Properties
| Property Name | Value |
|---|
| TranscriptId | 329811 |
| Track | FilteredModels2 |
| ProteinId | 329725 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:400978..402312 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2461 ID=mRNA_2461|Name=jgi.p|Nanoce1779_2|329725|organism=Nannochloropsis oceanica|type=mRNA|length=1296bp
GGGAGGCTGAGAGACTTCTACATTGTATGAGTGAGTGTAATCCAGGGAGC
TTGGACAAAAGCGCCGTCCCGGCTGCTACCACTGCGCACACGCGACGTGA
TTCTATGCGGCAGTGTCTGGGCCAGAGCGAGTGGACTGGTGTGCAAGGGC
ACTAGTTAGTACTGCAGTGCACTAACTGCGTTATGATGGAAGAGCGACCT
TCAGTCGCAGCTCTGGAGTCGCCAACTACAAACGGCCTCAATGTGTTCTG
TATTCCTTTAAATGGGCGCAAGCAAGCTTTTGTGCTGAACACCATCCTGC
CTGAGGTCATAGAGACGTGGGCGAACGCGCCAGCACACTCTATCTGTCGC
TGACCTTCCCCCACACCTCAAGGACAGGAGCCCGATCCTGCGCTAAGAAA
ACAATGCGTTGGCCGACTTCCGAACAACGCAATACCGGCGGACGCTTGGC
ACTCGAGATCGTGACCCTTACGAGCTCCGCACTCTTTGCAGGAGCCGCGC
TTTACATCTCTTTGGTGGCACACCCCGCACGCTGCGCCCTCGCCTCGGCT
CTTAAGAATACCCTGGAGGCCAAGAAGAGTGACATCAAAGCTGCGCTCTT
CGAATGGAACGACTCTTACCAACGTGCCGCCCCTCTCCAGATCTTTTATG
CTGTTGTCGCGGGTGTGGGCGGGCTGTGCAATACCTTCGTGCTGGGAAAG
GGGGAGGCTTGGGCGTGGGGAGGGGGTTTGATGCTGGCGAACGTGCCATT
TACCCTCCTCTGCATGGTGCCTGTGAACAATGAGCTCAAAGCGCGTGCCA
GGGCAGCAGCAGACATGAACAAGACGGCGCTGATGGCTCATCGCACGGCA
GGCATGGAGGAGCCCCCAGAGCTGCAACGGACGACAACATGCTTTCGTTC
CTGGTCCCTAACCGGAGGTTCCTTCACGCAAGATCTACTAGAAGTATGGG
GAAACTTGCATATGGTGCGCACCTGGCTCGGCCTGAGTGGTTTCCTTGTC
TTGGTTTCCCAACTCGTGGCCACTGCTCACAGCCGCAAGCGCAACGGCTT
GATGTAAGTGAAGAAAAGGAAAGCAATATATAGGGAGTCAGGTGAAAGAC
AAGAGTTTAAAAAGTATTATGACGTCGTTTTTACTGCGAAAGCTGCGGGT
GTACATAATTCTCGCTTAAGTAGAGAGAGCAGTCTGAAGGACAGAAAAGA
AGGAAATCAGAGAGAGAAACCTGCATCTTCCTGGAATGATATGTCCCAAT
CAATGGATCCCAAGAAAGAAGGAAATAAATTACGCCACATTCAACC back to topprotein sequence of jgi.p|Nanoce1779_2|329725 >mRNA_2461-protein ID=mRNA_2461-protein|Name=jgi.p|Nanoce1779_2|329725|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp
MRWPTSEQRNTGGRLALEIVTLTSSALFAGAALYISLVAHPARCALASAL
KNTLEAKKSDIKAALFEWNDSYQRAAPLQIFYAVVAGVGGLCNTFVLGKG
EAWAWGGGLMLANVPFTLLCMVPVNNELKARARAAADMNKTALMAHRTAG
MEEPPELQRTTTCFRSWSLTGGSFTQDLLEVWGNLHMVRTWLGLSGFLVL
VSQLVATAHSRKRNGLM* back to topmRNA from alignment at scaffold_5:400978..402312+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2461 ID=mRNA_2461|Name=jgi.p|Nanoce1779_2|329725|organism=Nannochloropsis oceanica|type=mRNA|length=1335bp|location=Sequence derived from alignment at scaffold_5:400978..402312+ (Nannochloropsis oceanica)
GGGAGGCTGAGAGACTTCTACATTGTATGAGTGAGTGTAATCCAGGGAGC
TTGGACAAAAGCGCCGTCCCGGCTGCTACCACTGCGCACACGCGACGTGA
TTCTATGCGGCAGTGTCTGGGCCAGAGCGAGTGGACTGGTGTGCAAGGGC
ACTAGTTAGTACTGCAGTGCACTAACTGCGTTATGATGGAAGAGCGACCT
TCAGTCGCAGCTCTGGAGTCGCCAACTACAAACGGCCTCAATGTGTTCTG
TATTCCTTTAAATGGGCGCAAGCAAGCTTTTGTGCTGAACACCATCCTGC
