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Properties
| Property Name | Value |
|---|
| TranscriptId | 657381 |
| Track | FilteredModels2 |
| ProteinId | 657295 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:76003..77490 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_25 ID=mRNA_25|Name=jgi.p|Nanoce1779_2|657295|organism=Nannochloropsis oceanica|type=mRNA|length=1056bp
AACCACCCTCTGTTGCTTTCCTCCATACACAGGAACCCCACATGTCCGTC
TCCTCCCCCACGCCCTACGTCCCCCTCTCCCGTCGGCCCGAATGGCACGA
CTTCACGCCCCTCTCTCAAAACGACCCTCCTGTCTCTTCCGTCGTTGTTC
CAATCGCCTACCCCGACGAATATCGTGATGCCACCGCCTACATGCGTGCT
GTCCTGGCGACGGGGGGAACGCTCTCGACGTGTTCAAGCCTTGGCTGGGG
AAGTGATCGAGATGAATGCCGCGCATTACACGGCCTGGTGGCTCCGACGA
CGTTGTTTGGAGTGTCTGGTGGCGGAAGCCCAGGCAGGGGGAAAGGGATG
GGAGAAGGGGGGGGACGAGGCTGTGGAAGCATTATATGATGAGGAGCTGG
CCTATGCCAGGCAGATGGCGGACGAGAACCCCAAGAACTATCAGGTATGG
TTCCATCGGCAAGCCATCGTAGCCCAGACACAAGACCCTTCACACGAGCT
CGAGGCGGACCCACGCAACAACAGCGCCTGGAACCAACGCTGGTTCATAG
TACATGCCCACGAGCTCTCCCCCCACCACCTTATGAGGGAGGGCGGGGAG
GAGGGAGGAAATACAGAAGCAACAGCAGTGGCAGCTGCAGCAGCGATCCG
TGATCGAGAGATGGCGTATGCCTGGACCGCTATCCGGGAGGAAGGAGGGA
GGGAGGGCGGGCGAGGGCTGGGGGAGAATGAAAGTGCATGGGCTTACCTT
AGGGGATACTTAAAAGAGACAAATTTTAAGGCGGTAGGTTGGAAGGAAAG
GCTTTTGGCGTTGGCTGAGGAAGGGAAGGAGGGAGGGAAGGAGGGAGGAA
GTGTGTGTGTGCCGTTGATGGCATTAGCGGTTGAGGTGCACGAGGCGGAG
GGCGACGACGCGAGTTTGGAGGAGGCGGTGGTATTGGTGGAAAGCCTAGG
AGAGCGGTGGGACAGGACGCGGCGGGGGTATTGGCTGAAGAGTGTGTTGG
GGAGGATCAATCGAAAGTTGCTGCGGGAGATCGGAACGCCGGTCGGGAGG
GGGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|657295 >mRNA_25-protein ID=mRNA_25-protein|Name=jgi.p|Nanoce1779_2|657295|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
NHPLLLSSIHRNPTCPSPPPRPTSPSPVGPNGTTSRPSLKTTLLSLPSLF
QSPTPTNIVMPPPTCVLSWRRGERSRRVQALAGEVIEMNAAHYTAWWLRR
RCLECLVAEAQAGGKGWEKGGDEAVEALYDEELAYARQMADENPKNYQVW
FHRQAIVAQTQDPSHELEADPRNNSAWNQRWFIVHAHELSPHHLMREGGE
EGGNTEATAVAAAAAIRDREMAYAWTAIREEGGREGGRGLGENESAWAYL
RGYLKETNFKAVGWKERLLALAEEGKEGGKEGGSVCVPLMALAVEVHEAE
GDDASLEEAVVLVESLGERWDRTRRGYWLKSVLGRINRKLLREIGTPVGR
