Properties
| Property Name | Value |
|---|
| TranscriptId | 326613 |
| Track | FilteredModels2 |
| ProteinId | 326527 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:88618..90143 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2337 ID=mRNA_2337|Name=jgi.p|Nanoce1779_2|326527|organism=Nannochloropsis oceanica|type=mRNA|length=826bp
TGCATTCGACGAAGCATCCGTCGACTTGGCCATGAAGAAGCGTTCGGGAG
AGAAGCTCAAGGACATGAATCCCCCCTGGCCCGCTTGTGCGACATGCAAT
AACAGACGGACACGTACATGAAGGGGGCGCAGTGTAAAGAATACGAAATG
CAGGGGGAATGCAAGCTCTTAGGAACTGGCCACAGCAGTCAAGCCTCGGG
CTCGTGACGATGACAACTGACGAGGCGTCGATTGCTCGCGAAAATTCAAT
TCGAAGAGACAATGTCAGGAAAGAGTGCACTTCAAATCCACCGGCATGAG
CATTGGACAAGGACACACAGACCACCATGCGTCCCCCGCCCCGACACTTC
CTCCTCCTTCTTCTTCTCCCGCTTTTCGCCGCTGCCTCCCCCTTCTCCCT
GACTCTCGGCCCCTCCAACCTCTCGCTCTCCCTCTCCCTGACCCCGTCAT
CCGTGGACTCGTCCTCCTTCCCGCCCTCCTTAAATGCCTCCATCACCCTA
CCTTTGAGCCACATCGGCTTTAAGTACCACGGTCGCTTCCTTTGCCCTCC
ACATGTGGACGCCGGGACGGGTGGTGTCGTCCAAGGCTCGTCCTGCATGC
TATGTCGGAAGAGCGGCAAGGGTGGGACAGGCTGGGAGAATTCGTGGCTT
GGAGCCTGGAATGGCAAGTTGAAGAAAAGCACGAGACAATCCCTGTCTTC
TTCCAGACCAACATCCGCGTGTACGTCTCCTCGCCCCTCCTCTATCTGAT
AGCCTTCGAGCAGGTCTTCCCCCAGGGCACAGAGGGGTCGGCTTCACTCT
ATGCAGACGAGGTCATCTCCTCCTTC back to topprotein sequence of jgi.p|Nanoce1779_2|326527 >mRNA_2337-protein ID=mRNA_2337-protein|Name=jgi.p|Nanoce1779_2|326527|organism=Nannochloropsis oceanica|type=polypeptide|length=141bp
MRPPPRHFLLLLLLPLFAAASPFSLTLGPSNLSLSLSLTPSSVDSSSFPP
SLNASITLPLSHIGFKYHGRFLCPPHVDAGTGGVVQGSSCMLCRKSGKGG
TGWENSWLGAWNGKLKKSTRQSLSSSRPTSACTSPRPSSI* back to topmRNA from alignment at scaffold_5:88618..90143+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2337 ID=mRNA_2337|Name=jgi.p|Nanoce1779_2|326527|organism=Nannochloropsis oceanica|type=mRNA|length=1526bp|location=Sequence derived from alignment at scaffold_5:88618..90143+ (Nannochloropsis oceanica)
TGCATTCGACGAAGCATCCGTCGACTTGGCCATGAAGAAGCGTTCGGGAG
AGAAGCTCAAGGACATGAATCCCCCCTGGCCCGCTTGTGCGACATGCAAT
AACAGACGGACACGTACATGAAGGGGGCGCAGTGTAAAGAATACGAAATG
CAGGGGGAATGCAAGCTCTTAGGAACTGGCCACAGCAGTCAAGCCTCGGG
CTCGTGACGATGACAACTGACGAGGCGTCGATTGCTCGCGAAAATTCAAT
TCGAAGAGACAATGTCAGGAAAGAGTGCACTTCAAATCCACCGGCATGAG
CATTGGACAAGGACACACAGGTTACGAGGCACAATTACCGATATATCTGT
GGGTGGATCGTTGTTGGTCTTTCTGCTGTTCCTCCGACGACTTGGACTCG
CTCTTGCTCCTCCGTCATGCCCGGCCCATGCACTATCGTCTCCTCTATTC
ATTCATTCCCACATTCACAAACACAGACCACCATGCGTCCCCCGCCCCGA
CACTTCCTCCTCCTTCTTCTTCTCCCGCTTTTCGCCGCTGCCTCCCCCTT
CTCCCTGACTCTCGGCCCCTCCAACCTCTCGCTCTCCCTCTCCCTGACCC
CGTCATCCGTGGACTCGTCCTCCTTCCCGCCCTCCTTAAATGCCTCCATC
ACCCTACCTTTGAGCCACATCGGCTTTAAGTACCACGGTCGCTTCCTTTG
