Properties
| Property Name | Value |
|---|
| TranscriptId | 669127 |
| Track | FilteredModels2 |
| ProteinId | 669041 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:348454..350475 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2437 ID=mRNA_2437|Name=jgi.p|Nanoce1779_2|669041|organism=Nannochloropsis oceanica|type=mRNA|length=1823bp
AGTCATCTGAAAATAACTTAGTGTGGTTGTGTATACCATCATCGTCTGTG
GTCGTACGGAGTACTCTTCGTGTATTTGGTGGCCGCGTTTGTTAGGTGGG
GTGGGGAGGTAGCCAAATCTATGGACGGTATGCAGGCACGCGATGCCCAC
GCTCCGAAGCGCAACCCAACCTACACAATCCACAGGCTCTTTATCACAAC
TAGATGGGACGCAAGGACAAGGACAAGGCCAAGGAGGTCAAGAACAAGCA
GCAAATCTTTAACGACGACGACGATGGGGAGTCCGACGAAGGGGACGAGA
CTGGGAACGACAAGCTCCGCGTGAACAAGGCCTACGCCTCCCACTTTGAA
GCCACCAAGAAGAAGCAAGAGCTCGTACAGCTCGGCCGGTACCATCGCAA
TGGCAGCATCAACAGTAGCAGCAGGAAAAGGGGTGGATTGTCGGACTCCT
CTTCAGAGAGTGAAGGAGAGGAAGACTCGGACGCCTCTTCATCCGACGAA
GAAGACGAGGACGGGGAAGCGCTCACGCCGGCATTAGAGGTACAGATACT
GCAGACCATAAATAGCATTAGGGCCAAGGACCCCAAGATCTATAGGCAGG
ATGTCACGTGGTTTGCTGGTCAAGAAGAGGAGGAGGAGGAGGAGGAGGAA
GGGAGAGAGGAGGGGAATGTTAAGGAGGATAGACGCAAGACATACAAAGA
TGTGATTCGAGAGCAGGTGTTGGCAGCAGCGAAGGCAGGAAGGGATGAGA
TTGACTCGTCGTCGGACGAGGACAAGGAGGGAGGGAGGAAGGGAGGGAGA
GATGGAGGGGAGCCGGTGTCGAGTCGCAGGATGGCTTATGATGCTGAGCA
GTTGAAGTTGAGGAAAGCGTTTTTGGAGGCGGCGGTGGAGGTTGAAGAGG
GGGAAGAAGAGAAGGAAGGAGGGATGAAGAGGATGAAGAGGAAGAAGGGG
AGGAATGAACTGGAAGGGGAAGAGGGGGAAGAGGGAGAGGAGGGAGGGGA
GGAGGGACTTTTTGAGGGGTCGGGGCTGCTGACCATCAGGAAGCGTGGCG
CGAAAGAGTCTGCAATATTTGACAAACAGATACAAGAGGAAGTGGAAAAG
ATGGTGAGGGGTGCTGGGCAGGTGGGTGGGAGGGAGAGCCAGGAGGAGGA
GAAGGAGAGGGAGAAGGATTTGTTTTTAAGGGATTTTGTCTTGGGGAAGA
AATGGCGGGAGGAGGGGGAGGAGGAGGACGAGGAAGCGTCAGGGAGGGGA
AGAAGAGGAAGAGAAGGGCAACAGGAGGAGGTGGGGAATGTGGATGCGGG
GGAGGAGGGGCATTATGGCCCAGTGAGGGAGGGAGGGAGGGAGGGCGGGG
TGGATGGAGGGGTGGATGATGAGGAGGACGCGGAGGAGGTGGAGAAGATG
GAAATGTTTGAGAGTAAATATAATTTTCGGTTCGAGCAGGAAGGAGGGAC
CGCGCTTGTCTCATACGGTAGAACGGTTGAAGGTTCTGCGCGTCGGAAAG
ACGACAAGAGGAAAAAGGAGCGGGAAGCCTACAAGAAACGAAAAGAAGAG
GAACGGAAGAAGAAGGAGGAAGAACTAAGACGGCTCAAGAATTTGAAAAA
GGAAGAGATACGGGCGAGGCTGCGGAAGGTGGAAGAAGTGAGTGGGGGAG
GGAAGGTGGATGAAGGAATATTGGAGGAGGACTGGGATCCGGAGGCGTGG
GACCGTCAGATGGCGCAGGCGTTTGGGGAGGAGTATTACCACGAGGGGGA
GAAGGAGGAATGGAAGCCGGAAGGGGGGGGGGGAGGAGGAAGAAGAGGAG
GACGACGACGGGGAAGGGGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|669041 >mRNA_2437-protein ID=mRNA_2437-protein|Name=jgi.p|Nanoce1779_2|669041|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MGRKDKDKAKEVKNKQQIFNDDDDGESDEGDETGNDKLRVNKAYASHFEA
TKKKQELVQLGRYHRNGSINSSSRKRGGLSDSSSESEGEEDSDASSSDEE
DEDGEALTPALEVQILQTINSIRAKDPKIYRQDVTWFAGQEEEEEEEEEG
REEGNVKEDRRKTYKDVIREQVLAAAKAGRDEIDSSSDEDKEGGRKGGRD
GGEPVSSRRMAYDAEQLKLRKAFLEAAVEVEEGEEEKEGGMKRMKRKKGR
NELEGEEGEEGEEGGEEGLFEGSGLLTIRKRGAKESAIFDKQIQEEVEKM
VRGAGQVGGRESQEEEKEREKDLFLRDFVLGKKWREEGEEEDEEASGRGR
RGREGQQEEVGNVDAGEEGHYGPVREGGREGGVDGGVDDEEDAEEVEKME
MFESKYNFRFEQEGGTALVSYGRTVEGSARRKDDKRKKEREAYKKRKEEE
RKKKEEELRRLKNLKKEEIRARLRKVEEVSGGGKVDEGILEEDWDPEAWD
RQMAQAFGEEYYHEGEKEEWKPEGGGGGGRRGGRRRGRG* back to topmRNA from alignment at scaffold_5:348454..350475+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2437 ID=mRNA_2437|Name=jgi.p|Nanoce1779_2|669041|organism=Nannochloropsis oceanica|type=mRNA|length=2022bp|location=Sequence derived from alignment at scaffold_5:348454..350475+ (Nannochloropsis oceanica)
AGTCATCTGAAAATAACTTAGTGTGGTTGTGTATACCATCATCGTCTGTG
GTCGTACGGAGTACTCTTCGTGTATTTGGTGGCCGCGTTTGTTAGGTGGG
GTGGGGAGGTAGCCAAATCTATGGACGGTATGCAGGCACGCGATGCCCAC
GCTCCGAAGCGCAACCCAACCTACACAATCCACAGGCTCTTTATCACAAC
TAGATGGGACGCAAGGACAAGGACAAGGCCAAGGAGGTCAAGAACAAGCA
GCAAATCTTTAACGACGACGACGATGGGGAGTCCGACGAAGGGGACGAGA
CTGGGAACGACAAGGTGCGGGTGTGCGTGTGTAGGTGGATCGAGGCTAAG
ATGAGCACGGCAAGCGGATAGTGTTGTAGGGAAGTGAGAGAGTGACATTG
TGTGGCTGCAGGACGGTCCGGTGCGTCTAAAGTGTGAGAGAATGAATGCA
TCGATGCCCTCACTCCCCCTTAACACAACCCACCCATTCCTCATCTTCTC
TCACTTCATTCAGCTCCGCGTGAACAAGGCCTACGCCTCCCACTTTGAAG
CCACCAAGAAGAAGCAAGAGCTCGTACAGCTCGGCCGGTACCATCGCAAT
GGCAGCATCAACAGTAGCAGCAGGAAAAGGGGTGGATTGTCGGACTCCTC
TTCAGAGAGTGAAGGAGAGGAAGACTCGGACGCCTCTTCATCCGACGAAG
AAGACGAGGACGGGGAAGCGCTCACGCCGGCATTAGAGGTACAGATACTG
CAGACCATAAATAGCATTAGGGCCAAGGACCCCAAGATCTATAGGCAGGA
TGTCACGTGGTTTGCTGGTCAAGAAGAGGAGGAGGAGGAGGAGGAGGAAG
GGAGAGAGGAGGGGAATGTTAAGGAGGATAGACGCAAGACATACAAAGAT
GTGATTCGAGAGCAGGTGTTGGCAGCAGCGAAGGCAGGAAGGGATGAGAT
TGACTCGTCGTCGGACGAGGACAAGGAGGGAGGGAGGAAGGGAGGGAGAG
ATGGAGGGGAGCCGGTGTCGAGTCGCAGGATGGCTTATGATGCTGAGCAG
TTGAAGTTGAGGAAAGCGTTTTTGGAGGCGGCGGTGGAGGTTGAAGAGGG
GGAAGAAGAGAAGGAAGGAGGGATGAAGAGGATGAAGAGGAAGAAGGGGA
GGAATGAACTGGAAGGGGAAGAGGGGGAAGAGGGAGAGGAGGGAGGGGAG
