAACAATAGTATGTATATAGAAAGAAATGCGTGTGAGATGGAGGGA
CGAGAGGCATTTATCGAGAAGAATTCTGATGTCCTGCCGAGAAAAAAGTG
GCTGAAAAGTGTGAATGATGTTTGCTCAAAGAAAGGAAAGAAAAAGGCAA
GAGCTCTTGGTATTTTGATATT back to topCoding sequence (CDS) from alignment at scaffold_3:664505..665826+ >mRNA_266 ID=mRNA_266|Name=jgi.p|Nanoce1779_2|576758|organism=Nannochloropsis oceanica|type=CDS|length=1434bp|location=Sequence derived from alignment at scaffold_3:664505..665826+ (Nannochloropsis oceanica)
ATGGTAGCATCAGATGGGGACGCGCTAAGTAAAGTCTTGGAGCACCTGAA
AAATGTCAAACTCGAGTCAGAGGAACGACTCTTTGCGATGAAAGCTCAAC
TTCAAGCCCGGGCGTCCCAAGTGGAGGAGGCACAGAAGCGCCAAGCCCAG
TTAGAAGACGAACTCGACTTTCAGCAAAGCCAACTCGAGGAACTCCGCCG
CCAGCAATCCCGAAAACACCGTTTGGAGGCCTTGGATGATTGGAAGGCGC
TCGTACAGCAACTGCAGGCAGATCGAAAGCGGTTGGGTGATGAGGTGGAT
GAACTAAGGAGTGAACGGAGGCTTCTGATTGCGGAGCTGAAGAAGCACCT
GGGTGAAACAACAAAAAATAGGGAGACAGAATCGAGTTCAATTGATGTTG
ATGATCGGCAGTTGGTGAAAGCCTTGGCGGTGAATGGTGGGGGGGCTATT
GCGGGGGAAGCAGACGCGTTGCTGCTGTTGGAGGGGCAGGAGGCGGGGGA
CTTGAGGCGGTTGCGGAAGCATTGTGAGATGCTGGAACTACAGAATAGGA
GGAGTCAGTTGGAGATTCAGAGATTGCGAGAACAGGTCCGGAGGGATGAT
GGCTTGCTTAAGGCGTGGGGACGGGCAGCAGGAACATTGGGGAATTATTT
TGGCCTGTTTGGTGGGAGTGGGATGAGAACGGTGAAGAAGGTGAACCATC
CTGTTATCCAGGTGTAGATGGTAGCATCAGATGGGGACGCGCTAAGTAAA
GTCTTGGAGCACCTGAAAAATGTCAAACTCGAGTCAGAGGAACGACTCTT
TGCGATGAAAGCTCAACTTCAAGCCCGGGCGTCCCAAGTGGAGGAGGCAC
AGAAGCGCCAAGCCCAGTTAGAAGACGAACTCGACTTTCAGCAAAGCCAA
CTCGAGGAACTCCGCCGCCAGCAATCCCGAAAACACCGTTTGGAGGCCTT
GGATGATTGGAAGGCGCTCGTACAGCAACTGCAGGCAGATCGAAAGCGGT
TGGGTGATGAGGTGGATGAACTAAGGAGTGAACGGAGGCTTCTGATTGCG
GAGCTGAAGAAGCACCTGGGTGAAACAACAAAAAATAGGGAGACAGAATC
GAGTTCAATTGATGTTGATGATCGGCAGTTGGTGAAAGCCTTGGCGGTGA
ATGGTGGGGGGGCTATTGCGGGGGAAGCAGACGCGTTGCTGCTGTTGGAG
GGGCAGGAGGCGGGGGACTTGAGGCGGTTGCGGAAGCATTGTGAGATGCT
GGAACTACAGAATAGGAGGAGTCAGTTGGAGATTCAGAGATTGCGAGAAC
AGGTCCGGAGGGATGATGGCTTGCTTAAGGCGTGGGGACGGGCAGCAGGA
ACATTGGGGAATTATTTTGGCCTGTTTGGTGGGAGTGGGATGAGAACGGT
GAAGAAGGTGAACCATCCTGTTATCCAGGTGTAG back to top
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