Properties
| Property Name | Value |
|---|
| TranscriptId | 525243 |
| Track | FilteredModels2 |
| ProteinId | 525157 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:321436..322424 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2426 ID=mRNA_2426|Name=jgi.p|Nanoce1779_2|525157|organism=Nannochloropsis oceanica|type=mRNA|length=690bp
ATGGTGCAAAGCCTGAACTTCCAAGGCATCCTGGCCGTGGGTCAAGTCCT
TCGCAACCCTTCCTTGATGCTCCCGCACATCTCGATCAAGCACATCGGCC
TGCTAGACTTTGAGCTCTTGCGACAAGCCGGCATCAAAGGCATTGTTTTT
GACAAGGACAATACCCTCACCGCCCCCTACATCGACTCCATCCACCCGCA
AGTCGCCGCTGCTTTCGAAAACTCCAAACGCGTGTTCGGCGCCAAGAGGC
TCCTCATCATTTCCAATTCTGCGGGTACCCTTGACGATACCAACTACGAG
GCAGCCACGCGGATCGAGGCAGAACTGGGTGTGCCCGTCCTAAGACATTC
GATCAAAAAGCCAGGGGCTATCCCCGAGGTACTAGAACATTTTAAACGAG
AATGTGGTCCAGAGACGACCTACGAAAACTTGTGTATCATTGGTGATCGG
CTTTTGACTGATGTCATGTGGGGAAATTTCGCTGGCATGTTCACGGTGCA
TACGCAGATCTTGACCCCGATGGGGGATAATAAAGTGGCAGCAATCGTGA
GAAGGTTGGAGAATGTGGCGTGCAGAATTTTGAGCCGACACTGGACGGCG
ATGCCGCATCCAGCGTTGGCATCCCGGGTGGTGTTTGGTGAGGCCGGGGA
GGGGGAGGGGGGAGGAGGAGAGGCTAAGAAGGAAGCTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|525157 >mRNA_2426-protein ID=mRNA_2426-protein|Name=jgi.p|Nanoce1779_2|525157|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MVQSLNFQGILAVGQVLRNPSLMLPHISIKHIGLLDFELLRQAGIKGIVF
DKDNTLTAPYIDSIHPQVAAAFENSKRVFGAKRLLIISNSAGTLDDTNYE
AATRIEAELGVPVLRHSIKKPGAIPEVLEHFKRECGPETTYENLCIIGDR
LLTDVMWGNFAGMFTVHTQILTPMGDNKVAAIVRRLENVACRILSRHWTA
MPHPALASRVVFGEAGEGEGGGGEAKKEA* back to topmRNA from alignment at scaffold_5:321436..322424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2426 ID=mRNA_2426|Name=jgi.p|Nanoce1779_2|525157|organism=Nannochloropsis oceanica|type=mRNA|length=989bp|location=Sequence derived from alignment at scaffold_5:321436..322424- (Nannochloropsis oceanica)
ATGGTGCAAAGCCTGAACTTCCAAGGCATCCTGGCCGTGGGTCAAGTCCT
TCGCAACCCTTCCTTGATGCTCCCGCACATCTCGATCAAGCACATCGGCC
TGCTAGACTTTGAGCTCTTGCGACAAGCCGGTAAGTTGCACGGCAGACAG
GAAGGGAGAATCATATTGCGAAAGATGGAGGGCTCGTGAGATGCGTAGGT
AGGCGTGGCTAGTGGACGCCTTGTGTTTTAAAAGGCTCTTCGCCAGTCGT
CAACCTCTTCCGCTCATCCCTCTTTTGCCCTCCCTACCCACAGGCATCAA
AGGCATTGTTTTTGACAAGGACAATACCCTCACCGCCCCCTACATCGACT
CCATCCACCCGCAAGTCGCCGCTGCTTTCGAAAACTCCAAACGCGTGTTC
GGCGCCAAGAGGCTCCTCATCATTTCCAATTCTGCGGGTACCCTTGACGA
TACCAACTACGAGGCAGCCACGCGGATCGAGGCAGAACTGGGTACGTTTC
TGAACCAAATAATGTTGAACCTTTCTGCCTAAAATTGCCATTAGCAGCAC
AAGAAGGTTCATGTCGCTACTCTCTATCTTCTGTACACTGACAACCTTCA
CTCCCTCCTCCCCTTGCCTCCCCCTAGGTGTGCCCGTCCTAAGACATTCG
ATCAAAAAGCCAGGGGCTATCCCCGAGGTACTAGAACATTTTAAACGAGA
ATGTGGTCCAGAGACGACCTACGAAAACTTGTGTATCATTGGTGATCGGC
TTTTGACTGATGTCATGTGGGGAAATTTCGCTGGCATGTTCACGGTGCAT
ACGCAGATCTTGACCCCGATGGGGGATAATAAAGTGGCAGCAATCGTGAG
