Properties
| Property Name | Value |
|---|
| TranscriptId | 299218 |
| Track | FilteredModels2 |
| ProteinId | 299132 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:1273675..1275119 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2284 ID=mRNA_2284|Name=jgi.p|Nanoce1779_2|299132|organism=Nannochloropsis oceanica|type=mRNA|length=1318bp
AGCGCACCCGAATGCTCAAAGCACGAGAGAACTTCCAAAGGCTTTTGAGT
GAGGAATTAGAGAGGGCCAGGGCACGCGAAAAGCCCGCGAGTGCCTGGGC
ATATATTCAGTTGTTTTATGCCACCTACACAAAGGTCTCGAAGGAAGTCT
TTGGCAGCCGTGACGACATCGTTGGGATGGCCGCGAGGAGGGCAGAGCAT
CACTAGCACGCGTGCAGCAGCAGTCACAGCAAGGCCTGTCGTTTTCCTTG
TCCAATTTGTTGTATCATTTCACGTTAGCGTCCAAGGGAGCACGGATGGG
GAGAAGGCAGCTGGTTGTTGCCGGCATTTTGGGTTCCGTGGTTGAGATAG
GGATGAGAAACATCGTCCCTCTTCCGGGGATTGAGCCTGTGACCCTCCCT
CAATCGGTGCTTCACCCTTCCTCGTTGTTGAGTGTGCTGGGTGGGTGTGC
GATCCAGACGGGCTTGACGTATGGCTTGTTGCAGATTGTAGAGGGGGAGG
GAGGGAAAAAGGGCGGGACCGAAGGTGTGATCAGGGAGGAGGAGAACGGA
AAGGAGGTCAAGATGGCAGATCCTCTTGGCTCACTCATGTTTCTGTCTCA
GTTGGTGGAGACGGCGGTTGGGTGTGTGGTCACAGTCAAAGGCCGTCCGT
TTTCCACCGGGATTTTGGATAGCCATTCGCTGGTTTTTGCGCTGGTGGGG
CTCTTCCTCGTCCCCCTTCTCGTTGCCCTTGAAGTGGACACGGGGAGGAT
AAACCGACGTTTGGAGGTGGAGCGGTGGGGAGAGGGAGGGAGGGAGAGCT
GGAGGAGGAGGACGGGGATTGCGTGTAATTTACTCGGACAGTTTGTGTTG
CCGGTGGCTTGGAACGCCGCGATGCTGCAAGTGTTTGCTCCCGAGGTGGG
CAGGGCGAGGAGGAGGGCGGGAGGGGAGGCCAGGGAGGGATGGAAGAAGG
TTGGGATGGCGTTGATCGCTTGGGCTGCGATTTTGGGGGGGTTGGTGCCG
TGGGAAGGGGTAGTGGCGACCCTAAGCATGGACCCAGCCGAAATGATGAT
GAATTTAGCGACTGCGGGAGGAGGGGAGGAGGAGGAGGGAGAGGGGGAAG
AGGAGGAGAGGTCGTTAGAGGTTGAAAAAGAGGGTCCATGAAGCATATCA
AGGAGTCTGAAGAGAAAAATAAGGGAAAAGAGGAGATGAAAAAGGTTTTG
ACGTGATGATCCAGTAACAAAAAGAAAAAGCACACACGCAATACTAAAAG
GGAAAGCTTTTGACTCGCCCGGAGAGGAGATAAAGTTTTGACGTAAAATG
AAATTTAAGAAGCGTGGC back to topprotein sequence of jgi.p|Nanoce1779_2|299132 >mRNA_2284-protein ID=mRNA_2284-protein|Name=jgi.p|Nanoce1779_2|299132|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MGRRQLVVAGILGSVVEIGMRNIVPLPGIEPVTLPQSVLHPSSLLSVLGG
CAIQTGLTYGLLQIVEGEGGKKGGTEGVIREEENGKEVKMADPLGSLMFL
SQLVETAVGCVVTVKGRPFSTGILDSHSLVFALVGLFLVPLLVALEVDTG
RINRRLEVERWGEGGRESWRRRTGIACNLLGQFVLPVAWNAAMLQVFAPE
VGRARRRAGGEAREGWKKVGMALIAWAAILGGLVPWEGVVATLSMDPAEM
MMNLATAGGGEEEEGEGEEEERSLEVEKEGP* back to topmRNA from alignment at scaffold_4:1273675..1275119+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2284 ID=mRNA_2284|Name=jgi.p|Nanoce1779_2|299132|organism=Nannochloropsis oceanica|type=mRNA|length=1445bp|location=Sequence derived from alignment at scaffold_4:1273675..1275119+ (Nannochloropsis oceanica)
AGCGCACCCGAATGCTCAAAGCACGAGAGAACTTCCAAAGGCTTTTGAGT
GAGGAATTAGAGAGGGCCAGGGCACGCGAAAAGCCCGCGAGTGCCTGGGC