G* back to topmRNA from alignment at scaffold_3:76003..77490- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_25 ID=mRNA_25|Name=jgi.p|Nanoce1779_2|657295|organism=Nannochloropsis oceanica|type=mRNA|length=1488bp|location=Sequence derived from alignment at scaffold_3:76003..77490- (Nannochloropsis oceanica)
AACCACCCTCTGTTGCTTTCCTCCATACACAGGAACCCCACATGTCCGTC
TCCTCCCCCACGCCCTACGTCCCCCTCTCCCGTCGGCCCGAATGGCACGA
CTTCACGCCCCTCTCTCAAAACGACCCTCCTGTCTCTTCCGTCGTTGTTC
CAATCGCCTACCCCGACGAATATCGTGATGCCACCGCCTACATGCGTGCT
GTCCTGGCGACGGGGGGAACGCTCTCGACGTGTTCAAGCCTTGGCTGGGG
AAGTGATCGAGATGAATGCCGCGCATTACACGGCCTGGTGGCTCCGACGA
CGTTGTTTGGAGTGTCTGGTGGCGGAAGCCCAGGCAGGGGGAAAGGGATG
GGAGAAGGGGGGGGACGAGGCTGTGGAAGCATTATATGATGAGGAGCTGG
CCTATGCCAGGCAGATGGCGGACGAGAACCCCAAGAACTATCAGGTGGGT
AGGTGGGTGGGTGGATGGATGATGGATTTCTGAGCCAGACTCACACTCCC
ATGGTTTACTCCTTGCTGAGTGTGTAAGAGGGACGGTCGGGCATAAATCA
CCTAAGCTCTTGCTTCTTTTCCTCCCTCTTTCCCTCCCTCCCCTTGGTCC
TAGGTATGGTTCCATCGGCAAGCCATCGTAGCCCAGACACAAGACCCTTC
ACACGAGCTCGAGGCGGTGGCACGTACTCTGAAGGGGGACGGGAAGAACT
ACCACGCCTGGGCCTACCGCCAGTGGTTGCTGCAGACGTTTCAAACGGGC
TGGGAGGCCGAGAAGCAATTCGTGGACGAGCTGCTCGAGGAGGACCCACG
GTAAGTGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGAGGA
GGGGAGAGAAAGAAGCAGAAAATCTGTCGGAGAAGGGATCTTCTATTCTA
TACAGCTTTTCTTTCTCCCTCCCTCCTTCCCTCCCTCCCTTCCCCAGCAA
CAACAGCGCCTGGAACCAACGCTGGTTCATAGTACATGCCCACGAGCTCT
CCCCCCACCACCTTATGAGGGAGGGCGGGGAGGAGGGAGGAAATACAGAA
GCAACAGCAGTGGCAGCTGCAGCAGCGATCCGTGATCGAGAGATGGCGTA
TGCCTGGACCGCTATCCGGGAGGAAGGAGGGAGGGAGGGCGGGCGAGGGC
TGGGGGAGAATGAAAGTGCATGGGCTTACCTTAGGGGATACTTAAAAGAG
ACAAATTTTAAGGCGGTAGGTTGGAAGGAAAGGCTTTTGGCGTTGGCTGA
GGAAGGGAAGGAGGGAGGGAAGGAGGGAGGAAGTGTGTGTGTGCCGTTGA
TGGCATTAGCGGTTGAGGTGCACGAGGCGGAGGGCGACGACGCGAGTTTG
GAGGAGGCGGTGGTATTGGTGGAAAGCCTAGGAGAGCGGTGGGACAGGAC
GCGGCGGGGGTATTGGCTGAAGAGTGTGTTGGGGAGGATCAATCGAAAGT
TGCTGCGGGAGATCGGAACGCCGGTCGGGAGGGGGTGA back to topCoding sequence (CDS) from alignment at scaffold_3:76003..77490- >mRNA_25 ID=mRNA_25|Name=jgi.p|Nanoce1779_2|657295|organism=Nannochloropsis oceanica|type=CDS|length=4224bp|location=Sequence derived from alignment at scaffold_3:76003..77490- (Nannochloropsis oceanica)
CAACAACAGCGCCTGGAACCAACGCTGGTTCATAGTACATGCCCACGAGC
TCTCCCCCCACCACCTTATGAGGGAGGGCGGGGAGGAGGGAGGAAATACA
