Properties
| Property Name | Value |
|---|
| TranscriptId | 628733 |
| Track | FilteredModels2 |
| ProteinId | 628647 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:812730..814323 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2634 ID=mRNA_2634|Name=jgi.p|Nanoce1779_2|628647|organism=Nannochloropsis oceanica|type=mRNA|length=1140bp
ATGGCCCGCCGCGCTGCCATCATCGGTACGCCCGCTCCAGTCCTCCTCTT
CCTTGCTGTCATTTCTATCCTTATCGGCACGTCCTTATCGGAGGCGTTTA
TCATGCCCGTCCACTCCATTGTCGCTGCTAGAAGAAGAGCGCTCACTTCA
TCTTCGATCGTGTCGATGAGCACCAGCATCGAGGAAGGCCCCTCTTCCCC
TGCCGCCACTTCCACGCCCACTGGCAGCAGCGATACGGGTCATAAGGCTG
ATCCCCCATGCAAAAAGTACCCCAAATGCAACGGGGCCTATCTAGGCAAA
GGTTGCGACGGCGCGGGCAAGATCCAAGGCGGCATTGCCACCTTTCCGCT
TTTGGGCTGGTGGCCGATCAAGGCATACAGGCCATGCCCGGCTTTGACCG
AGGCCGGCTATGGATACAAGCGGAAAGGACAGGACTTCTCGGAGTTTATC
GCAGGCGAGCGACGCACGAGGACCGAGGATGACGAATGAAAATGACTTTT
TGGCGAGCTACAGAGGGAGAGATGAACGAAGACGCCTTTGTCAGTGGCCT
GCCAAGTCACGTGTTTGGGTCGGATGTGAGGGGATTTTTCTTTTAAATCT
TGCTGCTGGAGTCCATGTGGAGAGGAGGAAGCTGGAGAGTGGTTAAAGGG
CCAAAGAAGAATGGAGGGACAGAAAAATCGAAGAAAGACGTCACAATCTG
CCATTTATCGTGCTTTAAATGCTCATTATGCCCGATGGTCTGCATCTTGA
TTGTCCTGTTTTGAAGAAACATGCGCGTGACTATAAAGCTACTGCTAAGA
TGATTTTTAAAAAAGAAGACCCTCGATGAATGGTGGTCATCTTGACTTCC
TCCACACATAACCGTGACAGCGTATTGGGAAAATATTTTTTTATTACTTT
GTCTATTTGGAGGCGGCCGGGTGCGTTTGGCGACCATCCTGGATGGCAAC
CATAATGTCTGTTCTATGGATAGTGTGGCCAAGATTGACGGAAGGAATCG
TGTTTCAGGTACCCTAGGCATGGGGACACTGATGGGAAGCATGTATACCC
GTGCTTCCGAGGATGTTTAAGAGGGATGTGGCGTGCATATGGTCGCTCGT
CGCCGACGAGTTGTCGGGACTTCTCTCAGATGGCCGACCG back to topprotein sequence of jgi.p|Nanoce1779_2|628647 >mRNA_2634-protein ID=mRNA_2634-protein|Name=jgi.p|Nanoce1779_2|628647|organism=Nannochloropsis oceanica|type=polypeptide|length=163bp
MARRAAIIGTPAPVLLFLAVISILIGTSLSEAFIMPVHSIVAARRRALTS
SSIVSMSTSIEEGPSSPAATSTPTGSSDTGHKADPPCKKYPKCNGAYLGK
GCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFI
AGERRTRTEDDE* back to topmRNA from alignment at scaffold_5:812730..814323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2634 ID=mRNA_2634|Name=jgi.p|Nanoce1779_2|628647|organism=Nannochloropsis oceanica|type=mRNA|length=1594bp|location=Sequence derived from alignment at scaffold_5:812730..814323- (Nannochloropsis oceanica)
ATGGCCCGCCGCGCTGCCATCATCGGTACGCCCGCTCCAGTCCTCCTCTT
CCTTGCTGTCATTTCTATCCTTATCGGCACGTCCTTATCGGAGGCGTTTA
TCATGCCCGTCCACTCCATTGTCGCTGCTAGAAGAAGAGCGCTCACTTCA
TCTTCGATCGTGTCGATGAGCACCAGCATCGAGGAAGGCCCCTCTTCCCC
TGCCGCCACTTCCACGCCCACTGGCAGCAGCGATACGGGTCATAAGGCTG
ATCCCCCATGCAAAAAGTACCCCAAATGCAACGGGGCCTATCTAGGCAAA
GGTTGCGACGGCGCGGGCAAGATCCAAGGCGGCATTGCCACCTTTCCGCT
TTTGGGCTGGTGGCCGATCAAGGTAAAAGAGAATGGTCGAAAAAAAGAGA
