Properties
| Property Name | Value |
|---|
| TranscriptId | 581097 |
| Track | FilteredModels2 |
| ProteinId | 581011 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:818205..821220 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2637 ID=mRNA_2637|Name=jgi.p|Nanoce1779_2|581011|organism=Nannochloropsis oceanica|type=mRNA|length=2321bp
ACAGATCAAGATGGTTCAGCTGGGGACTTTGCTGGCAGTGCTCTTTCCCG
TATCATCAGCCTTTGTCTTTCCAAGCGCACCTGTCCTCTCTTCTTCGCTC
TGCTCCCGTACGCGCTCCTCGGGCGCGCTCTCCATGCAATATGGCGCCCT
GCAAGATAAGCCCTTAAAGGTTATCATTGCCGGTGGTGGGATTGGTGGCT
TGGTTCTCGCCAACGCACTGCAACGCCATGGCATCACCTACGATTTGTAC
GAGAAAACGAAGGAATACCGACCATTCGGGGGTCCGATTCAAGTGCAATC
CAATGCGCTTGCGGCCTTGGAAGCGATCAACAAGGACATGACTCAACGAA
TTATGGACGCAGGAACCACAACTGGGAATCGAGTGAATGGGTTGAAAGAC
GGGATGACCAATAAGTGGTACTGCCAGTTCGACACCGGCGCTCCTGCACA
AAAAAGAGGCTTGCCGCTCACTCGGGTGGTGGATCGACCGGACCTCCAGA
ACATTTTGCTGGATTACATCGACCAGAGTCGTCTGCACACGGGGGTAGAA
GTGTCGGAGTACTCCCAGATGGCCGATGGTAGTGTTGAGGTGGTGCTGAC
GAACGGAGAGAAAGTTCAAGGCGATGTTTTAGTGGGGGCAGACGGGATCT
GGTCCAACATTCGTGGGCAAATGCATAAAGAAAGCCCGGGGAAGGAGAGT
GCGACATACTCGGGATACACCTGTTTCACGGGTGTGTGTATGGCTCGCCC
TGCCGACGTGAAGGAGGTTGCCTATAAAGTTTACCTTGCTGCGGGCAAGT
ATTTTGTGTGCTCCGATGTGGGGAAGGGTCGAATGCAGTGGTACGCCATG
CTGGGACAGCCGGCGGGGGAGAAGGTCCCTGATGGCGTGCAAGGCGCGCA
CCTTGTGAAGGAATACCAGGGGTGGAGCAGGGAGGTGCTCGAGTTACTGG
AAATCACGAAGGAGGAGGATATCAACCAGAGGGATTTGTACGACCGCCCC
CCCCTCCTTGTCAAAGGGTGGGCTAAGGGGCCTGTGGCGGTGCTGGGAGA
CGCAGCTCACCCGATGATGCCCAATCTGGGGCAGGGCGGCTGCCAGGCGG
TGGAAGACGGATACAGGCTAGCGCAGGAGCTGAGCAAGATCACCGACAGG
GGGGATGTGGCGTGGGCCTTGCGGATGTATGAGCAGCAGAGGCTGGTGAG
GAGCAGTGCCGTGCACGGCTTGGCGCGGATTGCGTCTGACGTGTTGTTCC
AGAGTAAGCTGTTGTTCACAAACCCGGTGATTGGAAAGTTCGTGGGATTG
ATGATGACGATTAGCATGCCGTTAATTTTGGAGTTTTTGTACCAGAATGT
TTTGGATGAGAGCGACTGGGGTTCTGCCAGGGGCCGGTTGAGCAACATGG
CTGCTTATGAGGACCAAAGCAACACGTACAAGTCAGTAAGGGAAGCTCAA
GCGGCCCTGGCTGCCAAAGAGACGGTTGCTGTCTAGACAGGGGAGGGCAT
TGAGAACTGAAGGAGGTAACCGTCTCTTGTGTCTCGGGTGCGTCGGCCGC
TCCCGCAGCGGCCGACGCACAAAGCAGTATCAGCAGTAGTAGCAGCATCA
GCAGCAGCATTAACGCGTAGGAATAAAAGTGGAGAGGAAAAGGAGAAGGA