GAAGCAACAGCAGTGGCAGCTGCAGCAGCGATCCGTGATCGAGAGATGGC
GTATGCCTGGACCGCTATCCGGGAGGAAGGAGGGAGGGAGGGCGGGCGAG
GGCTGGGGGAGAATGAAAGTGCATGGGCTTACCTTAGGGGATACTTAAAA
GAGACAAATTTTAAGGCGGTAGGTTGGAAGGAAAGGCTTTTGGCGTTGGC
TGAGGAAGGGAAGGAGGGAGGGAAGGAGGGAGGAAGTGTGTGTGTGCCGT
TGATGGCATTAGCGGTTGAGGTGCACGAGGCGGAGGGCGACGACGCGAGT
TTGGAGGAGGCGGTGGTATTGGTGGAAAGCCTAGGAGAGCGGTGGGACAG
GACGCGGCGGGGGTATTGGCTGAAGAGTGTGTTGGGGAGGATCAATCGAA
AGTTGCTGCGGGAGATCGGAACGCCGGTCGGGAGGGGGTGAGACCCACGG
TATGGTTCCATCGGCAAGCCATCGTAGCCCAGACACAAGACCCTTCACAC
GAGCTCGAGGCGAACCACCCTCTGTTGCTTTCCTCCATACACAGGAACCC
CACATGTCCGTCTCCTCCCCCACGCCCTACGTCCCCCTCTCCCGTCGGCC
CGAATGGCACGACTTCACGCCCCTCTCTCAAAACGACCCTCCTGTCTCTT
CCGTCGTTGTTCCAATCGCCTACCCCGACGAATATCGTGATGCCACCGCC
TACATGCGTGCTGTCCTGGCGACGGGGGGAACGCTCTCGACGTGTTCAAG
CCTTGGCTGGGGAAGTGATCGAGATGAATGCCGCGCATTACACGGCCTGG
TGGCTCCGACGACGTTGTTTGGAGTGTCTGGTGGCGGAAGCCCAGGCAGG
GGGAAAGGGATGGGAGAAGGGGGGGGACGAGGCTGTGGAAGCATTATATG
ATGAGGAGCTGGCCTATGCCAGGCAGATGGCGGACGAGAACCCCAAGAAC
TATCAGCAACAACAGCGCCTGGAACCAACGCTGGTTCATAGTACATGCCC
ACGAGCTCTCCCCCCACCACCTTATGAGGGAGGGCGGGGAGGAGGGAGGA
AATACAGAAGCAACAGCAGTGGCAGCTGCAGCAGCGATCCGTGATCGAGA
GATGGCGTATGCCTGGACCGCTATCCGGGAGGAAGGAGGGAGGGAGGGCG
GGCGAGGGCTGGGGGAGAATGAAAGTGCATGGGCTTACCTTAGGGGATAC
TTAAAAGAGACAAATTTTAAGGCGGTAGGTTGGAAGGAAAGGCTTTTGGC
GTTGGCTGAGGAAGGGAAGGAGGGAGGGAAGGAGGGAGGAAGTGTGTGTG
TGCCGTTGATGGCATTAGCGGTTGAGGTGCACGAGGCGGAGGGCGACGAC
GCGAGTTTGGAGGAGGCGGTGGTATTGGTGGAAAGCCTAGGAGAGCGGTG
GGACAGGACGCGGCGGGGGTATTGGCTGAAGAGTGTGTTGGGGAGGATCA
ATCGAAAGTTGCTGCGGGAGATCGGAACGCCGGTCGGGAGGGGGTGAGAC
CCACGGTATGGTTCCATCGGCAAGCCATCGTAGCCCAGACACAAGACCCT
TCACACGAGCTCGAGGCGAACCACCCTCTGTTGCTTTCCTCCATACACAG
GAACCCCACATGTCCGTCTCCTCCCCCACGCCCTACGTCCCCCTCTCCCG
TCGGCCCGAATGGCACGACTTCACGCCCCTCTCTCAAAACGACCCTCCTG
TCTCTTCCGTCGTTGTTCCAATCGCCTACCCCGACGAATATCGTGATGCC
ACCGCCTACATGCGTGCTGTCCTGGCGACGGGGGGAACGCTCTCGACGTG
TTCAAGCCTTGGCTGGGGAAGTGATCGAGATGAATGCCGCGCATTACACG
GCCTGGTGGCTCCGACGACGTTGTTTGGAGTGTCTGGTGGCGGAAGCCCA
GGCAGGGGGAAAGGGATGGGAGAAGGGGGGGGACGAGGCTGTGGAAGCAT
TATATGATGAGGAGCTGGCCTATGCCAGGCAGATGGCGGACGAGAACCCC
AAGAACTATCAGCAACAACAGCGCCTGGAACCAACGCTGGTTCATAGTAC
ATGCCCACGAGCTCTCCCCCCACCACCTTATGAGGGAGGGCGGGGAGGAG
