Properties
| Property Name | Value |
|---|
| TranscriptId | 330883 |
| Track | FilteredModels2 |
| ProteinId | 330797 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:519229..520476 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2507 ID=mRNA_2507|Name=jgi.p|Nanoce1779_2|330797|organism=Nannochloropsis oceanica|type=mRNA|length=795bp
TCAAAAGAACGACCCCTATCATAGAACCTCCTCCTCCACCTCCTCCATCT
CTTTCCTTCCCCTCCGCCCTCCACCCTCAATTATCCACACCCACAGCGGT
ATATCTCTGCACATCCAATCATGTCACAAGTGCCATGGACCCGGATACGC
GAATTCAAAGAGGAGCAGGAACGGAAGAAGCGGCGGGAGTTTGAAGCAGC
CTTGGGTCGGGCGCAACTCCAGGTGCCAGGGCAACAGGACCAGCAGCAAA
GCCAGGGACCAGCAACAGCACGAGCAAAATCTTTTCAAGAGCGCTTTAAG
GAGTCGTATTTCAAAGAGCGACTGATGTTTGGGGGAGTCGTGGGCGCCGT
GACGGGCGCATTTTTTGGCGGACTGGACGCGGTGCAGGGCATCAAGAAGG
GAGAGGCATTTGGTGTGATGCTCAACACGTTGCCCTCCAAGGCCAAGTTT
TCTGGCGAACACATAGGCAGTGCTGCCCTCGTATTTTCCATATTCTATTC
CTCCTACCAAGGCATAAAATACATCAGTAAGGTTGCACGAGACGAGGATG
ATTGGGGAAATCCGGCAACAGCTGCCATCACGACCGTCGCCCCGTTGCTT
CTTTCTGCCACATTTCGTCGCAACGTGCCTTATGCGGTCCTCTTGATAGG
CATGGATGTGTTCAGCGAAGCGACTGCATCCACGCCCTCCTCCACCACCT
CTACTACTAGTTAAGGGAGAGTGAATCTCAAGTGTAAGTATATTTTCCGC
GAACACGAACACAAGAAGAAGGAAAATTTAAAGTCTCGAATCTCG back to topprotein sequence of jgi.p|Nanoce1779_2|330797 >mRNA_2507-protein ID=mRNA_2507-protein|Name=jgi.p|Nanoce1779_2|330797|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MSQVPWTRIREFKEEQERKKRREFEAALGRAQLQVPGQQDQQQSQGPATA
RAKSFQERFKESYFKERLMFGGVVGAVTGAFFGGLDAVQGIKKGEAFGVM
LNTLPSKAKFSGEHIGSAALVFSIFYSSYQGIKYISKVARDEDDWGNPAT
AAITTVAPLLLSATFRRNVPYAVLLIGMDVFSEATASTPSSTTSTTS* back to topmRNA from alignment at scaffold_5:519229..520476- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2507 ID=mRNA_2507|Name=jgi.p|Nanoce1779_2|330797|organism=Nannochloropsis oceanica|type=mRNA|length=1248bp|location=Sequence derived from alignment at scaffold_5:519229..520476- (Nannochloropsis oceanica)
TCAAAAGAACGACCCCTATCATAGAACCTCCTCCTCCACCTCCTCCATCT
CTTTCCTTCCCCTCCGCCCTCCACCCTCAATTATCCACACCCACAGCGGT
ATATCTCTGCACATCCAATCATGTCACAAGTGCCATGGACCCGGATACGC
GAATTCAAAGAGGAGCAGGAACGGAAGAAGCGGCGGGAGTTTGAAGCAGC
CTTGGGTCGGGCGCAACTCCAGGTGCCAGGGCAACAGGACCAGCAGCAAA
GCCAGGGACCAGCAACAGCACGAGCAAAATCTTTTCAAGAGCGCTTTAAG
GAGTCGTATTTCAAAGAGCGACTGATGTTTGGGGGAGTCGTGGGCGCCGT
GACGGGCGCATTTTTTGGCGGACGTAAGTGCTTATGTTTGTGGTAGACAG
ATGGGGACGTTGGTGCTTTTGCGTGACGACTTGGAGAAAGAAAAAGGCAT
GTCGCAGGAGTTCCCTTGACTCTCGAGGCTTCCGGTCGGGGTTTGGTTCG
TCACGGATAACGTTCCTCATCCTCGCACACGAGCTTTCAGGAGAGGTTGG
TAGAAGAGGACGTCAACCCCGGGGACAGACGAGCAACAAATTTGATCGCC
CAGCGATTTCTCGGGGGTCAATGATCTTACTCATTTCCCTCTTTCTTCTT
CCATAATCATAGTGGACGCGGTGCAGGGCATCAAGAAGGGAGAGGCATTT
GGTGTGATGCTCAACACGTTGCCCTCCAAGGCCAAGTTTTCTGGCGAACA
CATAGGCAGTGCTGCCCTCGTATTTTCCATGTACGTGCATGCGCGGGTGA