ATATATTCAGTTGTTTTATGCCACCTACACAAAGGTCTCGAAGGAAGTCT
TTGGCAGCCGTGACGACATCGTTGGGATGGCCGCGAGGAGGTGGGAGGGC
GAGGGGGAGGGCGAGGGGGGGGAAGGGCTGGAGTTGAAGTTAGGGGATGC
GTCTCTGGCAGCTCCGTTTACGAGCAAGAATCCTTCTATCATGTGTGTTA
CTGAACTTATCCGACAGGGCAGAGCATCACTAGCACGCGTGCAGCAGCAG
TCACAGCAAGGCCTGTCGTTTTCCTTGTCCAATTTGTTGTATCATTTCAC
GTTAGCGTCCAAGGGAGCACGGATGGGGAGAAGGCAGCTGGTTGTTGCCG
GCATTTTGGGTTCCGTGGTTGAGATAGGGATGAGAAACATCGTCCCTCTT
CCGGGGATTGAGCCTGTGACCCTCCCTCAATCGGTGCTTCACCCTTCCTC
GTTGTTGAGTGTGCTGGGTGGGTGTGCGATCCAGACGGGCTTGACGTATG
GCTTGTTGCAGATTGTAGAGGGGGAGGGAGGGAAAAAGGGCGGGACCGAA
GGTGTGATCAGGGAGGAGGAGAACGGAAAGGAGGTCAAGATGGCAGATCC
TCTTGGCTCACTCATGTTTCTGTCTCAGTTGGTGGAGACGGCGGTTGGGT
GTGTGGTCACAGTCAAAGGCCGTCCGTTTTCCACCGGGATTTTGGATAGC
CATTCGCTGGTTTTTGCGCTGGTGGGGCTCTTCCTCGTCCCCCTTCTCGT
TGCCCTTGAAGTGGACACGGGGAGGATAAACCGACGTTTGGAGGTGGAGC
GGTGGGGAGAGGGAGGGAGGGAGAGCTGGAGGAGGAGGACGGGGATTGCG
TGTAATTTACTCGGACAGTTTGTGTTGCCGGTGGCTTGGAACGCCGCGAT
GCTGCAAGTGTTTGCTCCCGAGGTGGGCAGGGCGAGGAGGAGGGCGGGAG
GGGAGGCCAGGGAGGGATGGAAGAAGGTTGGGATGGCGTTGATCGCTTGG
GCTGCGATTTTGGGGGGGTTGGTGCCGTGGGAAGGGGTAGTGGCGACCCT
AAGCATGGACCCAGCCGAAATGATGATGAATTTAGCGACTGCGGGAGGAG
GGGAGGAGGAGGAGGGAGAGGGGGAAGAGGAGGAGAGGTCGTTAGAGGTT
GAAAAAGAGGGTCCATGAAGCATATCAAGGAGTCTGAAGAGAAAAATAAG
GGAAAAGAGGAGATGAAAAAGGTTTTGACGTGATGATCCAGTAACAAAAA
GAAAAAGCACACACGCAATACTAAAAGGGAAAGCTTTTGACTCGCCCGGA
GAGGAGATAAAGTTTTGACGTAAAATGAAATTTAAGAAGCGTGGC back to topCoding sequence (CDS) from alignment at scaffold_4:1273675..1275119+ >mRNA_2284 ID=mRNA_2284|Name=jgi.p|Nanoce1779_2|299132|organism=Nannochloropsis oceanica|type=CDS|length=846bp|location=Sequence derived from alignment at scaffold_4:1273675..1275119+ (Nannochloropsis oceanica)
ATGGGGAGAAGGCAGCTGGTTGTTGCCGGCATTTTGGGTTCCGTGGTTGA
GATAGGGATGAGAAACATCGTCCCTCTTCCGGGGATTGAGCCTGTGACCC
TCCCTCAATCGGTGCTTCACCCTTCCTCGTTGTTGAGTGTGCTGGGTGGG
TGTGCGATCCAGACGGGCTTGACGTATGGCTTGTTGCAGATTGTAGAGGG
GGAGGGAGGGAAAAAGGGCGGGACCGAAGGTGTGATCAGGGAGGAGGAGA
ACGGAAAGGAGGTCAAGATGGCAGATCCTCTTGGCTCACTCATGTTTCTG
TCTCAGTTGGTGGAGACGGCGGTTGGGTGTGTGGTCACAGTCAAAGGCCG
TCCGTTTTCCACCGGGATTTTGGATAGCCATTCGCTGGTTTTTGCGCTGG
TGGGGCTCTTCCTCGTCCCCCTTCTCGTTGCCCTTGAAGTGGACACGGGG
AGGATAAACCGACGTTTGGAGGTGGAGCGGTGGGGAGAGGGAGGGAGGGA
GAGCTGGAGGAGGAGGACGGGGATTGCGTGTAATTTACTCGGACAGTTTG
TGTTGCCGGTGGCTTGGAACGCCGCGATGCTGCAAGTGTTTGCTCCCGAG
GTGGGCAGGGCGAGGAGGAGGGCGGGAGGGGAGGCCAGGGAGGGATGGAA
GAAGGTTGGGATGGCGTTGATCGCTTGGGCTGCGATTTTGGGGGGGTTGG
TGCCGTGGGAAGGGGTAGTGGCGACCCTAAGCATGGACCCAGCCGAAATG
ATGATGAATTTAGCGACTGCGGGAGGAGGGGAGGAGGAGGAGGGAGAGGG
GGAAGAGGAGGAGAGGTCGTTAGAGGTTGAAAAAGAGGGTCCATGA back to top
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