CCCTCCACATGTGGACGCCGGGACGGGTGGTGTCGTCCAAGGCGGGTACG
CAGGGAGGGGAGAAGGGAGGGACCGGAGAGGGCCGCTAGAAGTGGGGGTA
TGGCTGCGACGGACACTCCTCATGCACACCCTTCATCGTTCATCATGCAG
ACACGCATAGAAAATACCACAAGCTGTAGAAGCAGCGCAGGCCCATAAGC
CCCACTCACCTCTTCTCCCTTCCTCCTTTTCCCCTTCCCCCCTCAGGCTC
GTCCTGCATGCTATGTCGGAAGAGCGGCAAGGGTGGGACAGGCTGGGAGA
ATTCGTGGCTTGGAGCCTGGAATGGCAAGTTGAAGAAAAGCACGAGGTAG
GTAGGTATAGTGATTGATCTGGAAGGAAATAGGGAGGGTCCGGTGGGGAA
TGGTTCTAGACAAGGAGGGAGGATGGGAGGGAGGAAATGAGAGATGAAGG
GAGGACCAAAGCTCCACTTACATTTCTATCCCATCACTGATTCCCTCCCT
CCCTCCCTCTCTTCCTCCCTCCCTACCTTCTTCTCTTTCTTATCTCACAC
ACAGACAATCCCTGTCTTCTTCCAGACCAACATCCGCGTGTACGTCTCCT
CGCCCCTCCTCTATCTGATAGCCTTCGAGCAGGTCTTCCCCCAGGGCACA
GAGGGGTCGGCTTCACTCTATGCAGACGAGGTGAGCCGCACCTCTTCCTT
TTCCCCCCTCCTTCCCTCTCTTGTTGTATTCCCGCCAAGTCTCGAGAAGG
GTCGAGGAAATAGCTACCAACCTTACCCTTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCAGGTCATCTCCTCCTTC back to topCoding sequence (CDS) from alignment at scaffold_5:88618..90143+ >mRNA_2337 ID=mRNA_2337|Name=jgi.p|Nanoce1779_2|326527|organism=Nannochloropsis oceanica|type=CDS|length=1269bp|location=Sequence derived from alignment at scaffold_5:88618..90143+ (Nannochloropsis oceanica)
ATGCGTCCCCCGCCCCGACACTTCCTCCTCCTTCTTCTTCTCCCGCTTTT
CGCCGCTGCCTCCCCCTTCTCCCTGACTCTCGGCCCCTCCAACCTCTCGC
TCTCCCTCTCCCTGACCCCGTCATCCGTGGACTCGTCCTCCTTCCCGCCC
TCCTTAAATGCCTCCATCACCCTACCTTTGAGCCACATCGGCTTTAAGTA
CCACGGTCGCTTCCTTTGCCCTCCACATGTGGACGCCGGGACGGGTGGTG
TCGTCCAAGGCTCGTCCTGCATGCTATGTCGGAAGAGCGGCAAGGGTGGG
ACAGGCTGGGAGAATTCGTGGCTTGGAGCCTGGAATGGCAAGTTGAAGAA
AAGCACGAGACAATCCCTGTCTTCTTCCAGACCAACATCCGCGTGTACGT
CTCCTCGCCCCTCCTCTATCTGAATGCGTCCCCCGCCCCGACACTTCCTC
CTCCTTCTTCTTCTCCCGCTTTTCGCCGCTGCCTCCCCCTTCTCCCTGAC
TCTCGGCCCCTCCAACCTCTCGCTCTCCCTCTCCCTGACCCCGTCATCCG
TGGACTCGTCCTCCTTCCCGCCCTCCTTAAATGCCTCCATCACCCTACCT
TTGAGCCACATCGGCTTTAAGTACCACGGTCGCTTCCTTTGCCCTCCACA
TGTGGACGCCGGGACGGGTGGTGTCGTCCAAGGCTCGTCCTGCATGCTAT
GTCGGAAGAGCGGCAAGGGTGGGACAGGCTGGGAGAATTCGTGGCTTGGA
GCCTGGAATGGCAAGTTGAAGAAAAGCACGAGACAATCCCTGTCTTCTTC
CAGACCAACATCCGCGTGTACGTCTCCTCGCCCCTCCTCTATCTGAATGC
GTCCCCCGCCCCGACACTTCCTCCTCCTTCTTCTTCTCCCGCTTTTCGCC
GCTGCCTCCCCCTTCTCCCTGACTCTCGGCCCCTCCAACCTCTCGCTCTC
CCTCTCCCTGACCCCGTCATCCGTGGACTCGTCCTCCTTCCCGCCCTCCT
TAAATGCCTCCATCACCCTACCTTTGAGCCACATCGGCTTTAAGTACCAC
GGTCGCTTCCTTTGCCCTCCACATGTGGACGCCGGGACGGGTGGTGTCGT
CCAAGGCTCGTCCTGCATGCTATGTCGGAAGAGCGGCAAGGGTGGGACAG
GCTGGGAGAATTCGTGGCTTGGAGCCTGGAATGGCAAGTTGAAGAAAAGC
ACGAGACAATCCCTGTCTTCTTCCAGACCAACATCCGCGTGTACGTCTCC
TCGCCCCTCCTCTATCTGA back to top
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