Properties
| Property Name | Value |
|---|
| TranscriptId | 580179 |
| Track | FilteredModels2 |
| ProteinId | 580093 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:148698..150751 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2360 ID=mRNA_2360|Name=jgi.p|Nanoce1779_2|580093|organism=Nannochloropsis oceanica|type=mRNA|length=1075bp
CGGACCTGGATCAGCAGTCCAGGTAGGGAGGGAGGGACGGACGGAGGAAG
GGACGGAGGGAGGGAGGGAGGGACAGTGCGACCAGCATTCTTAGAAGGGA
AAGAGGGAGGAGCAGTGCGTGTATGACGCAAGACAATCATGCCCTCGTTA
CCACCCACTCTCTGCACCGTCCCCCGGCGACCATAGGGATGCGAACGCCA
GCAAGCCTCTCTTCAAGTCGCACCTCATCGAGGGCATCCTCCTTCGAGAC
CTCACTCCCCCCAACAAGTACACAGTGCAGTGGGGCGCCAGCCACGTCCT
TCAATCCGCGCACAACGAGGCTGGACGAGGCATGGAGCTGTCCGAACTCA
TCAGTTACAAGGGAACACTCTACACCGTCGACGATCGGACGGGCATCGTT
TTCGAGGTCTTAGACGGCGATAAAAAAACGCCCCAAGTCGTGCCCAAATG
GATCATCATGGAGGGCGACGGCATGACGGATAAGGGCATGAAGCTGGAAT
GGGCGACAGTGAAGGACGACAAGCTCATTCTCGGATCCTTCGGGAAGGCA
TATACCAGGCCAGACGGCTCGATCCTCAACAGCAACAATCTGTGGGTGAA
TGTGGTGGATGAGACGGGCACCATCGAGAGGTTTGACTGGGGCGACAACT
ACGAGAAGATAAGGAAGGTGTTGGGAGCCGATGACCCGGGCTACGTGATT
CACGAGGCGGCGTGCTGGTCCCCTATAAGGAGGGAATGGATCTTCCTCCC
CCGCCGGGTGTCCTCTCTGCCCTACGACGAGGAGCTGGACGAGAAAATGG
GCAGCAACAAGATCGTGATCGCCGACGAGACCTTCGAGAAGCTGGAGGTC
CGGGAGGTGGGCAAGATCACACCCGAGCGTGGATTCTCCTCGTTTAAGTT
CCTCCCAGGTAGTCGCGATAGCATTATATTGGCGCTTAAGAGTGTGGAGG
AGGCCGCCACGGGGAAGCAGGGCACGTACATCACGCTGTTTGACCTGAAG
GGCGAGGTGCTGCTGGACGAAACGCCTGTGCCCGGGGCATTTAAATTCGA
AGGGCTGGAGTTTGTGTACTAGGGC back to topprotein sequence of jgi.p|Nanoce1779_2|580093 >mRNA_2360-protein ID=mRNA_2360-protein|Name=jgi.p|Nanoce1779_2|580093|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MELSELISYKGTLYTVDDRTGIVFEVLDGDKKTPQVVPKWIIMEGDGMTD
KGMKLEWATVKDDKLILGSFGKAYTRPDGSILNSNNLWVNVVDETGTIER
FDWGDNYEKIRKVLGADDPGYVIHEAACWSPIRREWIFLPRRVSSLPYDE
ELDEKMGSNKIVIADETFEKLEVREVGKITPERGFSSFKFLPGSRDSIIL