GGGGTTAATGGATAATAACCGCTCTTTAATGTTTCTGTTCTTTGGGGCTT
TGCCGTTGTACGGAGCGCTCGCGGTTGCGTGTGAGTGTTTGTCTTTGTGT
GTGTGTGTGTCTCTCGGTTGGGGGACTTGTCTCTGCAGGCAATCATGCCT
GCTCCTTAGTTAAGTCCGCCGCATTAACATATGTTCGTGCTCGGCGTCTT
TCTTTTGCTCGCATCATTGCCTCCCCCAGAATTTCTAATGCGCTTCGTAA
GGACGGGATTGCTTACTTTCCTTGCGCCTTAATGAGCCAAAGATGCCAGC
CACCATTTGGTTATATCCATCTCTCTTTTTATTATTCCATTGTTTCTAGT
TTACCCCTCCCGCTTGACTACCTACCAAATTTACCAATGCCTGACGCATA
AATTACACACTTACTATTCTTTCAAGGCATACAGGCCATGCCCGGCTTTG
ACCGAGGCCGGCTATGGATACAAGCGGAAAGGACAGGACTTCTCGGAGTT
TATCGCAGGCGAGCGACGCACGAGGACCGAGGATGACGAATGAAAATGAC
TTTTTGGCGAGCTACAGAGGGAGAGATGAACGAAGACGCCTTTGTCAGTG
GCCTGCCAAGTCACGTGTTTGGGTCGGATGTGAGGGGATTTTTCTTTTAA
ATCTTGCTGCTGGAGTCCATGTGGAGAGGAGGAAGCTGGAGAGTGGTTAA
AGGGCCAAAGAAGAATGGAGGGACAGAAAAATCGAAGAAAGACGTCACAA
TCTGCCATTTATCGTGCTTTAAATGCTCATTATGCCCGATGGTCTGCATC
TTGATTGTCCTGTTTTGAAGAAACATGCGCGTGACTATAAAGCTACTGCT
AAGATGATTTTTAAAAAAGAAGACCCTCGATGAATGGTGGTCATCTTGAC
TTCCTCCACACATAACCGTGACAGCGTATTGGGAAAATATTTTTTTATTA
CTTTGTCTATTTGGAGGCGGCCGGGTGCGTTTGGCGACCATCCTGGATGG
CAACCATAATGTCTGTTCTATGGATAGTGTGGCCAAGATTGACGGAAGGA
ATCGTGTTTCAGGTACCCTAGGCATGGGGACACTGATGGGAAGCATGTAT
ACCCGTGCTTCCGAGGATGTTTAAGAGGGATGTGGCGTGCATATGGTCGC
TCGTCGCCGACGAGTTGTCGGGACTTCTCTCAGATGGCCGACCG back to topCoding sequence (CDS) from alignment at scaffold_5:812730..814323- >mRNA_2634 ID=mRNA_2634|Name=jgi.p|Nanoce1779_2|628647|organism=Nannochloropsis oceanica|type=CDS|length=978bp|location=Sequence derived from alignment at scaffold_5:812730..814323- (Nannochloropsis oceanica)
GCATACAGGCCATGCCCGGCTTTGACCGAGGCCGGCTATGGATACAAGCG
GAAAGGACAGGACTTCTCGGAGTTTATCGCAGGCGAGCGACGCACGAGGA
CCGAGGATGACGAATGAATGGCCCGCCGCGCTGCCATCATCGGTACGCCC
GCTCCAGTCCTCCTCTTCCTTGCTGTCATTTCTATCCTTATCGGCACGTC
CTTATCGGAGGCGTTTATCATGCCCGTCCACTCCATTGTCGCTGCTAGAA
GAAGAGCGCTCACTTCATCTTCGATCGTGTCGATGAGCACCAGCATCGAG
GAAGGCCCCTCTTCCCCTGCCGCCACTTCCACGCCCACTGGCAGCAGCGA
TACGGGTCATAAGGCTGATCCCCCATGCAAAAAGTACCCCAAATGCAACG
GGGCCTATCTAGGCAAAGGTTGCGACGGCGCGGGCAAGATCCAAGGCGGC
ATTGCCACCTTTCCGCTTTTGGGCTGGTGGCCGATCAAGGCATACAGGCC
ATGCCCGGCTTTGACCGAGGCCGGCTATGGATACAAGCGGAAAGGACAGG
ACTTCTCGGAGTTTATCGCAGGCGAGCGACGCACGAGGACCGAGGATGAC
GAATGAATGGCCCGCCGCGCTGCCATCATCGGTACGCCCGCTCCAGTCCT
CCTCTTCCTTGCTGTCATTTCTATCCTTATCGGCACGTCCTTATCGGAGG
CGTTTATCATGCCCGTCCACTCCATTGTCGCTGCTAGAAGAAGAGCGCTC
ACTTCATCTTCGATCGTGTCGATGAGCACCAGCATCGAGGAAGGCCCCTC
TTCCCCTGCCGCCACTTCCACGCCCACTGGCAGCAGCGATACGGGTCATA
AGGCTGATCCCCCATGCAAAAAGTACCCCAAATGCAACGGGGCCTATCTA
GGCAAAGGTTGCGACGGCGCGGGCAAGATCCAAGGCGGCATTGCCACCTT
TCCGCTTTTGGGCTGGTGGCCGATCAAG back to top
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