Properties
| Property Name | Value |
|---|
| TranscriptId | 669159 |
| Track | FilteredModels2 |
| ProteinId | 669073 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:431854..434989 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2474 ID=mRNA_2474|Name=jgi.p|Nanoce1779_2|669073|organism=Nannochloropsis oceanica|type=mRNA|length=2948bp
GCTTCCTATATGTTTAGGCGATTTTTCGATGGATAGTATTATAAGCCCTA
CACATTCACCCCGTTTGACGACTTATATATGTATATATATATATGATTTA
CAGAAGCATACAGGAGCATGACCAGTACCGCCGTAGTCGCCAGCCTGGGT
CGACGTCTGCTCGGGAGGGGCGTGCCAAAACAGCCACGACGCGCACTGCG
AGCTGCTGCGGAAGGGGAGGCTTGCAGCGGGGCTGGCGCGCCATTAAGCA
CAAGCACCACCACAGCCACATCTCGGGAAGCACGACGTAAGAAGTGGCTG
AAGGAAAAGGCAGCCCCTGGAGAAGGTTCGGCAGCGGGGGCTGCGTCGGC
CAAGACGGCCGGCGTATCACAAGCCACTGCTGCACAAGCATCCTCATCCA
CGACCGCAGCCCTTTCCCCCGCCCCTAGCAACCCTGCCTCCACTGCCCTT
AAACTCATCGGTGGGAGCGTAGCAGCAGGCGGGGCATATCTTTTCTATCA
AACTTCCACCACCGATCAAAGTATTGATGATGTCCTTCGTGCCTCCCCCG
TCGGCTTCCCCTACGCGTGGCTCTACGACTCCGTCTTCTCCCCCTTCATT
AATCCCTCCCGAGAAAAACTTCTCCCCGACTGGCACTCCATCCCCAACAT
CCCTCCTGATGCCCCCTGCCCTCCCACCCTCGTGCTCGACCTCGAAGACA
CCCTCGTCCACGCTACCTGGGACCCTAAATTCGGCTGGCGTTACGCCAAA
CGGCCAGGGGTCGATCGCTTCCTCCAAGATCTGAGCAAATACTATGAAAT
CGTCCTCTTCTCCCCATCCAATTTCGGGGTCGTCGATCCCATCACCTGGA
CGCTGGACAAGCAAGGGCTGATCATGCACCGTCTCTACAAGGACTCTACG
CGGTTCTACCAGGGCAAACACATCAAGGATCTCTCAAAGCTTAACCGCGA
CCTTCGAAAAGTCGTCATCATCGACGACGACCCCGACGCATTCCGATTCC
AACCGCAGAATGGCATCCGTATCAAGCCCTTCAAAGACCCCAAGGATAAA
GCAGACTCCTCCCTGGACAAGCTCCGCGCTTTCCTCCTCGCCTTGGTCAT
GGAAGGGGTCGCCGATGACATCCCGGGCGTGCTCAGACAGTTCCAAGGCC
TTGATGCCGATCAGATTGGCGACGCGTACAAGTCCATGCTCCGGCAAGCC
CAGATCAAGGAAATGGAAAGGCACCAAAAGGGGTTGGGAGGGCTCTTGCG
TTCGCAAAAAGCTTTTCAAAGCATCGGCCACCCCCTCTCTACCCCAGCAG
CAGCAGCAGCAGCACCTGCCCGACTGTCGGCCAAGGATATCGTGGGTCAG
TACGAGGGAGGGACAGAGGGAGGAAAGCCAGCAGGAGCAGCTGCAGCGAT
GGTAGTACCGGACGAAATTAAGCAAAGCGCCCCCCCCCCGCCGGGGTCGG
TGAAGAAGGGCAAGATCTGGGCGTGGTATCAGGACTATATGAAAGAGGCG
GAGGAGGACCAGAGGAGGAAATTGGAATTGTGGAGCAAGAAACAGCAGCA
GAGGGAGGAAGAGGCGAGGAGACGGGCAATGGCTGCGCAGGCGGCCGGGG
GTGTGTGAGATTCAGGGAAATTTGGAGGCAGGGAGAAAGGGAGAGAGCGA
GGAAAAGGGAGGGGGAGATAGGTATTGAAGGGGAAGTGAAGCGTTGAGGG
AAGGAAATTTAAAAGGAAAAATAAAATGAAGTCGAATCGGTGATTTGCAA
GTTTCTCATGATGTCTTCTTTTCTGAATATAGCTTTGCAGCGAAGTGTTT