ATAATGTTTAGACAAAAGATCAGAGAGGGCCCTTTTTTTTTTAATTCAGT
CCAAATATCAAGGGGTACAGAAAGCTCTCGCGCTGTGGTGTTGTATTTGT
CGTTGCCTGGGCTCTTTATTTTGCTTGTATTGTATAGTAGGAGGGGTGAA
TTGAAAGAGAAGGGGGGAAGGGGGGAGAGAGGGAAGACGGGAGAAAGTGG
TGGATTGGAAGAGGCATAGCGGCAGGGCGACGACTGTCTGGGGGAGGGAG
ACGATGGTGTGAGTGACGCATCGGTCTGTGCCTCTGGATGTGCCGTGGTT
TAACTGTTCTTATTCAAATTTGAGTTGTGACCAGCAGTTTCTCCATTATT
GACTTGTAATTTGATTTTTCGTTCCGTAAGAAAGAAAAGAAGATGAAGAG
GAAAGAGACGATTTGACAAAAGGTAAAAGAGAAGAATAAAGAAGACGACG
AAGACGAGAGGGATGAAGTTTAAAAGTTTCCTTTTATTTTCTTTTTCAGT
CTGTCTCCCCCCGTCAAATTCCAGCTGTCTATGAAGAAAACGGACAAGAA
TCGTCATGGCAATCAATTGTACCTCATGCCACGACGGAATACGTGGGTAT
TCGTCGTAAAATTCGTCGAGAGAGCGAGCGAATGAGAAAAAGCGTGAAAG
CAAATTTCAAAATGAAATCAC back to topprotein sequence of jgi.p|Nanoce1779_2|581011 >mRNA_2637-protein ID=mRNA_2637-protein|Name=jgi.p|Nanoce1779_2|581011|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MVQLGTLLAVLFPVSSAFVFPSAPVLSSSLCSRTRSSGALSMQYGALQDK
PLKVIIAGGGIGGLVLANALQRHGITYDLYEKTKEYRPFGGPIQVQSNAL
AALEAINKDMTQRIMDAGTTTGNRVNGLKDGMTNKWYCQFDTGAPAQKRG
LPLTRVVDRPDLQNILLDYIDQSRLHTGVEVSEYSQMADGSVEVVLTNGE
KVQGDVLVGADGIWSNIRGQMHKESPGKESATYSGYTCFTGVCMARPADV
KEVAYKVYLAAGKYFVCSDVGKGRMQWYAMLGQPAGEKVPDGVQGAHLVK
EYQGWSREVLELLEITKEEDINQRDLYDRPPLLVKGWAKGPVAVLGDAAH
PMMPNLGQGGCQAVEDGYRLAQELSKITDRGDVAWALRMYEQQRLVRSSA
VHGLARIASDVLFQSKLLFTNPVIGKFVGLMMTISMPLILEFLYQNVLDE
SDWGSARGRLSNMAAYEDQSNTYKSVREAQAALAAKETVAV* back to topmRNA from alignment at scaffold_5:818205..821220+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2637 ID=mRNA_2637|Name=jgi.p|Nanoce1779_2|581011|organism=Nannochloropsis oceanica|type=mRNA|length=3016bp|location=Sequence derived from alignment at scaffold_5:818205..821220+ (Nannochloropsis oceanica)
ACAGATCAAGATGGTTCAGCTGGGGACTTTGCTGGCAGTGCTCTTTCCCG
TATCATCAGGTGAGTGACTCAGTCGCCTTGGATCGATCGATAGGATGAAA
ATAGGGGGGCATGAACGAATGCCCCCAGCACGTGTCCTTTCGCTGGGATG
GGTGTCCGTACATTTGAGGGGGCCTGCTACTAAAGCCGTACAGACGGTGT
CTAGTGCGTTATGCCATTGTGCTTGCCTTGATTATTGCGGGGAGTTGATG
CTACGTTCTGAGCAGGGCGTCATGTAGCCCTCCTGACCTACAAGATCAAC
AGTGAAGAAGAGCGCCGACACATGCCACCACACCCTAAATTGTTACCACA
