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Properties
| Property Name | Value |
|---|
| TranscriptId | 576712 |
| Track | FilteredModels2 |
| ProteinId | 576626 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:583827..585310 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_234 ID=mRNA_234|Name=jgi.p|Nanoce1779_2|576626|organism=Nannochloropsis oceanica|type=mRNA|length=1484bp
ACATGTACTCACGACCGACTACCATCACCCCAGACAACCAGCGTCAGACT
GCCAGCGTCAGACAGCCGGGACACTATTGGGCGATGGTTCTTCATCGCCC
AAAAAAAGTAACAACGCAGTGATATGCGGGAACATGTTGCCCTTGCTGCA
GCAACGATTCATTGCACGCTTATTGGACACAGTCCTCACTGCTTCTTCCT
CTCCTCCTCCCGAGGACACCTTTCTTTAAAATTGGGGCTGTCTGCCCATC
TGCGCCTGCTAGTCCCTCTCACCCCCATCCCCACAGCCACCCCATCAACC
ACAGGGTAGACAAGCCAAGCCTGACACTTGTCACTGTGAGATCAAATTTT
TACGACCATGTATGACCGTCTGATTCTAATCGCTGCCGTGCTGATCCCGC
TGCTGCCCTCAATTATCGTGGTTATGGCCATGTGCTTTTTCCTCCATTCC
CGACATTCCTTACGAAGGCGCAAATGTTCCGGCGAAAAAATTATTTTAGA
CGCCACCTGCAGTCAGCAGGGTCCCGATTACATCAGCGTCCACCCTGGCA
GCGCCGCCACTACCACTACCCGCCTTCATCGCGGCCGCTTCTGGCCGTTG
GAACGCAAGGGTAAAGCCAGCCTGGAAGATGTTACACTGGACGACATCAA
GGGTCTGAGCAAGGAAGAATGCTTGTGTCTATTCAGGCTTCTCCGTCCCG
CGACTTTGCAGCAGTTGCATGGCGAATGGCAAGGTGAAATATTGGCGATG
GGTCTCCTTTATCCCTTGGCGTACTTATTCTGGCATTGGCGACTGGGGCG
GGGGTGGTGGTTGGGCAAGGGCATTGATGCGGAGAGCAGGCAGGGCTACA
ACACATTTTACAATCACGGTATCACCACGCGTAATAGGCGGTTTGAAGTG
TTCATGGGCCCCAGTGCCTATGGGTGGGAAGAAGAGAAAGAAGGACAGGA
GGGAGAGACCGAGAGGCGTGTGGAAGTAGGTAGACACAAACAAAGCGAGA
TAGGCGTCGATGAGGGTGCTGGAAATGATGGAGTTCCACACGAACGGAAG
GGCAGTAGGGTTCAGCAATTTGAAAGTAGATCAGACAGATGCCACTGCGC
TGGTAGTAGTCGCATTGGTGTAGAAGAGCGGAGAGGCACTCGCAACAGGA
GCAGCACGGACCTTGCCAGTGGTGGGGAGTCGCTGCATTTAGTGTACGCG
CCGTACAACGACGGATTCTTTCATCGAATGCACGAAGAGGTGCGACGCGT
GCACGATGGTCTCTTTCTGGGCTTTGGCTCTCCCGGAGGTTTAAGGGGAA
GGACGCCTTTTAACAGCATACCGTTTCTGCTTGTCGCGCCTAAGGCCCCC
CTCAAGCAGTGGGATCAGGAGAGGAATTAAGGTGTGGACGAGTAATTAAG
ATGGAAAAGAGAGAATACACATGTATATTAAAAGGATGTACAGCGAGCGA
GAGAGTGTGCACTATCATATATCGTCATCGTCGA back to topprotein sequence of jgi.p|Nanoce1779_2|576626 >mRNA_234-protein ID=mRNA_234-protein|Name=jgi.p|Nanoce1779_2|576626|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp
MYDRLILIAAVLIPLLPSIIVVMAMCFFLHSRHSLRRRKCSGEKIILDAT
CSQQGPDYISVHPGSAATTTTRLHRGRFWPLERKGKASLEDVTLDDIKGL
SKEECLCLFRLLRPATLQQLHGEWQGEILAMGLLYPLAYLFWHWRLGRGW
WLGKGIDAESRQGYNTFYNHGITTRNRRFEVFMGPSAYGWEEEKEGQEGE
TERRVEVGRHKQSEIGVDEGAGNDGVPHERKGSRVQQFESRSDRCHCAGS
SRIGVEERRGTRNRSSTDLASGGESLHLVYAPYNDGFFHRMHEEVRRVHD
GLFLGFGSPGGLRGRTPFNSIPFLLVAPKAPLKQWDQERN* back to topmRNA from alignment at scaffold_3:583827..585310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_234 ID=mRNA_234|Name=jgi.p|Nanoce1779_2|576626|organism=Nannochloropsis oceanica|type=mRNA|length=1484bp|location=Sequence derived from alignment at scaffold_3:583827..585310- (Nannochloropsis oceanica)
ACATGTACTCACGACCGACTACCATCACCCCAGACAACCAGCGTCAGACT