TCGATTTTTGTGGAAGCAAACCGTTGAGGACCGTTGAGGAGGAAATGGAC
ATGAGAGTGGAAGGACAAAAGAAAAGTCTCGCTCTCTCAAAAGATCTGTT
CGTCTGGCTTACGGCCACTCTGATCGTTTTTTCGTCCTTCTTTCTTTTTT
CTTTACATAACTCAGGTGCCGGGTGTGCAGGCCACTACCTCCAATGCCTC
TAGATTTCATCTTATCGTTTGACAACCGGTGTCCCTGACCCTCATGTATC
CGCCCCCTGCCACCACCAGGCTTCCAACATCGACACCATCAAGGGAGGGG
TTAGAGAATAGAAGAAGATAAAACTTCAGCTTCCCCATCCACGTCGCTCT
TCCGCGTTTCACGCTTCTTGATTTACTTGGTGAAACCCTGCAAGCACACA
GGAAAAGAAAACGAGGATGTGAGAATCAAGAGGAAATGAGGAAGGAAATA
TGGGGTACATCCAGCCACATCCCCCGTTACACGTACCTGCTTCTTGTTCT
GGAACTTCCACGATGCAATGATAAGTCCGGCACCTACTGTCACGCCGCCG
CCCACAAGGGCACCGACAAAGACTTTGTTGAACGGGGCCTCAAAGACGAG
GTGGGGGTGGTGTCCGCCGTCGCCGCCCATCATGCGTCTGTGTGAGGTTT
CAGTGAAATGCAGAGGAAGGAAATGGTGTAAGCGTGAACTGGCATGCGGT
AGCAGACCATGAAAACACAGCTTCTTATGTTGGACATGCAAGTGACCTGA
GCCGCGGAGCTGCTCTTGTGTACGCATGCTCTGGCCGTCATCCCCTCTCT
CCTCCTCCCCACTCCCTCCGTCCCCACAAACCATCTTACCGGGCGACGAG
CTGCGCCTGGTTCTTGGCAGGGGCCACGCGGGTAAGTCCACGAGCGACAC
CAAACATGGCTACGAATATGGGGTGCTGTGCGTTGTTGTGAAGAGGAGGG
CGTGGCTAGAATGTAAGTTTCTCTTAGGAGACAGGTAGGTTCCTTTGTCC
GACTTTGCTTGATGCGGGATTTGCAAGGTTGACCACTCGGATTCGCTGGG
GCTGACCATCCACATACAGAGGAAAGAAGGTAACAGAGGGAATGGATGGG
GTCCCGCGTTTCCGCACAAACTGGGCACGGGCGGCTGACGAGACGAGC back to topprotein sequence of jgi.p|Nanoce1779_2|669073 >mRNA_2474-protein ID=mRNA_2474-protein|Name=jgi.p|Nanoce1779_2|669073|organism=Nannochloropsis oceanica|type=polypeptide|length=497bp
MTSTAVVASLGRRLLGRGVPKQPRRALRAAAEGEACSGAGAPLSTSTTTA
TSREARRKKWLKEKAAPGEGSAAGAASAKTAGVSQATAAQASSSTTAALS
PAPSNPASTALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYA
WLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHAT
WDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQG
LIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGI
RIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDADQI
GDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLSTPAAAAAAP
ARLSAKDIVGQYEGGTEGGKPAGAAAAMVVPDEIKQSAPPPPGSVKKGKI
WAWYQDYMKEAEEDQRRKLELWSKKQQQREEEARRRAMAAQAAGGV* back to topmRNA from alignment at scaffold_5:431854..434989+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2474 ID=mRNA_2474|Name=jgi.p|Nanoce1779_2|669073|organism=Nannochloropsis oceanica|type=mRNA|length=3136bp|location=Sequence derived from alignment at scaffold_5:431854..434989+ (Nannochloropsis oceanica)