AAGGTTGGAGAATGTGGCGTGCAGAATTTTGAGCCGACACTGGACGGCGA
TGCCGCATCCAGCGTTGGCATCCCGGGTGGTGTTTGGTGAGGCCGGGGAG
GGGGAGGGGGGAGGAGGAGAGGCTAAGAAGGAAGCTTGA back to topCoding sequence (CDS) from alignment at scaffold_5:321436..322424- >mRNA_2426 ID=mRNA_2426|Name=jgi.p|Nanoce1779_2|525157|organism=Nannochloropsis oceanica|type=CDS|length=2070bp|location=Sequence derived from alignment at scaffold_5:321436..322424- (Nannochloropsis oceanica)
GTGTGCCCGTCCTAAGACATTCGATCAAAAAGCCAGGGGCTATCCCCGAG
GTACTAGAACATTTTAAACGAGAATGTGGTCCAGAGACGACCTACGAAAA
CTTGTGTATCATTGGTGATCGGCTTTTGACTGATGTCATGTGGGGAAATT
TCGCTGGCATGTTCACGGTGCATACGCAGATCTTGACCCCGATGGGGGAT
AATAAAGTGGCAGCAATCGTGAGAAGGTTGGAGAATGTGGCGTGCAGAAT
TTTGAGCCGACACTGGACGGCGATGCCGCATCCAGCGTTGGCATCCCGGG
TGGTGTTTGGTGAGGCCGGGGAGGGGGAGGGGGGAGGAGGAGAGGCTAAG
AAGGAAGCTTGAGCATCAAAGGCATTGTTTTTGACAAGGACAATACCCTC
ACCGCCCCCTACATCGACTCCATCCACCCGCAAGTCGCCGCTGCTTTCGA
AAACTCCAAACGCGTGTTCGGCGCCAAGAGGCTCCTCATCATTTCCAATT
CTGCGGGTACCCTTGACGATACCAACTACGAGGCAGCCACGCGGATCGAG
GCAGAACTGGATGGTGCAAAGCCTGAACTTCCAAGGCATCCTGGCCGTGG
GTCAAGTCCTTCGCAACCCTTCCTTGATGCTCCCGCACATCTCGATCAAG
CACATCGGCCTGCTAGACTTTGAGCTCTTGCGACAAGCCGGTGTGCCCGT
CCTAAGACATTCGATCAAAAAGCCAGGGGCTATCCCCGAGGTACTAGAAC
ATTTTAAACGAGAATGTGGTCCAGAGACGACCTACGAAAACTTGTGTATC
ATTGGTGATCGGCTTTTGACTGATGTCATGTGGGGAAATTTCGCTGGCAT
GTTCACGGTGCATACGCAGATCTTGACCCCGATGGGGGATAATAAAGTGG
CAGCAATCGTGAGAAGGTTGGAGAATGTGGCGTGCAGAATTTTGAGCCGA
CACTGGACGGCGATGCCGCATCCAGCGTTGGCATCCCGGGTGGTGTTTGG
TGAGGCCGGGGAGGGGGAGGGGGGAGGAGGAGAGGCTAAGAAGGAAGCTT
GAGCATCAAAGGCATTGTTTTTGACAAGGACAATACCCTCACCGCCCCCT
ACATCGACTCCATCCACCCGCAAGTCGCCGCTGCTTTCGAAAACTCCAAA
CGCGTGTTCGGCGCCAAGAGGCTCCTCATCATTTCCAATTCTGCGGGTAC
CCTTGACGATACCAACTACGAGGCAGCCACGCGGATCGAGGCAGAACTGG
ATGGTGCAAAGCCTGAACTTCCAAGGCATCCTGGCCGTGGGTCAAGTCCT
TCGCAACCCTTCCTTGATGCTCCCGCACATCTCGATCAAGCACATCGGCC
TGCTAGACTTTGAGCTCTTGCGACAAGCCGGTGTGCCCGTCCTAAGACAT
TCGATCAAAAAGCCAGGGGCTATCCCCGAGGTACTAGAACATTTTAAACG
AGAATGTGGTCCAGAGACGACCTACGAAAACTTGTGTATCATTGGTGATC
GGCTTTTGACTGATGTCATGTGGGGAAATTTCGCTGGCATGTTCACGGTG
CATACGCAGATCTTGACCCCGATGGGGGATAATAAAGTGGCAGCAATCGT
GAGAAGGTTGGAGAATGTGGCGTGCAGAATTTTGAGCCGACACTGGACGG
CGATGCCGCATCCAGCGTTGGCATCCCGGGTGGTGTTTGGTGAGGCCGGG
GAGGGGGAGGGGGGAGGAGGAGAGGCTAAGAAGGAAGCTTGAGCATCAAA
GGCATTGTTTTTGACAAGGACAATACCCTCACCGCCCCCTACATCGACTC
CATCCACCCGCAAGTCGCCGCTGCTTTCGAAAACTCCAAACGCGTGTTCG
GCGCCAAGAGGCTCCTCATCATTTCCAATTCTGCGGGTACCCTTGACGAT
ACCAACTACGAGGCAGCCACGCGGATCGAGGCAGAACTGGATGGTGCAAA
GCCTGAACTTCCAAGGCATCCTGGCCGTGGGTCAAGTCCTTCGCAACCCT
TCCTTGATGCTCCCGCACATCTCGATCAAGCACATCGGCCTGCTAGACTT
TGAGCTCTTGCGACAAGCCG back to top
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