GGAGGAAATACAGAAGCAACAGCAGTGGCAGCTGCAGCAGCGATCCGTGA
TCGAGAGATGGCGTATGCCTGGACCGCTATCCGGGAGGAAGGAGGGAGGG
AGGGCGGGCGAGGGCTGGGGGAGAATGAAAGTGCATGGGCTTACCTTAGG
GGATACTTAAAAGAGACAAATTTTAAGGCGGTAGGTTGGAAGGAAAGGCT
TTTGGCGTTGGCTGAGGAAGGGAAGGAGGGAGGGAAGGAGGGAGGAAGTG
TGTGTGTGCCGTTGATGGCATTAGCGGTTGAGGTGCACGAGGCGGAGGGC
GACGACGCGAGTTTGGAGGAGGCGGTGGTATTGGTGGAAAGCCTAGGAGA
GCGGTGGGACAGGACGCGGCGGGGGTATTGGCTGAAGAGTGTGTTGGGGA
GGATCAATCGAAAGTTGCTGCGGGAGATCGGAACGCCGGTCGGGAGGGGG
TGAGACCCACGGTATGGTTCCATCGGCAAGCCATCGTAGCCCAGACACAA
GACCCTTCACACGAGCTCGAGGCGAACCACCCTCTGTTGCTTTCCTCCAT
ACACAGGAACCCCACATGTCCGTCTCCTCCCCCACGCCCTACGTCCCCCT
CTCCCGTCGGCCCGAATGGCACGACTTCACGCCCCTCTCTCAAAACGACC
CTCCTGTCTCTTCCGTCGTTGTTCCAATCGCCTACCCCGACGAATATCGT
GATGCCACCGCCTACATGCGTGCTGTCCTGGCGACGGGGGGAACGCTCTC
GACGTGTTCAAGCCTTGGCTGGGGAAGTGATCGAGATGAATGCCGCGCAT
TACACGGCCTGGTGGCTCCGACGACGTTGTTTGGAGTGTCTGGTGGCGGA
AGCCCAGGCAGGGGGAAAGGGATGGGAGAAGGGGGGGGACGAGGCTGTGG
AAGCATTATATGATGAGGAGCTGGCCTATGCCAGGCAGATGGCGGACGAG
AACCCCAAGAACTATCAGCAACAACAGCGCCTGGAACCAACGCTGGTTCA
TAGTACATGCCCACGAGCTCTCCCCCCACCACCTTATGAGGGAGGGCGGG
GAGGAGGGAGGAAATACAGAAGCAACAGCAGTGGCAGCTGCAGCAGCGAT
CCGTGATCGAGAGATGGCGTATGCCTGGACCGCTATCCGGGAGGAAGGAG
GGAGGGAGGGCGGGCGAGGGCTGGGGGAGAATGAAAGTGCATGGGCTTAC
CTTAGGGGATACTTAAAAGAGACAAATTTTAAGGCGGTAGGTTGGAAGGA
AAGGCTTTTGGCGTTGGCTGAGGAAGGGAAGGAGGGAGGGAAGGAGGGAG
GAAGTGTGTGTGTGCCGTTGATGGCATTAGCGGTTGAGGTGCACGAGGCG
GAGGGCGACGACGCGAGTTTGGAGGAGGCGGTGGTATTGGTGGAAAGCCT
AGGAGAGCGGTGGGACAGGACGCGGCGGGGGTATTGGCTGAAGAGTGTGT
TGGGGAGGATCAATCGAAAGTTGCTGCGGGAGATCGGAACGCCGGTCGGG
AGGGGGTGAGACCCACGGTATGGTTCCATCGGCAAGCCATCGTAGCCCAG
ACACAAGACCCTTCACACGAGCTCGAGGCGAACCACCCTCTGTTGCTTTC
CTCCATACACAGGAACCCCACATGTCCGTCTCCTCCCCCACGCCCTACGT
CCCCCTCTCCCGTCGGCCCGAATGGCACGACTTCACGCCCCTCTCTCAAA
ACGACCCTCCTGTCTCTTCCGTCGTTGTTCCAATCGCCTACCCCGACGAA
TATCGTGATGCCACCGCCTACATGCGTGCTGTCCTGGCGACGGGGGGAAC
GCTCTCGACGTGTTCAAGCCTTGGCTGGGGAAGTGATCGAGATGAATGCC
GCGCATTACACGGCCTGGTGGCTCCGACGACGTTGTTTGGAGTGTCTGGT
GGCGGAAGCCCAGGCAGGGGGAAAGGGATGGGAGAAGGGGGGGGACGAGG
CTGTGGAAGCATTATATGATGAGGAGCTGGCCTATGCCAGGCAGATGGCG
GACGAGAACCCCAAGAACTATCAG back to top
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