GAGGGACTTTTTGAGGGGTCGGGGCTGCTGACCATCAGGAAGCGTGGCGC
GAAAGAGTCTGCAATATTTGACAAACAGATACAAGAGGAAGTGGAAAAGA
TGGTGAGGGGTGCTGGGCAGGTGGGTGGGAGGGAGAGCCAGGAGGAGGAG
AAGGAGAGGGAGAAGGATTTGTTTTTAAGGGATTTTGTCTTGGGGAAGAA
ATGGCGGGAGGAGGGGGAGGAGGAGGACGAGGAAGCGTCAGGGAGGGGAA
GAAGAGGAAGAGAAGGGCAACAGGAGGAGGTGGGGAATGTGGATGCGGGG
GAGGAGGGGCATTATGGCCCAGTGAGGGAGGGAGGGAGGGAGGGCGGGGT
GGATGGAGGGGTGGATGATGAGGAGGACGCGGAGGAGGTGGAGAAGATGG
AAATGTTTGAGAGTAAATATAATTTTCGGTTCGAGCAGGAAGGAGGGACC
GCGCTTGTCTCATACGGTAGAACGGTTGAAGGTTCTGCGCGTCGGAAAGA
CGACAAGAGGAAAAAGGAGCGGGAAGCCTACAAGAAACGAAAAGAAGAGG
AACGGAAGAAGAAGGAGGAAGAACTAAGACGGCTCAAGAATTTGAAAAAG
GAAGAGATACGGGCGAGGCTGCGGAAGGTGGAAGAAGTGAGTGGGGGAGG
GAAGGTGGATGAAGGAATATTGGAGGAGGACTGGGATCCGGAGGCGTGGG
ACCGTCAGATGGCGCAGGCGTTTGGGGAGGAGTATTACCACGAGGGGGAG
AAGGAGGAATGGAAGCCGGAAGGGGGGGGGGGAGGAGGAAGAAGAGGAGG
ACGACGACGGGGAAGGGGATGA back to topCoding sequence (CDS) from alignment at scaffold_5:348454..350475+ >mRNA_2437 ID=mRNA_2437|Name=jgi.p|Nanoce1779_2|669041|organism=Nannochloropsis oceanica|type=CDS|length=3240bp|location=Sequence derived from alignment at scaffold_5:348454..350475+ (Nannochloropsis oceanica)
ATGGGACGCAAGGACAAGGACAAGGCCAAGGAGGTCAAGAACAAGCAGCA
AATCTTTAACGACGACGACGATGGGGAGTCCGACGAAGGGGACGAGACTG
GGAACGACAAGCTCCGCGTGAACAAGGCCTACGCCTCCCACTTTGAAGCC
ACCAAGAAGAAGCAAGAGCTCGTACAGCTCGGCCGGTACCATCGCAATGG
CAGCATCAACAGTAGCAGCAGGAAAAGGGGTGGATTGTCGGACTCCTCTT
CAGAGAGTGAAGGAGAGGAAGACTCGGACGCCTCTTCATCCGACGAAGAA
GACGAGGACGGGGAAGCGCTCACGCCGGCATTAGAGGTACAGATACTGCA
GACCATAAATAGCATTAGGGCCAAGGACCCCAAGATCTATAGGCAGGATG
TCACGTGGTTTGCTGGTCAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGGG
AGAGAGGAGGGGAATGTTAAGGAGGATAGACGCAAGACATACAAAGATGT
GATTCGAGAGCAGGTGTTGGCAGCAGCGAAGGCAGGAAGGGATGAGATTG
ACTCGTCGTCGGACGAGGACAAGGAGGGAGGGAGGAAGGGAGGGAGAGAT
GGAGGGGAGCCGGTGTCGAGTCGCAGGATGGCTTATGATGCTGAGCAGTT
GAAGTTGAGGAAAGCGTTTTTGGAGGCGGCGGTGGAGGTTGAAGAGGGGG
AAGAAGAGAAGGAAGGAGGGATGAAGAGGATGAAGAGGAAGAAGGGGAGG
AATGAACTGGAAGGGGAAGAGGGGGAAGAGGGAGAGGAGGGAGGGGAGGA
GGGACTTTTTGAGGGGTCGGGGCTGCTGACCATCAGGAAGCGTGGCGCGA
AAGAGTCTGCAATATTTGACAAACAGATACAAGAGGAAGTGGAAAAGATG
GTGAGGGGTGCTGGGCAGGTGGGTGGGAGGGAGAGCCAGGAGGAGGAGAA
GGAGAGGGAGAAGGATTTGTTTTTAAGGGATTTTGTCTTGGGGAAGAAAT
GGCGGGAGGAGGGGGAGGAGGAGGACGAGGAAGCGTCAGGGAGGGGAAGA
AGAGGAAGAGAAGGGCAACAGGAGGAGGTGGGGAATGTGGATGCGGGGGA