GCCAGCGTCAGACAGCCGGGACACTATTGGGCGATGGTTCTTCATCGCCC
AAAAAAAGTAACAACGCAGTGATATGCGGGAACATGTTGCCCTTGCTGCA
GCAACGATTCATTGCACGCTTATTGGACACAGTCCTCACTGCTTCTTCCT
CTCCTCCTCCCGAGGACACCTTTCTTTAAAATTGGGGCTGTCTGCCCATC
TGCGCCTGCTAGTCCCTCTCACCCCCATCCCCACAGCCACCCCATCAACC
ACAGGGTAGACAAGCCAAGCCTGACACTTGTCACTGTGAGATCAAATTTT
TACGACCATGTATGACCGTCTGATTCTAATCGCTGCCGTGCTGATCCCGC
TGCTGCCCTCAATTATCGTGGTTATGGCCATGTGCTTTTTCCTCCATTCC
CGACATTCCTTACGAAGGCGCAAATGTTCCGGCGAAAAAATTATTTTAGA
CGCCACCTGCAGTCAGCAGGGTCCCGATTACATCAGCGTCCACCCTGGCA
GCGCCGCCACTACCACTACCCGCCTTCATCGCGGCCGCTTCTGGCCGTTG
GAACGCAAGGGTAAAGCCAGCCTGGAAGATGTTACACTGGACGACATCAA
GGGTCTGAGCAAGGAAGAATGCTTGTGTCTATTCAGGCTTCTCCGTCCCG
CGACTTTGCAGCAGTTGCATGGCGAATGGCAAGGTGAAATATTGGCGATG
GGTCTCCTTTATCCCTTGGCGTACTTATTCTGGCATTGGCGACTGGGGCG
GGGGTGGTGGTTGGGCAAGGGCATTGATGCGGAGAGCAGGCAGGGCTACA
ACACATTTTACAATCACGGTATCACCACGCGTAATAGGCGGTTTGAAGTG
TTCATGGGCCCCAGTGCCTATGGGTGGGAAGAAGAGAAAGAAGGACAGGA
GGGAGAGACCGAGAGGCGTGTGGAAGTAGGTAGACACAAACAAAGCGAGA
TAGGCGTCGATGAGGGTGCTGGAAATGATGGAGTTCCACACGAACGGAAG
GGCAGTAGGGTTCAGCAATTTGAAAGTAGATCAGACAGATGCCACTGCGC
TGGTAGTAGTCGCATTGGTGTAGAAGAGCGGAGAGGCACTCGCAACAGGA
GCAGCACGGACCTTGCCAGTGGTGGGGAGTCGCTGCATTTAGTGTACGCG
CCGTACAACGACGGATTCTTTCATCGAATGCACGAAGAGGTGCGACGCGT
GCACGATGGTCTCTTTCTGGGCTTTGGCTCTCCCGGAGGTTTAAGGGGAA
GGACGCCTTTTAACAGCATACCGTTTCTGCTTGTCGCGCCTAAGGCCCCC
CTCAAGCAGTGGGATCAGGAGAGGAATTAAGGTGTGGACGAGTAATTAAG
ATGGAAAAGAGAGAATACACATGTATATTAAAAGGATGTACAGCGAGCGA
GAGAGTGTGCACTATCATATATCGTCATCGTCGA back to topCoding sequence (CDS) from alignment at scaffold_3:583827..585310- >mRNA_234 ID=mRNA_234|Name=jgi.p|Nanoce1779_2|576626|organism=Nannochloropsis oceanica|type=CDS|length=1023bp|location=Sequence derived from alignment at scaffold_3:583827..585310- (Nannochloropsis oceanica)
ATGTATGACCGTCTGATTCTAATCGCTGCCGTGCTGATCCCGCTGCTGCC
CTCAATTATCGTGGTTATGGCCATGTGCTTTTTCCTCCATTCCCGACATT
CCTTACGAAGGCGCAAATGTTCCGGCGAAAAAATTATTTTAGACGCCACC
TGCAGTCAGCAGGGTCCCGATTACATCAGCGTCCACCCTGGCAGCGCCGC
CACTACCACTACCCGCCTTCATCGCGGCCGCTTCTGGCCGTTGGAACGCA
AGGGTAAAGCCAGCCTGGAAGATGTTACACTGGACGACATCAAGGGTCTG
AGCAAGGAAGAATGCTTGTGTCTATTCAGGCTTCTCCGTCCCGCGACTTT
GCAGCAGTTGCATGGCGAATGGCAAGGTGAAATATTGGCGATGGGTCTCC
TTTATCCCTTGGCGTACTTATTCTGGCATTGGCGACTGGGGCGGGGGTGG
TGGTTGGGCAAGGGCATTGATGCGGAGAGCAGGCAGGGCTACAACACATT
TTACAATCACGGTATCACCACGCGTAATAGGCGGTTTGAAGTGTTCATGG
GCCCCAGTGCCTATGGGTGGGAAGAAGAGAAAGAAGGACAGGAGGGAGAG
ACCGAGAGGCGTGTGGAAGTAGGTAGACACAAACAAAGCGAGATAGGCGT
CGATGAGGGTGCTGGAAATGATGGAGTTCCACACGAACGGAAGGGCAGTA
GGGTTCAGCAATTTGAAAGTAGATCAGACAGATGCCACTGCGCTGGTAGT
AGTCGCATTGGTGTAGAAGAGCGGAGAGGCACTCGCAACAGGAGCAGCAC
GGACCTTGCCAGTGGTGGGGAGTCGCTGCATTTAGTGTACGCGCCGTACA
ACGACGGATTCTTTCATCGAATGCACGAAGAGGTGCGACGCGTGCACGAT
GGTCTCTTTCTGGGCTTTGGCTCTCCCGGAGGTTTAAGGGGAAGGACGCC
TTTTAACAGCATACCGTTTCTGCTTGTCGCGCCTAAGGCCCCCCTCAAGC
AGTGGGATCAGGAGAGGAATTAA back to top
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