CTGAGGTCATAGAGACGTGGGCGAACGCGCCAGCACACTCTATCTGTCGC
TGACCTTCCCCCACACCTCAAGGACAGGAGCCCGATCCTGCGCTAAGAAA
ACAATGCGTTGGCCGACTTCCGAACAACGCAATACCGGCGGACGCTTGGC
ACTCGAGATCGTGACCCTTACGAGCTCCGCACTCTTTGCAGGAGCCGCGC
TTTACATCTCTTTGGTGGCACACCCCGCACGCTGCGCCCTCGCCTCGGCT
CTTAAGAATACCCTGGAGGCCAAGAAGAGTGACATCAAAGCTGCGCTCTT
CGAATGGAACGACTCTTACCAACGTGCCGCCCCTCTCCAGATCTTTTATG
CTGTTGTCGCGGGTGTGGGCGGGCTGTGCAATACCTTCGTGCTGGGAAAG
GGGGAGGCTTGGGCGTGGGGAGGGGGTTTGATGCTGGCGAACGTGCCATT
TACCCTCCTCTGCATGGTGCCTGTGAACAATGAGCTCAAAGCGCGTGCCA
GGGCAGCAGCAGACATGAACAAGACGGCGCTGATGGCTCATCGCACGGCA
GGCATGGAGGAGCCCGTGGTTGAAGAAGGAGAGGAGGAAGTGGGGAAAGG
GGAGCCAGAGCTGCAACGGACGACAACATGCTTTCGTTCCTGGTCCCTAA
CCGGAGGTTCCTTCACGCAAGATCTACTAGAAGTATGGGGAAACTTGCAT
ATGGTGCGCACCTGGCTCGGCCTGAGTGGTTTCCTTGTCTTGGTTTCCCA
ACTCGTGGCCACTGCTCACAGCCGCAAGCGCAACGGCTTGATGTAAGTGA
AGAAAAGGAAAGCAATATATAGGGAGTCAGGTGAAAGACAAGAGTTTAAA
AAGTATTATGACGTCGTTTTTACTGCGAAAGCTGCGGGTGTACATAATTC
TCGCTTAAGTAGAGAGAGCAGTCTGAAGGACAGAAAAGAAGGAAATCAGA
GAGAGAAACCTGCATCTTCCTGGAATGATATGTCCCAATCAATGGATCCC
AAGAAAGAAGGAAATAAATTACGCCACATTCAACC back to topCoding sequence (CDS) from alignment at scaffold_5:400978..402312+ >mRNA_2461 ID=mRNA_2461|Name=jgi.p|Nanoce1779_2|329725|organism=Nannochloropsis oceanica|type=CDS|length=1308bp|location=Sequence derived from alignment at scaffold_5:400978..402312+ (Nannochloropsis oceanica)
ATGCGTTGGCCGACTTCCGAACAACGCAATACCGGCGGACGCTTGGCACT
CGAGATCGTGACCCTTACGAGCTCCGCACTCTTTGCAGGAGCCGCGCTTT
ACATCTCTTTGGTGGCACACCCCGCACGCTGCGCCCTCGCCTCGGCTCTT
AAGAATACCCTGGAGGCCAAGAAGAGTGACATCAAAGCTGCGCTCTTCGA
ATGGAACGACTCTTACCAACGTGCCGCCCCTCTCCAGATCTTTTATGCTG
TTGTCGCGGGTGTGGGCGGGCTGTGCAATACCTTCGTGCTGGGAAAGGGG
GAGGCTTGGGCGTGGGGAGGGGGTTTGATGCTGGCGAACGTGCCATTTAC
CCTCCTCTGCATGGTGCCTGTGAACAATGAGCTCAAAGCGCGTGCCAGGG
CAGCAGCAGACATGAACAAGACGGCGCTGATGGCTCATCGCACGGCAGGC
ATGGAGGAGCCCCCAGAGCTGCAACGGACGACAACATGCTTTCGTTCCTG
GTCCCTAACCGGAGGTTCCTTCACGCAAGATCTACTAGAAGTATGGGGAA
ACTTGCATATGGTGCGCACCTGGCTCGGCCTGAGTGGTTTCCTTGTCTTG
GTTTCCCAACTCGTGGCCACTGCTCACAGCCGCAAGCGCAACGGCTTGAT
GTAAATGCGTTGGCCGACTTCCGAACAACGCAATACCGGCGGACGCTTGG
CACTCGAGATCGTGACCCTTACGAGCTCCGCACTCTTTGCAGGAGCCGCG
CTTTACATCTCTTTGGTGGCACACCCCGCACGCTGCGCCCTCGCCTCGGC
TCTTAAGAATACCCTGGAGGCCAAGAAGAGTGACATCAAAGCTGCGCTCT
TCGAATGGAACGACTCTTACCAACGTGCCGCCCCTCTCCAGATCTTTTAT
GCTGTTGTCGCGGGTGTGGGCGGGCTGTGCAATACCTTCGTGCTGGGAAA
GGGGGAGGCTTGGGCGTGGGGAGGGGGTTTGATGCTGGCGAACGTGCCAT
TTACCCTCCTCTGCATGGTGCCTGTGAACAATGAGCTCAAAGCGCGTGCC
AGGGCAGCAGCAGACATGAACAAGACGGCGCTGATGGCTCATCGCACGGC
AGGCATGGAGGAGCCCCCAGAGCTGCAACGGACGACAACATGCTTTCGTT
CCTGGTCCCTAACCGGAGGTTCCTTCACGCAAGATCTACTAGAAGTATGG
GGAAACTTGCATATGGTGCGCACCTGGCTCGGCCTGAGTGGTTTCCTTGT
CTTGGTTTCCCAACTCGTGGCCACTGCTCACAGCCGCAAGCGCAACGGCT
TGATGTAA back to top
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