GGAGGGGCATTATGGCCCAGTGAGGGAGGGAGGGAGGGAGGGCGGGGTGG
ATGGAGGGGTGGATGATGAGGAGGACGCGGAGGAGGTGGAGAAGATGGAA
ATGTTTGAGAGTAAATATAATTTTCGGTTCGAGCAGGAAGGAGGGACCGC
GCTTGTCTCATACGGTAGAACGGTTGAAGGTTCTGCGCGTCGGAAAGACG
ACAAGAGGAAAAAGGAGCGGGAAGCCTACAAGAAACGAAAAGAAGAGGAA
CGGAAGAAGAAGGAGGAAGAACTAAGACGGCTCAAGAATTTGAAAAAGGA
AGAGATACGGGCGAGGCTGCGGAAGGTGGAAGAAGTGAGTGGGGGAGGGA
AGGTGGATGAAGGAATATTGGAGGAGGACTGGGATCCGGAGGCGTGGGAC
CGTCAGATGGCGCAGGCGTTTGGGGAGGAGTATTACCACGAGGGGGAGAA
GGAGGAATGGAAGCCGGAAGGGGGGGGGGGAGGAGGAAGAAGAGGAGGAC
GACGACGGGGAAGGGGATGAATGGGACGCAAGGACAAGGACAAGGCCAAG
GAGGTCAAGAACAAGCAGCAAATCTTTAACGACGACGACGATGGGGAGTC
CGACGAAGGGGACGAGACTGGGAACGACAAGCTCCGCGTGAACAAGGCCT
ACGCCTCCCACTTTGAAGCCACCAAGAAGAAGCAAGAGCTCGTACAGCTC
GGCCGGTACCATCGCAATGGCAGCATCAACAGTAGCAGCAGGAAAAGGGG
TGGATTGTCGGACTCCTCTTCAGAGAGTGAAGGAGAGGAAGACTCGGACG
CCTCTTCATCCGACGAAGAAGACGAGGACGGGGAAGCGCTCACGCCGGCA
TTAGAGGTACAGATACTGCAGACCATAAATAGCATTAGGGCCAAGGACCC
CAAGATCTATAGGCAGGATGTCACGTGGTTTGCTGGTCAAGAAGAGGAGG
AGGAGGAGGAGGAGGAAGGGAGAGAGGAGGGGAATGTTAAGGAGGATAGA
CGCAAGACATACAAAGATGTGATTCGAGAGCAGGTGTTGGCAGCAGCGAA
GGCAGGAAGGGATGAGATTGACTCGTCGTCGGACGAGGACAAGGAGGGAG
GGAGGAAGGGAGGGAGAGATGGAGGGGAGCCGGTGTCGAGTCGCAGGATG
GCTTATGATGCTGAGCAGTTGAAGTTGAGGAAAGCGTTTTTGGAGGCGGC
GGTGGAGGTTGAAGAGGGGGAAGAAGAGAAGGAAGGAGGGATGAAGAGGA
TGAAGAGGAAGAAGGGGAGGAATGAACTGGAAGGGGAAGAGGGGGAAGAG
GGAGAGGAGGGAGGGGAGGAGGGACTTTTTGAGGGGTCGGGGCTGCTGAC
CATCAGGAAGCGTGGCGCGAAAGAGTCTGCAATATTTGACAAACAGATAC
AAGAGGAAGTGGAAAAGATGGTGAGGGGTGCTGGGCAGGTGGGTGGGAGG
GAGAGCCAGGAGGAGGAGAAGGAGAGGGAGAAGGATTTGTTTTTAAGGGA
TTTTGTCTTGGGGAAGAAATGGCGGGAGGAGGGGGAGGAGGAGGACGAGG
AAGCGTCAGGGAGGGGAAGAAGAGGAAGAGAAGGGCAACAGGAGGAGGTG
GGGAATGTGGATGCGGGGGAGGAGGGGCATTATGGCCCAGTGAGGGAGGG
AGGGAGGGAGGGCGGGGTGGATGGAGGGGTGGATGATGAGGAGGACGCGG
AGGAGGTGGAGAAGATGGAAATGTTTGAGAGTAAATATAATTTTCGGTTC
GAGCAGGAAGGAGGGACCGCGCTTGTCTCATACGGTAGAACGGTTGAAGG
TTCTGCGCGTCGGAAAGACGACAAGAGGAAAAAGGAGCGGGAAGCCTACA
AGAAACGAAAAGAAGAGGAACGGAAGAAGAAGGAGGAAGAACTAAGACGG
CTCAAGAATTTGAAAAAGGAAGAGATACGGGCGAGGCTGCGGAAGGTGGA
AGAAGTGAGTGGGGGAGGGAAGGTGGATGAAGGAATATTGGAGGAGGACT
GGGATCCGGAGGCGTGGGACCGTCAGATGGCGCAGGCGTTTGGGGAGGAG
TATTACCACGAGGGGGAGAAGGAGGAATGGAAGCCGGAAGGGGGGGGGGG
AGGAGGAAGAAGAGGAGGACGACGACGGGGAAGGGGATGA back to top
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