TTGTCGTCCTCCCGAATTTGTTGTGCGACTGTTCCTTGCATCACGGGTTT
TGGGATTAATGCACGCTTTATCCCGTCTTACTCCTCATATCATATTTCCT
CGGCTTTTTCCTCCCCCCAATTTTCTCCTCTCCTTTTTCCTCAGATTCTA
TTCCTCCTACCAAGGCATAAAATACATCAGTAAGGTTGCACGAGACGAGG
ATGATTGGGGAAATCCGGCAACAGCTGCCATCACGACCGTCGCCCCGTTG
CTTCTTTCTGCCACATTTCGTCGCAACGTGCCTTATGCGGTCCTCTTGAT
AGGCATGGATGTGTTCAGCGAAGCGACTGCATCCACGCCCTCCTCCACCA
CCTCTACTACTAGTTAAGGGAGAGTGAATCTCAAGTGTAAGTATATTTTC
CGCGAACACGAACACAAGAAGAAGGAAAATTTAAAGTCTCGAATCTCG back to topCoding sequence (CDS) from alignment at scaffold_5:519229..520476- >mRNA_2507 ID=mRNA_2507|Name=jgi.p|Nanoce1779_2|330797|organism=Nannochloropsis oceanica|type=CDS|length=1782bp|location=Sequence derived from alignment at scaffold_5:519229..520476- (Nannochloropsis oceanica)
ATTCTATTCCTCCTACCAAGGCATAAAATACATCAGTAAGGTTGCACGAG
ACGAGGATGATTGGGGAAATCCGGCAACAGCTGCCATCACGACCGTCGCC
CCGTTGCTTCTTTCTGCCACATTTCGTCGCAACGTGCCTTATGCGGTCCT
CTTGATAGGCATGGATGTGTTCAGCGAAGCGACTGCATCCACGCCCTCCT
CCACCACCTCTACTACTAGTTAATGGACGCGGTGCAGGGCATCAAGAAGG
GAGAGGCATTTGGTGTGATGCTCAACACGTTGCCCTCCAAGGCCAAGTTT
TCTGGCGAACACATAGGCAGTGCTGCCCTCGTATTTTCCATATGTCACAA
GTGCCATGGACCCGGATACGCGAATTCAAAGAGGAGCAGGAACGGAAGAA
GCGGCGGGAGTTTGAAGCAGCCTTGGGTCGGGCGCAACTCCAGGTGCCAG
GGCAACAGGACCAGCAGCAAAGCCAGGGACCAGCAACAGCACGAGCAAAA
TCTTTTCAAGAGCGCTTTAAGGAGTCGTATTTCAAAGAGCGACTGATGTT
TGGGGGAGTCGTGGGCGCCGTGACGGGCGCATTTTTTGGCGGACATTCTA
TTCCTCCTACCAAGGCATAAAATACATCAGTAAGGTTGCACGAGACGAGG
ATGATTGGGGAAATCCGGCAACAGCTGCCATCACGACCGTCGCCCCGTTG
CTTCTTTCTGCCACATTTCGTCGCAACGTGCCTTATGCGGTCCTCTTGAT
AGGCATGGATGTGTTCAGCGAAGCGACTGCATCCACGCCCTCCTCCACCA
CCTCTACTACTAGTTAATGGACGCGGTGCAGGGCATCAAGAAGGGAGAGG
CATTTGGTGTGATGCTCAACACGTTGCCCTCCAAGGCCAAGTTTTCTGGC
GAACACATAGGCAGTGCTGCCCTCGTATTTTCCATATGTCACAAGTGCCA
TGGACCCGGATACGCGAATTCAAAGAGGAGCAGGAACGGAAGAAGCGGCG
GGAGTTTGAAGCAGCCTTGGGTCGGGCGCAACTCCAGGTGCCAGGGCAAC
AGGACCAGCAGCAAAGCCAGGGACCAGCAACAGCACGAGCAAAATCTTTT
CAAGAGCGCTTTAAGGAGTCGTATTTCAAAGAGCGACTGATGTTTGGGGG
AGTCGTGGGCGCCGTGACGGGCGCATTTTTTGGCGGACATTCTATTCCTC
CTACCAAGGCATAAAATACATCAGTAAGGTTGCACGAGACGAGGATGATT
GGGGAAATCCGGCAACAGCTGCCATCACGACCGTCGCCCCGTTGCTTCTT
TCTGCCACATTTCGTCGCAACGTGCCTTATGCGGTCCTCTTGATAGGCAT
GGATGTGTTCAGCGAAGCGACTGCATCCACGCCCTCCTCCACCACCTCTA
CTACTAGTTAATGGACGCGGTGCAGGGCATCAAGAAGGGAGAGGCATTTG
GTGTGATGCTCAACACGTTGCCCTCCAAGGCCAAGTTTTCTGGCGAACAC
ATAGGCAGTGCTGCCCTCGTATTTTCCATATGTCACAAGTGCCATGGACC
CGGATACGCGAATTCAAAGAGGAGCAGGAACGGAAGAAGCGGCGGGAGTT
TGAAGCAGCCTTGGGTCGGGCGCAACTCCAGGTGCCAGGGCAACAGGACC
AGCAGCAAAGCCAGGGACCAGCAACAGCACGAGCAAAATCTTTTCAAGAG
CGCTTTAAGGAGTCGTATTTCAAAGAGCGACTGATGTTTGGGGGAGTCGT
GGGCGCCGTGACGGGCGCATTTTTTGGCGGAC back to top
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