ALKSVEEAATGKQGTYITLFDLKGEVLLDETPVPGAFKFEGLEFVY* back to topmRNA from alignment at scaffold_5:148698..150751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2360 ID=mRNA_2360|Name=jgi.p|Nanoce1779_2|580093|organism=Nannochloropsis oceanica|type=mRNA|length=2054bp|location=Sequence derived from alignment at scaffold_5:148698..150751- (Nannochloropsis oceanica)
CGGACCTGGATCAGCAGTCCAGGTAGGGAGGGAGGGACGGACGGAGGAAG
GGACGGAGGGAGGGAGGGAGGGACAGTGCGACCAGCATTCTTAGAAGGGA
AAGAGGGAGGAGCAGTGCGTGTATGACGCAAGACAATCATGCCCTCGTTA
CCACCCACTCTCTGCACCGTCCCCCGGCGACCATAGGGATGCGAACGCCA
GCAAGCCTCTCTTCAAGTCGCACCTCATCGAGGGCATCCTCCTTCGAGAC
CTCACTCCCCCCAACAAGTACACAGTGCAGTGGGGCGCCAGCCACGTCCT
TCAATCCGCGCACAACGAGGCTGGACGAGGCATGGAGCTGTCCGAACTCA
TCAGTTACAAGGGGTAAGCCGACTTTTCCCTTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTTCCTCGCCTCTCGCGCCTACGGGTCCTCCCTCTTCCGTCT
TCCGTGGATTCCCCCCACCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
CTCCCAACCCTCTAGAACACTCTACACCGTCGACGATCGGACGGGCATCG
TTTTCGAGGTCTTAGACGGCGATAAAAAAACGCCCCAAGTCGTGCCCAAA
TGGATCATCATGGAGGGCGACGGCATGTACGTATCCCCTCCCTCCCCCCC
TCCCTCCCTCCCTCCTTGCATGGTGGATGGGTCAATAGTACGAAAACGAT
GCATTCATCCCTCCCTCCCTCCCTCCCTCCTCCAGGACGGATAAGGGCAT
GAAGCTGGAATGGGCGACAGTGAAGGACGACAAGCTCATTCTCGGATCCT
TCGGGAAGGCATATACCAGGCCAGGTGAAGAGGGAGGGGTGAAGGGAGGG
AGGGAGGGAGGGAGGGAAGGGCGGGGGAGGATGGAAGGGAAAGGGTTCGT
GCAGGCTCTTCAAATCTCTCCACTCACTTCCCTCCTTTCCTCCCTCCCTC
CCTCCCTCCCTCCCTCAGACGGCTCGATCCTCAACAGCAACAATCTGTGG
GTGAATGTGGTGGATGAGACGGGCACCATCGAGAGGTTTGACTGGGGCGA
CAACTACGAGAAGATAAGGAAGGTGTTGGGAGCCGATGACCCGGTGCGTC
CGCATGTCCTTCCTCCCTCCCTCCCTTCTTTCCATTCCTCCCTCTCTCCC
TCCCTCCCTCCCTCCCTCCCTCCGTTCCTCCCTCCTTCTCCTCTGCTCCC
GCTTCCTAAAACCCTCCCTCCCTCCTCCCTCTCTCCCTCCCAGGGCTACG
TGATTCACGAGGCGGCGTGCTGGTCCCCTATAAGGAGGGAATGGATCTTC
CTCCCCCGCCGGGTGTCCTCTCTGCCCTACGACGAGGAGCTGGACGAGAA
AATGGGCAGCAACAAGATCGTGATCGCCGACGAGACCTTCGAGAAGGTAG
GGAGGGAGGGAAGGAGGGAGGGAGGGCGGGTGAGAGGAGAGGAGGGGCTA
TAGAATCTGAGGGTGGTTGTCGCTGACTTCTTCGAGAGGGTGAGGCTCGG
CCCTTCCTCTTTCCCGTCCTCCCTCCCCTGCCTGCTCGGTACATGACTCC
GACAATCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCATTCC
CAGCTGGAGGTCCGGGAGGTGGGCAAGATCACACCCGAGCGTGGATTCTC
CTCGTTTAAGTTCCTCCCAGGTAGTCGCGATAGCATTATATTGGCGCTTA