ACATCCTCAAGGTTCAGTTCTTCCTACACACGCCCTGCGATGTTTTATTG
TCTCGTCCTCCCTCACTTCCCGGCTTCAGGTTTTGGCGGCATCAGGCAAG
GCCCTGATAGCATATTAATTCTATGAAGAGAGTAACGAGCTCCCCCTCGT
CCACAAGCCCACGGCATGCAATCTCTCCACGCTCACATCCCTCTTCTGAC
TTCCGCAAGGGGCTGCACCCTTTATCACCTTCTCGCGCCCTCACTTCTCC
CCTTTCCGTCTCCCCCCCTAACAACGCCGGGGCTCAAAACTTTCCCTGAA
CAGCAATCAAGCGTCTTAACCCTCTGAATGTAACTGAACCCCCCAGTCTC
TATTAACTGTCTCTAATACCCTCAATATTTTTTCTCGTACGTATTCAACC
ACAGCCTTTGTCTTTCCAAGCGCACCTGTCCTCTCTTCTTCGCTCTGCTC
CCGTACGCGCTCCTCGGGCGCGCTCTCCATGCAATATGGCGCCCTGCAAG
ATAAGCCCTTAAAGGTTATCATTGCCGGTGGTGGGATTGGTGGCTTGGTT
CTCGCCAACGCACTGCAACGCCATGGCATCACCTACGATTTGTACGAGAA
AACGAAGGAATACCGACCATTCGGGGGTCCGATTCAAGTGCAATCCAATG
CGCTTGCGGCCTTGGAAGCGATCAACAAGGACATGACTCAACGAATTATG
GACGCAGGAACCACAACTGGGAATCGAGTGAATGGGTTGAAAGACGGGAT
GACCAATAAGTGGTACTGCCAGTTCGACACCGGCGCTCCTGCACAAAAAA
GAGGCTTGCCGCTCACTCGGGTGGTGGATCGACCGGACCTCCAGAACATT
TTGCTGGATTACATCGACCAGAGTCGTCTGCACACGGGGGTAGAAGTGTC
GGAGTACTCCCAGATGGCCGATGGTAGTGTTGAGGTGGTGCTGACGAACG
GAGAGAAAGTTCAAGGCGATGTTTTAGTGGGGGCAGACGGGATCTGGTCC
AACATTCGTGGGCAAATGCATAAAGAAAGCCCGGGGAAGGAGAGTGCGAC
ATACTCGGGATACACCTGTTTCACGGGTGTGTGTATGGCTCGCCCTGCCG
ACGTGAAGGAGGTTGCCTATAAAGTTTACCTTGCTGCGGGCAAGTATTTT
GTGTGCTCCGATGTGGGGAAGGGTCGAATGCAGTGGTACGCCATGCTGGG
ACAGCCGGCGGGGGAGAAGGTCCCTGATGGCGTGCAAGGCGCGCACCTTG
TGAAGGAATACCAGGGGTGGAGCAGGGAGGTGCTCGAGTTACTGGAAATC
ACGAAGGAGGAGGATATCAACCAGAGGGATTTGTACGACCGCCCCCCCCT
CCTTGTCAAAGGGTGGGCTAAGGGGCCTGTGGCGGTGCTGGGAGACGCAG
CTCACCCGATGATGCCCAATCTGGGGCAGGGCGGCTGCCAGGCGGTGGAA
GACGGATACAGGCTAGCGCAGGAGCTGAGCAAGATCACCGACAGGGGGGA
TGTGGCGTGGGCCTTGCGGATGTATGAGCAGCAGAGGCTGGTGAGGAGCA
GTGCCGTGCACGGCTTGGCGCGGATTGCGTCTGACGTGTTGTTCCAGAGT
AAGCTGTTGTTCACAAACCCGGTGATTGGAAAGTTCGTGGGATTGATGAT
GACGATTAGCATGCCGTTAATTTTGGAGTTTTTGTACCAGAATGTTTTGG
ATGAGAGCGACTGGGGTTCTGCCAGGGGCCGGTTGAGCAACATGGCTGCT
TATGAGGACCAAAGCAACACGTACAAGTCAGTAAGGGAAGCTCAAGCGGC
CCTGGCTGCCAAAGAGACGGTTGCTGTCTAGACAGGGGAGGGCATTGAGA
ACTGAAGGAGGTAACCGTCTCTTGTGTCTCGGGTGCGTCGGCCGCTCCCG
CAGCGGCCGACGCACAAAGCAGTATCAGCAGTAGTAGCAGCATCAGCAGC