GCTTCCTATATGTTTAGGCGATTTTTCGATGGATAGTATTATAAGCCCTA
CACATTCACCCCGTTTGACGACTTATATATGTATATATATATATGATTTA
CAGAAGCATACAGGAGCATGACCAGTACCGCCGTAGTCGCCAGCCTGGGT
CGACGTCTGCTCGGGAGGGGCGTGCCAAAACAGCCACGACGCGCACTGCG
AGCTGCTGCGGAAGGGGAGGCTTGCAGCGGGGCTGGCGCGCCATTAAGCA
CAAGCACCACCACAGCCACATCTCGGGAAGCACGACGTAAGAAGTGGCTG
AAGGAAAAGGCAGCCCCTGGAGAAGGTTCGGCAGCGGGGGCTGCGTCGGC
CAAGGTACGTTGCGTACGGGCTAAGGGTGGTGAGGTGGTGAAGGACACCT
TGGAGGGGAGGACCTTAGAGGGAGCCAAGATGGAAAACATCATACGCACG
CAGCACGATTGCAATTGATTGTTTTCTTGTTGCCCCTATACTACTAAAAT
CTTTGATACTCATCATCTCCACCCCTCATCCTCATCCACCAGACGGCCGG
CGTATCACAAGCCACTGCTGCACAAGCATCCTCATCCACGACCGCAGCCC
TTTCCCCCGCCCCTAGCAACCCTGCCTCCACTGCCCTTAAACTCATCGGT
GGGAGCGTAGCAGCAGGCGGGGCATATCTTTTCTATCAAACTTCCACCAC
CGATCAAAGTATTGATGATGTCCTTCGTGCCTCCCCCGTCGGCTTCCCCT
ACGCGTGGCTCTACGACTCCGTCTTCTCCCCCTTCATTAATCCCTCCCGA
GAAAAACTTCTCCCCGACTGGCACTCCATCCCCAACATCCCTCCTGATGC
CCCCTGCCCTCCCACCCTCGTGCTCGACCTCGAAGACACCCTCGTCCACG
CTACCTGGGACCCTAAATTCGGCTGGCGTTACGCCAAACGGCCAGGGGTC
GATCGCTTCCTCCAAGATCTGAGCAAATACTATGAAATCGTCCTCTTCTC
CCCATCCAATTTCGGGGTCGTCGATCCCATCACCTGGACGCTGGACAAGC
AAGGGCTGATCATGCACCGTCTCTACAAGGACTCTACGCGGTTCTACCAG
GGCAAACACATCAAGGATCTCTCAAAGCTTAACCGCGACCTTCGAAAAGT
CGTCATCATCGACGACGACCCCGACGCATTCCGATTCCAACCGCAGAATG
GCATCCGTATCAAGCCCTTCAAAGACCCCAAGGATAAAGCAGACTCCTCC
CTGGACAAGCTCCGCGCTTTCCTCCTCGCCTTGGTCATGGAAGGGGTCGC
CGATGACATCCCGGGCGTGCTCAGACAGTTCCAAGGCCTTGATGCCGATC
AGATTGGCGACGCGTACAAGTCCATGCTCCGGCAAGCCCAGATCAAGGAA
ATGGAAAGGCACCAAAAGGGGTTGGGAGGGCTCTTGCGTTCGCAAAAAGC
TTTTCAAAGCATCGGCCACCCCCTCTCTACCCCAGCAGCAGCAGCAGCAG
CACCTGCCCGACTGTCGGCCAAGGATATCGTGGGTCAGTACGAGGGAGGG
ACAGAGGGAGGAAAGCCAGCAGGAGCAGCTGCAGCGATGGTAGTACCGGA
CGAAATTAAGCAAAGCGCCCCCCCCCCGCCGGGGTCGGTGAAGAAGGGCA
AGATCTGGGCGTGGTATCAGGACTATATGAAAGAGGCGGAGGAGGACCAG
AGGAGGAAATTGGAATTGTGGAGCAAGAAACAGCAGCAGAGGGAGGAAGA
GGCGAGGAGACGGGCAATGGCTGCGCAGGCGGCCGGGGGTGTGTGAGATT
CAGGGAAATTTGGAGGCAGGGAGAAAGGGAGAGAGCGAGGAAAAGGGAGG
GGGAGATAGGTATTGAAGGGGAAGTGAAGCGTTGAGGGAAGGAAATTTAA
AAGGAAAAATAAAATGAAGTCGAATCGGTGATTTGCAAGTTTCTCATGAT
GTCTTCTTTTCTGAATATAGCTTTGCAGCGAAGTGTTTTCGATTTTTGTG
GAAGCAAACCGTTGAGGACCGTTGAGGAGGAAATGGACATGAGAGTGGAA
GGACAAAAGAAAAGTCTCGCTCTCTCAAAAGATCTGTTCGTCTGGCTTAC
GGCCACTCTGATCGTTTTTTCGTCCTTCTTTCTTTTTTCTTTACATAACT