AGAGTGTGGAGGAGGCCGCCACGGGGAAGCAGGTTCGTACGGTTAAGGGA
GGGAAGGAGGGAGAGATGCAGGAAGGGATCGAGGGCGGGACGGAGCGCCT
ATGTCTTGTTTCCCCACACACACACTAAAGCGCTCGACCCCATGCCCCCT
TCTCTCCTTCCTCCCTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCTCAGG
GCACGTACATCACGCTGTTTGACCTGAAGGGCGAGGTGCTGCTGGACGAA
ACGCCTGTGCCCGGGGCATTTAAATTCGAAGGGCTGGAGTTTGTGTACTA
GGGC back to topCoding sequence (CDS) from alignment at scaffold_5:148698..150751- >mRNA_2360 ID=mRNA_2360|Name=jgi.p|Nanoce1779_2|580093|organism=Nannochloropsis oceanica|type=CDS|length=5187bp|location=Sequence derived from alignment at scaffold_5:148698..150751- (Nannochloropsis oceanica)
GGCACGTACATCACGCTGTTTGACCTGAAGGGCGAGGTGCTGCTGGACGA
AACGCCTGTGCCCGGGGCATTTAAATTCGAAGGGCTGGAGTTTGTGTACT
AGCTGGAGGTCCGGGAGGTGGGCAAGATCACACCCGAGCGTGGATTCTCC
TCGTTTAAGTTCCTCCCAGGTAGTCGCGATAGCATTATATTGGCGCTTAA
GAGTGTGGAGGAGGCCGCCACGGGGAAGCAGGGCTACGTGATTCACGAGG
CGGCGTGCTGGTCCCCTATAAGGAGGGAATGGATCTTCCTCCCCCGCCGG
GTGTCCTCTCTGCCCTACGACGAGGAGCTGGACGAGAAAATGGGCAGCAA
CAAGATCGTGATCGCCGACGAGACCTTCGAGAAGACGGCTCGATCCTCAA
CAGCAACAATCTGTGGGTGAATGTGGTGGATGAGACGGGCACCATCGAGA
GGTTTGACTGGGGCGACAACTACGAGAAGATAAGGAAGGTGTTGGGAGCC
GATGACCCGGACGGATAAGGGCATGAAGCTGGAATGGGCGACAGTGAAGG
ACGACAAGCTCATTCTCGGATCCTTCGGGAAGGCATATACCAGGCCAGAA
CACTCTACACCGTCGACGATCGGACGGGCATCGTTTTCGAGGTCTTAGAC
GGCGATAAAAAAACGCCCCAAGTCGTGCCCAAATGGATCATCATGGAGGG
CGACGGCATATGGAGCTGTCCGAACTCATCAGTTACAAGGGGGCACGTAC
ATCACGCTGTTTGACCTGAAGGGCGAGGTGCTGCTGGACGAAACGCCTGT
GCCCGGGGCATTTAAATTCGAAGGGCTGGAGTTTGTGTACTAGCTGGAGG
TCCGGGAGGTGGGCAAGATCACACCCGAGCGTGGATTCTCCTCGTTTAAG
TTCCTCCCAGGTAGTCGCGATAGCATTATATTGGCGCTTAAGAGTGTGGA
GGAGGCCGCCACGGGGAAGCAGGGCTACGTGATTCACGAGGCGGCGTGCT
GGTCCCCTATAAGGAGGGAATGGATCTTCCTCCCCCGCCGGGTGTCCTCT
CTGCCCTACGACGAGGAGCTGGACGAGAAAATGGGCAGCAACAAGATCGT
GATCGCCGACGAGACCTTCGAGAAGACGGCTCGATCCTCAACAGCAACAA
TCTGTGGGTGAATGTGGTGGATGAGACGGGCACCATCGAGAGGTTTGACT
GGGGCGACAACTACGAGAAGATAAGGAAGGTGTTGGGAGCCGATGACCCG
GACGGATAAGGGCATGAAGCTGGAATGGGCGACAGTGAAGGACGACAAGC
TCATTCTCGGATCCTTCGGGAAGGCATATACCAGGCCAGAACACTCTACA