AGCATTAACGCGTAGGAATAAAAGTGGAGAGGAAAAGGAGAAGGAATAAT
GTTTAGACAAAAGATCAGAGAGGGCCCTTTTTTTTTTAATTCAGTCCAAA
TATCAAGGGGTACAGAAAGCTCTCGCGCTGTGGTGTTGTATTTGTCGTTG
CCTGGGCTCTTTATTTTGCTTGTATTGTATAGTAGGAGGGGTGAATTGAA
AGAGAAGGGGGGAAGGGGGGAGAGAGGGAAGACGGGAGAAAGTGGTGGAT
TGGAAGAGGCATAGCGGCAGGGCGACGACTGTCTGGGGGAGGGAGACGAT
GGTGTGAGTGACGCATCGGTCTGTGCCTCTGGATGTGCCGTGGTTTAACT
GTTCTTATTCAAATTTGAGTTGTGACCAGCAGTTTCTCCATTATTGACTT
GTAATTTGATTTTTCGTTCCGTAAGAAAGAAAAGAAGATGAAGAGGAAAG
AGACGATTTGACAAAAGGTAAAAGAGAAGAATAAAGAAGACGACGAAGAC
GAGAGGGATGAAGTTTAAAAGTTTCCTTTTATTTTCTTTTTCAGTCTGTC
TCCCCCCGTCAAATTCCAGCTGTCTATGAAGAAAACGGACAAGAATCGTC
ATGGCAATCAATTGTACCTCATGCCACGACGGAATACGTGGGTATTCGTC
GTAAAATTCGTCGAGAGAGCGAGCGAATGAGAAAAAGCGTGAAAGCAAAT
TTCAAAATGAAATCAC back to topCoding sequence (CDS) from alignment at scaffold_5:818205..821220+ >mRNA_2637 ID=mRNA_2637|Name=jgi.p|Nanoce1779_2|581011|organism=Nannochloropsis oceanica|type=CDS|length=2952bp|location=Sequence derived from alignment at scaffold_5:818205..821220+ (Nannochloropsis oceanica)
ATGGTTCAGCTGGGGACTTTGCTGGCAGTGCTCTTTCCCGTATCATCAGC
CTTTGTCTTTCCAAGCGCACCTGTCCTCTCTTCTTCGCTCTGCTCCCGTA
CGCGCTCCTCGGGCGCGCTCTCCATGCAATATGGCGCCCTGCAAGATAAG
CCCTTAAAGGTTATCATTGCCGGTGGTGGGATTGGTGGCTTGGTTCTCGC
CAACGCACTGCAACGCCATGGCATCACCTACGATTTGTACGAGAAAACGA
AGGAATACCGACCATTCGGGGGTCCGATTCAAGTGCAATCCAATGCGCTT
GCGGCCTTGGAAGCGATCAACAAGGACATGACTCAACGAATTATGGACGC
AGGAACCACAACTGGGAATCGAGTGAATGGGTTGAAAGACGGGATGACCA
ATAAGTGGTACTGCCAGTTCGACACCGGCGCTCCTGCACAAAAAAGAGGC
TTGCCGCTCACTCGGGTGGTGGATCGACCGGACCTCCAGAACATTTTGCT
GGATTACATCGACCAGAGTCGTCTGCACACGGGGGTAGAAGTGTCGGAGT
ACTCCCAGATGGCCGATGGTAGTGTTGAGGTGGTGCTGACGAACGGAGAG
AAAGTTCAAGGCGATGTTTTAGTGGGGGCAGACGGGATCTGGTCCAACAT
TCGTGGGCAAATGCATAAAGAAAGCCCGGGGAAGGAGAGTGCGACATACT
CGGGATACACCTGTTTCACGGGTGTGTGTATGGCTCGCCCTGCCGACGTG
AAGGAGGTTGCCTATAAAGTTTACCTTGCTGCGGGCAAGTATTTTGTGTG
CTCCGATGTGGGGAAGGGTCGAATGCAGTGGTACGCCATGCTGGGACAGC
CGGCGGGGGAGAAGGTCCCTGATGGCGTGCAAGGCGCGCACCTTGTGAAG
GAATACCAGGGGTGGAGCAGGGAGGTGCTCGAGTTACTGGAAATCACGAA
GGAGGAGGATATCAACCAGAGGGATTTGTACGACCGCCCCCCCCTCCTTG