CAGGTGCCGGGTGTGCAGGCCACTACCTCCAATGCCTCTAGATTTCATCT
TATCGTTTGACAACCGGTGTCCCTGACCCTCATGTATCCGCCCCCTGCCA
CCACCAGGCTTCCAACATCGACACCATCAAGGGAGGGGTTAGAGAATAGA
AGAAGATAAAACTTCAGCTTCCCCATCCACGTCGCTCTTCCGCGTTTCAC
GCTTCTTGATTTACTTGGTGAAACCCTGCAAGCACACAGGAAAAGAAAAC
GAGGATGTGAGAATCAAGAGGAAATGAGGAAGGAAATATGGGGTACATCC
AGCCACATCCCCCGTTACACGTACCTGCTTCTTGTTCTGGAACTTCCACG
ATGCAATGATAAGTCCGGCACCTACTGTCACGCCGCCGCCCACAAGGGCA
CCGACAAAGACTTTGTTGAACGGGGCCTCAAAGACGAGGTGGGGGTGGTG
TCCGCCGTCGCCGCCCATCATGCGTCTGTGTGAGGTTTCAGTGAAATGCA
GAGGAAGGAAATGGTGTAAGCGTGAACTGGCATGCGGTAGCAGACCATGA
AAACACAGCTTCTTATGTTGGACATGCAAGTGACCTGAGCCGCGGAGCTG
CTCTTGTGTACGCATGCTCTGGCCGTCATCCCCTCTCTCCTCCTCCCCAC
TCCCTCCGTCCCCACAAACCATCTTACCGGGCGACGAGCTGCGCCTGGTT
CTTGGCAGGGGCCACGCGGGTAAGTCCACGAGCGACACCAAACATGGCTA
CGAATATGGGGTGCTGTGCGTTGTTGTGAAGAGGAGGGCGTGGCTAGAAT
GTAAGTTTCTCTTAGGAGACAGGTAGGTTCCTTTGTCCGACTTTGCTTGA
TGCGGGATTTGCAAGGTTGACCACTCGGATTCGCTGGGGCTGACCATCCA
CATACAGAGGAAAGAAGGTAACAGAGGGAATGGATGGGGTCCCGCGTTTC
CGCACAAACTGGGCACGGGCGGCTGACGAGACGAGC back to topCoding sequence (CDS) from alignment at scaffold_5:431854..434989+ >mRNA_2474 ID=mRNA_2474|Name=jgi.p|Nanoce1779_2|669073|organism=Nannochloropsis oceanica|type=CDS|length=2982bp|location=Sequence derived from alignment at scaffold_5:431854..434989+ (Nannochloropsis oceanica)
ATGACCAGTACCGCCGTAGTCGCCAGCCTGGGTCGACGTCTGCTCGGGAG
GGGCGTGCCAAAACAGCCACGACGCGCACTGCGAGCTGCTGCGGAAGGGG
AGGCTTGCAGCGGGGCTGGCGCGCCATTAAGCACAAGCACCACCACAGCC
ACATCTCGGGAAGCACGACGTAAGAAGTGGCTGAAGGAAAAGGCAGCCCC
TGGAGAAGGTTCGGCAGCGGGGGCTGCGTCGGCCAAGACGGCCGGCGTAT
CACAAGCCACTGCTGCACAAGCATCCTCATCCACGACCGCAGCCCTTTCC
CCCGCCCCTAGCAACCCTGCCTCCACTGCCCTTAAACTCATCGGTGGGAG
CGTAGCAGCAGGCGGGGCATATCTTTTCTATCAAACTTCCACCACCGATC
AAAGTATTGATGATGTCCTTCGTGCCTCCCCCGTCGGCTTCCCCTACGCG
TGGCTCTACGACTCCGTCTTCTCCCCCTTCATTAATCCCTCCCGAGAAAA
ACTTCTCCCCGACTGGCACTCCATCCCCAACATCCCTCCTGATGCCCCCT
GCCCTCCCACCCTCGTGCTCGACCTCGAAGACACCCTCGTCCACGCTACC
TGGGACCCTAAATTCGGCTGGCGTTACGCCAAACGGCCAGGGGTCGATCG
CTTCCTCCAAGATCTGAGCAAATACTATGAAATCGTCCTCTTCTCCCCAT
CCAATTTCGGGGTCGTCGATCCCATCACCTGGACGCTGGACAAGCAAGGG
CTGATCATGCACCGTCTCTACAAGGACTCTACGCGGTTCTACCAGGGCAA
ACACATCAAGGATCTCTCAAAGCTTAACCGCGACCTTCGAAAAGTCGTCA
TCATCGACGACGACCCCGACGCATTCCGATTCCAACCGCAGAATGGCATC
