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Properties
| Property Name | Value |
|---|
| TranscriptId | 576763 |
| Track | FilteredModels2 |
| ProteinId | 576677 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:611898..617245 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_243 ID=mRNA_243|Name=jgi.p|Nanoce1779_2|576677|organism=Nannochloropsis oceanica|type=mRNA|length=1581bp
TCTTCTTCTCCTTCCTCAATAGCAGCAGCGCTAGCACAGACATGAAGCAG
CGGCGGCGGCAGTAGTAGCTCAAGCTGTGGCAGCAGTGAAGGTCTGTCAC
CTCGCCCCCTTACACCGACATACTTTGATGCGGTGACGGCGCCTGTGGGG
ACCGGGACACTGACGCTAGGTGATCTGGAGTGCGGCGTCTGTCTAAGCTT
GTTGTGTGAAGCTGTTACAACGCCATGCGGTCACAGTCTCTGCCGACTCT
GTTTGGTTCAGGCATTGCAACGACAAACCAAGTGCCCGGTCTGTCGAGCT
GTTTGCATGATCAACGCGGAGGACCACGCCGAGACCCGCCTTTTGACCCG
CCTAGCCAAACGAGCCTTTCCTATCCTGTACGAGCAACGCTTGGAGGAAA
CGCGCCAAGAACGAGAAGCGATGAAGCTGTTGTTGCCCATCTTCTTTTAC
AATCTTCCTATTTTTCCTGGGGAGGTTTTGCGTTTACACTTGTTCGAGCC
TCGTTACCGCTTGATGATGCAGCGCATTGTGGACGGTAGCCGACGGTTTG
CTTACGTACCTAATTACTCTAATTATCGCGGCGCAAAAGATGACGTGGCT
CTTATAGCTGAAGTAAAGGAAGTACGGTTCATGCGCGACGGACGAAGTGA
GCTCGAGGCTCGAATCGTGGGTCGCTACACCATTGTCGAAAGTCCTTACG
TAGAGGAAGGGACCGGGGGATTGAGCTATTGTCGGCTGGCAGAGCTTCGT
GATGTGGCCCCAGCCTCATCGGAGGCTGGAGAGGCTTTGATGAAAGTTAG
CGCCAAGGCACGAGAGATTGCACATGCGCTGTTTTATGAGAGGAGGGACA
TAAAAGCAGTGGTTGTGGATAGGTACGGGGATATGCCTGGCCCGCACACA
CCTGAAGCGCTTTCGCTTTGGATCGCTGCAGTTTTGCCCACAGAAAATCG
GCAGGAGAAGCATGCGTTGCTCGTATGTACGGATACACTGTACCGCCTCA
ACACGTGCTTGGCCAAGTTGCAGGCGTTGCGGGGTGAGGCTGCTTAAATG
TGCATGACAGGAGAAGAGAGTGGTGAAATAGTCGAAAGTTGAATCGAAGA
GTGTGTTTCATTTGATAGTGCAAAGGCTACTTGGAGTCACAAAGCTGCAT
GACTCAAAACAAACAGACATCAACCGTTATGTCCAGATATACATAGTCTG
TACACTCACGCACACACGCCACCACCACCGCAACTATACCTATGGCTCCC
TCTCCTCAGATCTTCGTTATACTTCGTGTCCTTGCGGAGGGTCGAGGTTC
CCTGTACGTGCTCTCTATGTCGGTGAGGGAAGTTCTGATGGGAGAAAACG
AAGAGGAAAAAGAAAGGGACAGGGATGTCATCGGTGACCACAAGATAAGA
AAAACAGAATAACGTGCATATTATTTTATGAGAGATTTAAGTTGAGAAAG
ATAGGAGGTGGGAGGAATGGGAAGAAACGAAGACGAATGTGAAGACAGGA
AATAGCAGTGAGCAGAGAGGAAAGGCATGAAGAGCGCAGGCGGACGCACA
AAATATATCACCATGTAATCGGAGATTGAAA back to topprotein sequence of jgi.p|Nanoce1779_2|576677 >mRNA_243-protein ID=mRNA_243-protein|Name=jgi.p|Nanoce1779_2|576677|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNL
PIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALI
AEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV
APASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDRYGDMPGPHTPE
ALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRGEAA* back to topmRNA from alignment at scaffold_3:611898..617245- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_243 ID=mRNA_243|Name=jgi.p|Nanoce1779_2|576677|organism=Nannochloropsis oceanica|type=mRNA|length=5348bp|location=Sequence derived from alignment at scaffold_3:611898..617245- (Nannochloropsis oceanica)
TCTTCTTCTCCTTCCTCTTCCGCTCTATTTTGTGCCGGTTGCTGTCATCC
ACCTCCAGCTCTCGGATCAAGTCGTCCAGTGGTCGGCTATCTCTGTCGCT
CTCTTCTCCACTAATTCCGTTTTCGACCGCAAAGCCAAAGGCGAAGGTCT
TGCGCTTCTCCTGCAATTTGGACGTAAGCCGGCTCAGCATCTTCTCCATG
GCCTCTTCCCCACCGTGAGCTCGCCTTTGCTTCAAGCCCCCCGTGTCGCG
TGCTTTACTGTTTGGACCGGGGGCGGTGGCTGCGGCCGCGGCACCTTGAG
CTGGCTCTCCCATCCCATGCATCGATTCGGGCCGCAGTTCCCGCCGCACA
AAGTGTCTTGCTAAGGGCGTGCTGCCTACCATTCTTGCAGTGGTATAGCG
TGGAGTGATTGTCTAGGTGGGCATTTCTTTTAGCAGTAAAGTAGGAAAGG
GTGGTGAGATAGTGTAGCAAGTGGTCGTGAAGTGAAAGCGCATCGCAAGA
GGCGTGGCTTGAGATGCTTGGGCAGGAGGCTTGTGTGGTGAGTTTTTGAT
TGGATGGATGATGATGAGTGTCATCTAGCGAGGGGCGGGAGGGCTGTGAC
AGGCTTCTGGTCTCTCTCCAACTAGCTTGTAAGCCAATCGCATGTTGTGT
GCTTCGGCAGCTCGGCCTTTCAACCAGACAATGCGAGCGTAAGGGTGGCT
GTGGTCTCGAATGGATGGAAGGTCGAGAAGGGTCGAGGATGCTCAATTTG
GCGGCGAGTGACGACGCCGTCGTGACGTGCGGGGAGGCGGCCCGGGAGAA
GAGGAAAGTGGGCCATATGCATTGCAATCTGACACCTCCATACAAGAAGG
GGTACCACCGCGTCTTACAGTCCTTTCTCCAATCGATCTTGAAAGTTTTG
CACATTAGCGGAGCATGTTACGGTAGTGAAGCATGTCTCCCCGCCCAACC
TTCTTCCACGGCCGTCCCTGAGGACTGCCCCACATCCAAAATCCACGAAC
ACAGTCATGCATGTATACATCGCCCTATTCTTGGCTGACTTTACAGCTCT
AAACCACGGATGCACACAACACAGGCGTAGCTTCGTCCCCCCCATCACCG
AATTATGCTGGGCTTTCGCCGCCAGAGCAAGCGGGACCGCGGTATGTCCA
TTCGCAACCTCTCACACGAGGGCGTTGAAGAGAGTAGAAACCTGTGGCAC
ACCGGGGGGGCTCCGGCTCGTCTGGGTAAGACGCACAAGCCCGTAGTCCT
TGTTATGGGAGACTCGCATACGCAAGGCATGTACGGGGCCTGTTATGTCA
AACTGCTCCAAGCCAAGTTTCCTAAGTTTCACATCGTCAACGGAGGCCGG
AATGGCGAAGTCCTGGAAAGCATTCGAAGACGTACTGGCTCTTACCTCAA
GACGTATGGTGGTGACATAGTGGGGGTCATTATCCTAGGCGGCACCAACG
ACTGTCTCGCCAACCTCAATTCCTCGACACGGACGCTCATTCGTCTATAT
AACCCTTTTTTGAAGGAACTCCCACCCCTGACCGAGTACACCAAGACGTT
ACACAAGCTTTTGGCCATGATTTACTCGCATTCGGCCTCTTCTTACATCG
ATATTTGCTGCGTGACCCCGCCAATTATCGCTGAGTTTCCTAGCTCTCCT
GAAAACGTGGTGGTGGATAGTCTGTGTGAGGCCATCCGGAAGACAGTGCG
CGATTTCACGCACGTTAAGAACGAGAACGTGCGCGCCCGGGGGTCATCTG
ACAGCCTGGAAAAGAGTGCTGGGACAACTGGAAGAATTCATGGGGTGATT
AGCATCAGCATTGAGGAGAATGTGGAAGTGCAAGATGGCAAAGCTCATAA