TCAAAGGGTGGGCTAAGGGGCCTGTGGCGGTGCTGGGAGACGCAGCTCAC
CCGATGATGCCCAATCTGGGGCAGGGCGGCTGCCAGGCGGTGGAAGACGG
ATACAGGCTAGCGCAGGAGCTGAGCAAGATCACCGACAGGGGGGATGTGG
CGTGGGCCTTGCGGATGTATGAGCAGCAGAGGCTGGTGAGGAGCAGTGCC
GTGCACGGCTTGGCGCGGATTGCGTCTGACGTGTTGTTCCAGAGTAAGCT
GTTGTTCACAAACCCGGTGATTGGAAAGTTCGTGGGATTGATGATGACGA
TTAGCATGCCGTTAATTTTGGAGTTTTTGTACCAGAATGTTTTGGATGAG
AGCGACTGGGGTTCTGCCAGGGGCCGGTTGAGCAACATGGCTGCTTATGA
GGACCAAAGCAACACGTACAAGTCAGTAAGGGAAGCTCAAGCGGCCCTGG
CTGCCAAAGAGACGGTTGCTGTCTAGATGGTTCAGCTGGGGACTTTGCTG
GCAGTGCTCTTTCCCGTATCATCAGCCTTTGTCTTTCCAAGCGCACCTGT
CCTCTCTTCTTCGCTCTGCTCCCGTACGCGCTCCTCGGGCGCGCTCTCCA
TGCAATATGGCGCCCTGCAAGATAAGCCCTTAAAGGTTATCATTGCCGGT
GGTGGGATTGGTGGCTTGGTTCTCGCCAACGCACTGCAACGCCATGGCAT
CACCTACGATTTGTACGAGAAAACGAAGGAATACCGACCATTCGGGGGTC
CGATTCAAGTGCAATCCAATGCGCTTGCGGCCTTGGAAGCGATCAACAAG
GACATGACTCAACGAATTATGGACGCAGGAACCACAACTGGGAATCGAGT
GAATGGGTTGAAAGACGGGATGACCAATAAGTGGTACTGCCAGTTCGACA
CCGGCGCTCCTGCACAAAAAAGAGGCTTGCCGCTCACTCGGGTGGTGGAT
CGACCGGACCTCCAGAACATTTTGCTGGATTACATCGACCAGAGTCGTCT
GCACACGGGGGTAGAAGTGTCGGAGTACTCCCAGATGGCCGATGGTAGTG
TTGAGGTGGTGCTGACGAACGGAGAGAAAGTTCAAGGCGATGTTTTAGTG
GGGGCAGACGGGATCTGGTCCAACATTCGTGGGCAAATGCATAAAGAAAG
CCCGGGGAAGGAGAGTGCGACATACTCGGGATACACCTGTTTCACGGGTG
TGTGTATGGCTCGCCCTGCCGACGTGAAGGAGGTTGCCTATAAAGTTTAC
CTTGCTGCGGGCAAGTATTTTGTGTGCTCCGATGTGGGGAAGGGTCGAAT
GCAGTGGTACGCCATGCTGGGACAGCCGGCGGGGGAGAAGGTCCCTGATG
GCGTGCAAGGCGCGCACCTTGTGAAGGAATACCAGGGGTGGAGCAGGGAG
GTGCTCGAGTTACTGGAAATCACGAAGGAGGAGGATATCAACCAGAGGGA
TTTGTACGACCGCCCCCCCCTCCTTGTCAAAGGGTGGGCTAAGGGGCCTG
TGGCGGTGCTGGGAGACGCAGCTCACCCGATGATGCCCAATCTGGGGCAG
GGCGGCTGCCAGGCGGTGGAAGACGGATACAGGCTAGCGCAGGAGCTGAG
CAAGATCACCGACAGGGGGGATGTGGCGTGGGCCTTGCGGATGTATGAGC
AGCAGAGGCTGGTGAGGAGCAGTGCCGTGCACGGCTTGGCGCGGATTGCG
TCTGACGTGTTGTTCCAGAGTAAGCTGTTGTTCACAAACCCGGTGATTGG
AAAGTTCGTGGGATTGATGATGACGATTAGCATGCCGTTAATTTTGGAGT
TTTTGTACCAGAATGTTTTGGATGAGAGCGACTGGGGTTCTGCCAGGGGC
CGGTTGAGCAACATGGCTGCTTATGAGGACCAAAGCAACACGTACAAGTC
AGTAAGGGAAGCTCAAGCGGCCCTGGCTGCCAAAGAGACGGTTGCTGTCT
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