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Properties
| Property Name | Value |
|---|
| TranscriptId | 579837 |
| Track | FilteredModels2 |
| ProteinId | 579751 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:1281386..1282209 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2286 ID=mRNA_2286|Name=jgi.p|Nanoce1779_2|579751|organism=Nannochloropsis oceanica|type=mRNA|length=824bp
ACAAATTACAGCAAAAGAAGAGGGGTAGAAAGCGCGGGGAGGATGGGGAC
GAGGAGGAGGAAGAGGAGGGGGAGTTGGATGAGGTGGAGAGGGAGAGGAC
GAAGTTGTGGATTGAGATGGGGGCGAGAAAAGTCTTAGATGAGTGGCCTA
TGCTTCGGCAGGAAACGAAACTTTTGTCGATGATGCAGAGGGTAGTTGGA
GGTGGAGGAGGAGGAGTAGGAGAAAGGGGGGGAGGGAGGGGGGATACACG
GCAACGCCCCGGCCAGAACGGCAGGGCGTGCAGCAGTAGTAGTGGCATGC
AGGTTACTCACATCGATAAGGGGGGACCTGGAGGACAGCTCCGCATTCGG
CAAGAAGAACTTCGAGCTCGTGTGTTTCAGCCAGGCTACAGCCTTCCAAC
TGTCTCTCTTGAGGAGTTCGCGGCTCAAGAAGTTGCAGCAGCGGAAGAAC
GAGAGGCCAAGACAAAGCTAGCGGCGGAGGCACCAGCAGGTCCAAGAAGG
TACAAGCAATTGGAGGAGGAAGGGAAGGAGGACGAGGCGGAGCTGGTGGA
GCAGGCAGCGTTCCATGACCGCGCCTGGGATGACTGGAAGGATGCCAACC
CGCGGGGGAGTGGGAATAAGATGGGGAAGCGATTTTGAGTTGGGAAAAAG
TAAAAGTCAGGACAAAGACGAAAAAAAGGGACAGTGCTGTAATATCTTGT
GCGTTCTTATCAATATATAGCTAGCGCTGGGGTTCCTTGGTTAATTTACA
AACAATCCACGGTGCATGAGGCGAGAGAAAAGGGAGAAAAGAGGAAAAAG
GGAGGTTTTCTAGCACGGCTTTGC back to topprotein sequence of jgi.p|Nanoce1779_2|579751 >mRNA_2286-protein ID=mRNA_2286-protein|Name=jgi.p|Nanoce1779_2|579751|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MGARKVLDEWPMLRQETKLLSMMQRVVGGGGGGVGERGGGRGDTRQRPGQ
NGRACSSSSGMQVTHIDKGGPGGQLRIRQEELRARVFQPGYSLPTVSLEE
FAAQEVAAAEEREAKTKLAAEAPAGPRRYKQLEEEGKEDEAELVEQAAFH
DRAWDDWKDANPRGSGNKMGKRF* back to topmRNA from alignment at scaffold_4:1281386..1282209+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2286 ID=mRNA_2286|Name=jgi.p|Nanoce1779_2|579751|organism=Nannochloropsis oceanica|type=mRNA|length=824bp|location=Sequence derived from alignment at scaffold_4:1281386..1282209+ (Nannochloropsis oceanica)
ACAAATTACAGCAAAAGAAGAGGGGTAGAAAGCGCGGGGAGGATGGGGAC
GAGGAGGAGGAAGAGGAGGGGGAGTTGGATGAGGTGGAGAGGGAGAGGAC
GAAGTTGTGGATTGAGATGGGGGCGAGAAAAGTCTTAGATGAGTGGCCTA
TGCTTCGGCAGGAAACGAAACTTTTGTCGATGATGCAGAGGGTAGTTGGA
GGTGGAGGAGGAGGAGTAGGAGAAAGGGGGGGAGGGAGGGGGGATACACG
GCAACGCCCCGGCCAGAACGGCAGGGCGTGCAGCAGTAGTAGTGGCATGC
AGGTTACTCACATCGATAAGGGGGGACCTGGAGGACAGCTCCGCATTCGG
CAAGAAGAACTTCGAGCTCGTGTGTTTCAGCCAGGCTACAGCCTTCCAAC
TGTCTCTCTTGAGGAGTTCGCGGCTCAAGAAGTTGCAGCAGCGGAAGAAC
GAGAGGCCAAGACAAAGCTAGCGGCGGAGGCACCAGCAGGTCCAAGAAGG
TACAAGCAATTGGAGGAGGAAGGGAAGGAGGACGAGGCGGAGCTGGTGGA
GCAGGCAGCGTTCCATGACCGCGCCTGGGATGACTGGAAGGATGCCAACC
CGCGGGGGAGTGGGAATAAGATGGGGAAGCGATTTTGAGTTGGGAAAAAG
TAAAAGTCAGGACAAAGACGAAAAAAAGGGACAGTGCTGTAATATCTTGT
GCGTTCTTATCAATATATAGCTAGCGCTGGGGTTCCTTGGTTAATTTACA
AACAATCCACGGTGCATGAGGCGAGAGAAAAGGGAGAAAAGAGGAAAAAG
GGAGGTTTTCTAGCACGGCTTTGC back to topCoding sequence (CDS) from alignment at scaffold_4:1281386..1282209+ >mRNA_2286 ID=mRNA_2286|Name=jgi.p|Nanoce1779_2|579751|organism=Nannochloropsis oceanica|type=CDS|length=522bp|location=Sequence derived from alignment at scaffold_4:1281386..1282209+ (Nannochloropsis oceanica)
ATGGGGGCGAGAAAAGTCTTAGATGAGTGGCCTATGCTTCGGCAGGAAAC
GAAACTTTTGTCGATGATGCAGAGGGTAGTTGGAGGTGGAGGAGGAGGAG
TAGGAGAAAGGGGGGGAGGGAGGGGGGATACACGGCAACGCCCCGGCCAG
AACGGCAGGGCGTGCAGCAGTAGTAGTGGCATGCAGGTTACTCACATCGA
TAAGGGGGGACCTGGAGGACAGCTCCGCATTCGGCAAGAAGAACTTCGAG
CTCGTGTGTTTCAGCCAGGCTACAGCCTTCCAACTGTCTCTCTTGAGGAG
TTCGCGGCTCAAGAAGTTGCAGCAGCGGAAGAACGAGAGGCCAAGACAAA
GCTAGCGGCGGAGGCACCAGCAGGTCCAAGAAGGTACAAGCAATTGGAGG
AGGAAGGGAAGGAGGACGAGGCGGAGCTGGTGGAGCAGGCAGCGTTCCAT
GACCGCGCCTGGGATGACTGGAAGGATGCCAACCCGCGGGGGAGTGGGAA
TAAGATGGGGAAGCGATTTTGA back to top
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