CCGTCGACGATCGGACGGGCATCGTTTTCGAGGTCTTAGACGGCGATAAA
AAAACGCCCCAAGTCGTGCCCAAATGGATCATCATGGAGGGCGACGGCAT
ATGGAGCTGTCCGAACTCATCAGTTACAAGGGGGCACGTACATCACGCTG
TTTGACCTGAAGGGCGAGGTGCTGCTGGACGAAACGCCTGTGCCCGGGGC
ATTTAAATTCGAAGGGCTGGAGTTTGTGTACTAGCTGGAGGTCCGGGAGG
TGGGCAAGATCACACCCGAGCGTGGATTCTCCTCGTTTAAGTTCCTCCCA
GGTAGTCGCGATAGCATTATATTGGCGCTTAAGAGTGTGGAGGAGGCCGC
CACGGGGAAGCAGGGCTACGTGATTCACGAGGCGGCGTGCTGGTCCCCTA
TAAGGAGGGAATGGATCTTCCTCCCCCGCCGGGTGTCCTCTCTGCCCTAC
GACGAGGAGCTGGACGAGAAAATGGGCAGCAACAAGATCGTGATCGCCGA
CGAGACCTTCGAGAAGACGGCTCGATCCTCAACAGCAACAATCTGTGGGT
GAATGTGGTGGATGAGACGGGCACCATCGAGAGGTTTGACTGGGGCGACA
ACTACGAGAAGATAAGGAAGGTGTTGGGAGCCGATGACCCGGACGGATAA
GGGCATGAAGCTGGAATGGGCGACAGTGAAGGACGACAAGCTCATTCTCG
GATCCTTCGGGAAGGCATATACCAGGCCAGAACACTCTACACCGTCGACG
ATCGGACGGGCATCGTTTTCGAGGTCTTAGACGGCGATAAAAAAACGCCC
CAAGTCGTGCCCAAATGGATCATCATGGAGGGCGACGGCATATGGAGCTG
TCCGAACTCATCAGTTACAAGGGGGCACGTACATCACGCTGTTTGACCTG
AAGGGCGAGGTGCTGCTGGACGAAACGCCTGTGCCCGGGGCATTTAAATT
CGAAGGGCTGGAGTTTGTGTACTAGCTGGAGGTCCGGGAGGTGGGCAAGA
TCACACCCGAGCGTGGATTCTCCTCGTTTAAGTTCCTCCCAGGTAGTCGC
GATAGCATTATATTGGCGCTTAAGAGTGTGGAGGAGGCCGCCACGGGGAA
GCAGGGCTACGTGATTCACGAGGCGGCGTGCTGGTCCCCTATAAGGAGGG
AATGGATCTTCCTCCCCCGCCGGGTGTCCTCTCTGCCCTACGACGAGGAG
CTGGACGAGAAAATGGGCAGCAACAAGATCGTGATCGCCGACGAGACCTT
CGAGAAGACGGCTCGATCCTCAACAGCAACAATCTGTGGGTGAATGTGGT
GGATGAGACGGGCACCATCGAGAGGTTTGACTGGGGCGACAACTACGAGA
AGATAAGGAAGGTGTTGGGAGCCGATGACCCGGACGGATAAGGGCATGAA
GCTGGAATGGGCGACAGTGAAGGACGACAAGCTCATTCTCGGATCCTTCG
GGAAGGCATATACCAGGCCAGAACACTCTACACCGTCGACGATCGGACGG
GCATCGTTTTCGAGGTCTTAGACGGCGATAAAAAAACGCCCCAAGTCGTG
CCCAAATGGATCATCATGGAGGGCGACGGCATATGGAGCTGTCCGAACTC
ATCAGTTACAAGGGGGCACGTACATCACGCTGTTTGACCTGAAGGGCGAG
GTGCTGCTGGACGAAACGCCTGTGCCCGGGGCATTTAAATTCGAAGGGCT
GGAGTTTGTGTACTAGCTGGAGGTCCGGGAGGTGGGCAAGATCACACCCG
AGCGTGGATTCTCCTCGTTTAAGTTCCTCCCAGGTAGTCGCGATAGCATT
ATATTGGCGCTTAAGAGTGTGGAGGAGGCCGCCACGGGGAAGCAGGGCTA
CGTGATTCACGAGGCGGCGTGCTGGTCCCCTATAAGGAGGGAATGGATCT
TCCTCCCCCGCCGGGTGTCCTCTCTGCCCTACGACGAGGAGCTGGACGAG