GCAACAGCAGCAGAAGCAGCAGCAACAGCAGTCGCTTCAGCCTACGCATT
CCCTTATCAACTATTCTTCTCACCACAGATACTGCCCTTCCACATCTGCC
CTTTTCCCTTCGTCTTCATGCTTTGGAAACTCCAAGCATCCCAAACCGCG
GCTACGTCGTCGTTTGCACTGCATCGATTTTAACGCGCGGATGAAACGAC
ATCTGGAGGAAGTGCTTGGTCATAAAACGCGCAAAGCATTTGAGCCCGAC
TTTTTTAATATGTGTTTCAATAGCGGGATGAGCTTGTTAAGCGGGGCTTT
GGTGAAATGGGACACAGTGTCGGCAGCTCGGGGATTGGCGCTGCACAACG
ACGGCGTGCACTTGAATGAAAGGGCGATCGAGCCGCTCGTCAACTCATTG
AGTGCCTGGTTGGAAGCACTCCAAGAAGAAATCTACATGCAGCATACCCG
GGAGGCATATGCGTCGGCGTCTTCAGGGGAGCAGCTTTTGTCTTCTTTGG
TCTCTACCTTGAAATTCGCAGAGGAAACTATAAGGGGGGGGGAAGGACGG
GAGGCCGCGATTACAGCTGAACGCGGGAAGAACGGATCGGGAATAGACAT
TGCAGAGAGACATGGAGATATTTTAAGCATGGTTGATAGTGATGTTGAGG
TCATGCCTGAAAATGACACCATTGAGGCCAGTAAGGGGGTTGATATGGCG
GGAGAGGCCAGTTTGGTTAGGCCCGTGATGAGGCGGGCATTGGCGTGAAG
GAGGAGGCACACACTTTGTACTTAGATACCAAAATGTATTGCGAATGCAG
GTTTTTAAATAGCAATCAAAGGAAAGCGTAAAATCGATGTCCGTATGTGG
AGTAGTCCGTATGTGGAGTAGTGGAGTAAAGAAGGAGTTTGCATGTGCGA
CCCGTTGATGGGAAACAACCAAACTGTGGCACCCCCAGCCTTTTCTCAGG
CACCTATTTAATTTATTTGGGGTCAAGCTTTGCGGTTCTTCTAAGTCAAG
CTTTGCGCTTCTTCTTATTCTTTGACTGTCATAATCGATAATATTGTTTT
TTCATGCATACGACAATTTCACGGGTTTTGGGATAAAAGGATGTGAGAGG
GCATTCCAGGACAGATGAAACGTTCTGAAAACCACATGTGAAACATTTTT
TCCATTTCCTGATTCTGAAATAAACCAAAATCGTGTGGGACGGGAAGTGT
CTCACAGAAGTATTTACCATGTGCTATTCGAGTTCCAAAAGATCGACGCC
AACAGCTCGACAGTGCATGTCGCCACGTTTGGGTTTATTCCCCCTGGTCC
ACGCACGATAAGATCCGCATACAGTCAGCAGGGCCTGCTAGCTTCCAAAA
ACATGCCACCAAACTCAACGACCAGTGGCTAGGGTGTTATGACCTCATTT
TCGGCTGTACTTGCGCTCCGATTTCACAATATAGGGGAACCGAAAGGTCA
ACACCGTCGGTGCTGCGAGCTCTGATGTCAGTAAGTTGGTAACTTTGTTC
CTCGCGGGTAGCTGTAGAGAAAGGACAAGGACGTACCAATACCTAGTCTG
ACCATTCTGTATATAAGTCTTGGTACATTCAACTCCAAGTTACGGTCTGG
GGTTGTTTGTACGTCGTACGTCGCACCTCCCCGGCCACTGAATCCACGCA
CTTTATATACCTCATCTCCACACCTTCGCTCATCACATGCACTCTGAACA
GGCCGCCGTTTGCCAGCCAAGTTCACACAAAGAAGTATTGCGCGCCAGGG
CACCCATTAGCGCTCATCTACTCAAGCAACGCTTATTCTCCTACACTCAA
GTCATGGTACAAACACGCAGCTCACCTGGCCACTCGATTCCGGCGCCAGA
CGCCACCGCAGTCGCCGGTGCTGCTGCCGCCACGACAGAGGGCGAGGACC
ACGGTAATAGCAGCAGCGCTAGCACCGAAAAAACTACTCCTAACAGACAT
GATATCAGTACTAGCAGCGGCGGCGGCAGTAGTAGCTCAAGCTGTGGCAG
CAGTGAAGGTCTGTCACCTCGCCCCCTTACACCGACATACTTTGATGCGG
TGACGGCGCCTGTGGGGACCGGGACACTGACGCTAGGTGATCTGGAGTGC
GGCGTCTGTCTAAGCTTGTTGTGTGAAGCTGTTACAACGCCATGCGGTCA
CAGTCTCTGCCGACTCTGTTTGGTTCAGGCATTGCAACGACAAACCAAGT
GCCCGGTCTGTCGAGCTGTTTGCATGATCAACGCGGAGGACCACGCCGAG
ACCCGCCTTTTGACCCGCCTAGCCAAACGAGCCTTTCCTATCCTGTACGA