CGTATCAAGCCCTTCAAAGACCCCAAGGATAAAGCAGACTCCTCCCTGGA
CAAGCTCCGCGCTTTCCTCCTCGCCTTGGTCATGGAAGGGGTCGCCGATG
ACATCCCGGGCGTGCTCAGACAGTTCCAAGGCCTTGATGCCGATCAGATT
GGCGACGCGTACAAGTCCATGCTCCGGCAAGCCCAGATCAAGGAAATGGA
AAGGCACCAAAAGGGGTTGGGAGGGCTCTTGCGTTCGCAAAAAGCTTTTC
AAAGCATCGGCCACCCCCTCTCTACCCCAGCAGCAGCAGCAGCAGCACCT
GCCCGACTGTCGGCCAAGGATATCGTGGGTCAGTACGAGGGAGGGACAGA
GGGAGGAAAGCCAGCAGGAGCAGCTGCAGCGATGGTAGTACCGGACGAAA
TTAAGCAAAGCGCCCCCCCCCCGCCGGGGTCGGTGAAGAAGGGCAAGATC
TGGGCGTGGTATCAGGACTATATGAAAGAGGCGGAGGAGGACCAGAGGAG
GAAATTGGAATTGTGGAGCAAGAAACAGCAGCAGAGGGAGGAAGAGGCGA
GGAGACGGGCAATGGCTGCGCAGGCGGCCGGGGGTGTGTGAATGACCAGT
ACCGCCGTAGTCGCCAGCCTGGGTCGACGTCTGCTCGGGAGGGGCGTGCC
AAAACAGCCACGACGCGCACTGCGAGCTGCTGCGGAAGGGGAGGCTTGCA
GCGGGGCTGGCGCGCCATTAAGCACAAGCACCACCACAGCCACATCTCGG
GAAGCACGACGTAAGAAGTGGCTGAAGGAAAAGGCAGCCCCTGGAGAAGG
TTCGGCAGCGGGGGCTGCGTCGGCCAAGACGGCCGGCGTATCACAAGCCA
CTGCTGCACAAGCATCCTCATCCACGACCGCAGCCCTTTCCCCCGCCCCT
AGCAACCCTGCCTCCACTGCCCTTAAACTCATCGGTGGGAGCGTAGCAGC
AGGCGGGGCATATCTTTTCTATCAAACTTCCACCACCGATCAAAGTATTG
ATGATGTCCTTCGTGCCTCCCCCGTCGGCTTCCCCTACGCGTGGCTCTAC
GACTCCGTCTTCTCCCCCTTCATTAATCCCTCCCGAGAAAAACTTCTCCC
CGACTGGCACTCCATCCCCAACATCCCTCCTGATGCCCCCTGCCCTCCCA
CCCTCGTGCTCGACCTCGAAGACACCCTCGTCCACGCTACCTGGGACCCT
AAATTCGGCTGGCGTTACGCCAAACGGCCAGGGGTCGATCGCTTCCTCCA
AGATCTGAGCAAATACTATGAAATCGTCCTCTTCTCCCCATCCAATTTCG
GGGTCGTCGATCCCATCACCTGGACGCTGGACAAGCAAGGGCTGATCATG
CACCGTCTCTACAAGGACTCTACGCGGTTCTACCAGGGCAAACACATCAA
GGATCTCTCAAAGCTTAACCGCGACCTTCGAAAAGTCGTCATCATCGACG
ACGACCCCGACGCATTCCGATTCCAACCGCAGAATGGCATCCGTATCAAG
CCCTTCAAAGACCCCAAGGATAAAGCAGACTCCTCCCTGGACAAGCTCCG
CGCTTTCCTCCTCGCCTTGGTCATGGAAGGGGTCGCCGATGACATCCCGG
GCGTGCTCAGACAGTTCCAAGGCCTTGATGCCGATCAGATTGGCGACGCG
TACAAGTCCATGCTCCGGCAAGCCCAGATCAAGGAAATGGAAAGGCACCA
AAAGGGGTTGGGAGGGCTCTTGCGTTCGCAAAAAGCTTTTCAAAGCATCG
GCCACCCCCTCTCTACCCCAGCAGCAGCAGCAGCAGCACCTGCCCGACTG
TCGGCCAAGGATATCGTGGGTCAGTACGAGGGAGGGACAGAGGGAGGAAA
GCCAGCAGGAGCAGCTGCAGCGATGGTAGTACCGGACGAAATTAAGCAAA
GCGCCCCCCCCCCGCCGGGGTCGGTGAAGAAGGGCAAGATCTGGGCGTGG
TATCAGGACTATATGAAAGAGGCGGAGGAGGACCAGAGGAGGAAATTGGA
ATTGTGGAGCAAGAAACAGCAGCAGAGGGAGGAAGAGGCGAGGAGACGGG
CAATGGCTGCGCAGGCGGCCGGGGGTGTGTGA back to top
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