AAAATGGGCAGCAACAAGATCGTGATCGCCGACGAGACCTTCGAGAAGAC
GGCTCGATCCTCAACAGCAACAATCTGTGGGTGAATGTGGTGGATGAGAC
GGGCACCATCGAGAGGTTTGACTGGGGCGACAACTACGAGAAGATAAGGA
AGGTGTTGGGAGCCGATGACCCGGACGGATAAGGGCATGAAGCTGGAATG
GGCGACAGTGAAGGACGACAAGCTCATTCTCGGATCCTTCGGGAAGGCAT
ATACCAGGCCAGAACACTCTACACCGTCGACGATCGGACGGGCATCGTTT
TCGAGGTCTTAGACGGCGATAAAAAAACGCCCCAAGTCGTGCCCAAATGG
ATCATCATGGAGGGCGACGGCATATGGAGCTGTCCGAACTCATCAGTTAC
AAGGGGGCACGTACATCACGCTGTTTGACCTGAAGGGCGAGGTGCTGCTG
GACGAAACGCCTGTGCCCGGGGCATTTAAATTCGAAGGGCTGGAGTTTGT
GTACTAGCTGGAGGTCCGGGAGGTGGGCAAGATCACACCCGAGCGTGGAT
TCTCCTCGTTTAAGTTCCTCCCAGGTAGTCGCGATAGCATTATATTGGCG
CTTAAGAGTGTGGAGGAGGCCGCCACGGGGAAGCAGGGCTACGTGATTCA
CGAGGCGGCGTGCTGGTCCCCTATAAGGAGGGAATGGATCTTCCTCCCCC
GCCGGGTGTCCTCTCTGCCCTACGACGAGGAGCTGGACGAGAAAATGGGC
AGCAACAAGATCGTGATCGCCGACGAGACCTTCGAGAAGACGGCTCGATC
CTCAACAGCAACAATCTGTGGGTGAATGTGGTGGATGAGACGGGCACCAT
CGAGAGGTTTGACTGGGGCGACAACTACGAGAAGATAAGGAAGGTGTTGG
GAGCCGATGACCCGGACGGATAAGGGCATGAAGCTGGAATGGGCGACAGT
GAAGGACGACAAGCTCATTCTCGGATCCTTCGGGAAGGCATATACCAGGC
CAGAACACTCTACACCGTCGACGATCGGACGGGCATCGTTTTCGAGGTCT
TAGACGGCGATAAAAAAACGCCCCAAGTCGTGCCCAAATGGATCATCATG
GAGGGCGACGGCATATGGAGCTGTCCGAACTCATCAGTTACAAGGGGGCA
CGTACATCACGCTGTTTGACCTGAAGGGCGAGGTGCTGCTGGACGAAACG
CCTGTGCCCGGGGCATTTAAATTCGAAGGGCTGGAGTTTGTGTACTAGCT
GGAGGTCCGGGAGGTGGGCAAGATCACACCCGAGCGTGGATTCTCCTCGT
TTAAGTTCCTCCCAGGTAGTCGCGATAGCATTATATTGGCGCTTAAGAGT
GTGGAGGAGGCCGCCACGGGGAAGCAGGGCTACGTGATTCACGAGGCGGC
GTGCTGGTCCCCTATAAGGAGGGAATGGATCTTCCTCCCCCGCCGGGTGT
CCTCTCTGCCCTACGACGAGGAGCTGGACGAGAAAATGGGCAGCAACAAG
ATCGTGATCGCCGACGAGACCTTCGAGAAGACGGCTCGATCCTCAACAGC
AACAATCTGTGGGTGAATGTGGTGGATGAGACGGGCACCATCGAGAGGTT
TGACTGGGGCGACAACTACGAGAAGATAAGGAAGGTGTTGGGAGCCGATG
ACCCGGACGGATAAGGGCATGAAGCTGGAATGGGCGACAGTGAAGGACGA
CAAGCTCATTCTCGGATCCTTCGGGAAGGCATATACCAGGCCAGAACACT
CTACACCGTCGACGATCGGACGGGCATCGTTTTCGAGGTCTTAGACGGCG
ATAAAAAAACGCCCCAAGTCGTGCCCAAATGGATCATCATGGAGGGCGAC
GGCATATGGAGCTGTCCGAACTCATCAGTTACAAGGG back to top
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