GCAACGCTTGGAGGAAACGCGCCAAGAACGAGAAGCGATGAAGCTGTTGT
TGCCCATCTTCTTTTACAATCTTCCTATTTTTCCTGGGGAGGTTTTGCGT
TTACACTTGTTCGAGCCTCGTTACCGCTTGATGATGCAGCGCATTGTGGA
CGGTAGCCGACGGTTTGCTTACGTACCTAATTACTCTAATTATCGCGGCG
CAAAAGATGACGTGGCTCTTATAGCTGAAGTAAAGGAAGTACGGTTCATG
CGCGACGGACGAAGTGAGCTCGAGGCTCGAATCGTGGGTCGCTACACCAT
TGTCGAAAGTCCTTACGTAGAGGAAGGGACCGGGGGATTGAGCTATTGTC
GGCTGGCAGAGCTTCGTGATGTGGCCCCAGCCTCATCGGAGGCTGGAGAG
GCTTTGATGAAAGTTAGCGCCAAGGCACGAGAGATTGCACATGCGCTGTT
TTATGAGAGGAGGGACATAAAAGCAGTGGTTGTGGATAGGTACGGGGATA
TGCCTGGCCCGCACACACCTGAAGCGCTTTCGCTTTGGATCGCTGCAGTT
TTGCCCACAGAAAATCGGCAGGAGAAGCATGCGTTGCTCGTATGTACGGA
TACACTGTACCGCCTCAACACGTGCTTGGCCAAGTTGCAGGCGTTGCGGG
GTGAGGCTGCTTAAATGTGCATGACAGGAGAAGAGAGTGGTGAAATAGTC
GAAAGTTGAATCGAAGAGTGTGTTTCATTTGATAGTGCAAAGGCTACTTG
GAGTCACAAAGCTGCATGACTCAAAACAAACAGACATCAACCGTTATGTC
CAGATATACATAGTCTGTACACTCACGCACACACGCCACCACCACCGCAA
CTATACCTATGGCTCCCTCTCCTCAGATCTTCGTTATACTTCGTGTCCTT
GCGGAGGGTCGAGGTTCCCTGTACGTGCTCTCTATGTCGGTGAGGGAAGT
TCTGATGGGAGAAAACGAAGAGGAAAAAGAAAGGGACAGGGATGTCATCG
GTGACCACAAGATAAGAAAAACAGAATAACGTGCATATTATTTTATGAGA
GATTTAAGTTGAGAAAGATAGGAGGTGGGAGGAATGGGAAGAAACGAAGA
CGAATGTGAAGACAGGAAATAGCAGTGAGCAGAGAGGAAAGGCATGAAGA
GCGCAGGCGGACGCACAAAATATATCACCATGTAATCGGAGATTGAAA back to topCoding sequence (CDS) from alignment at scaffold_3:611898..617245- >mRNA_243 ID=mRNA_243|Name=jgi.p|Nanoce1779_2|576677|organism=Nannochloropsis oceanica|type=CDS|length=741bp|location=Sequence derived from alignment at scaffold_3:611898..617245- (Nannochloropsis oceanica)
ATGATCAACGCGGAGGACCACGCCGAGACCCGCCTTTTGACCCGCCTAGC
CAAACGAGCCTTTCCTATCCTGTACGAGCAACGCTTGGAGGAAACGCGCC
AAGAACGAGAAGCGATGAAGCTGTTGTTGCCCATCTTCTTTTACAATCTT
CCTATTTTTCCTGGGGAGGTTTTGCGTTTACACTTGTTCGAGCCTCGTTA
CCGCTTGATGATGCAGCGCATTGTGGACGGTAGCCGACGGTTTGCTTACG
TACCTAATTACTCTAATTATCGCGGCGCAAAAGATGACGTGGCTCTTATA
GCTGAAGTAAAGGAAGTACGGTTCATGCGCGACGGACGAAGTGAGCTCGA
GGCTCGAATCGTGGGTCGCTACACCATTGTCGAAAGTCCTTACGTAGAGG
AAGGGACCGGGGGATTGAGCTATTGTCGGCTGGCAGAGCTTCGTGATGTG
GCCCCAGCCTCATCGGAGGCTGGAGAGGCTTTGATGAAAGTTAGCGCCAA
GGCACGAGAGATTGCACATGCGCTGTTTTATGAGAGGAGGGACATAAAAG
CAGTGGTTGTGGATAGGTACGGGGATATGCCTGGCCCGCACACACCTGAA
GCGCTTTCGCTTTGGATCGCTGCAGTTTTGCCCACAGAAAATCGGCAGGA
GAAGCATGCGTTGCTCGTATGTACGGATACACTGTACCGCCTCAACACGT
GCTTGGCCAAGTTGCAGGCGTTGCGGGGTGAGGCTGCTTAA back to top
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