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Properties
| Property Name | Value |
|---|
| TranscriptId | 299067 |
| Track | FilteredModels2 |
| ProteinId | 298981 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:1266627..1267963 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2281 ID=mRNA_2281|Name=jgi.p|Nanoce1779_2|298981|organism=Nannochloropsis oceanica|type=mRNA|length=1337bp
CAGTTGACCGCTGAGGCCATCTATGATTTTTCCGAAGTCCCACTAGCAAC
AGCAGTAACAGCGGAAGAAGAACAAGTCGGGACCCGCTCCCACTCCTTCT
CCGAAGGCGCCAAGCTGAACGAAGGCGGCAACCTCCTCCCCTCACCTTCC
TTCCCGCCCTCCCTCCCTCCCTTGTACACCGGGGGGCGTTCTCCTTCTGA
TTTGTTTTACTCGGAGCACGTAAATGACATCCACGCGCTTTTGGGAAAAG
CGGGTGCAGACTCCTATGTGGAGAGGATGGACCTTGAAGATTATTTGTTC
CGCTTTGACAGGGGAGTGTTTTGGTTCGCCCAGGTGAGCGTTATGTCATG
ATATGTTGGTGGAGAGAGGGAAGGAGGGAAGAATTGGGATGAAGAGAGGG
AGGGAGGAAGGGAAGAGTTGGCTCCATGGTGTTTTTTGGGAAGCAATCGC
GTTGTCTTCATTCAACGTCATTCTCACCTTCCCTCCTTCCCTCCCTTCCC
CCCTTCCTCCCGGCTTTGCTTCGCAGTCTGCAGCCGCCTCCATCGCCACG
ATTCCCTTCCTGCAGGGCTGGCTGTTTCCCCTTGCCTCTCGCTCCCTTTT
CTCCCGCTTCTGTTGGCGTTGGCTCTTTACCTCCTCCTCCCTCTTCTCTC
TTCTCCACGCCGCCACCCCCGACCTCCTTTCTTCCCGCCTCCTCCTCCTC
GCTCCCTCCCTCCCCCTCTCCCATGCCGCTTCATTCCTCCCCTTCCTCCA
CACCACCCTCCCTCTCCCTCCCCCCGCCCCCCTCTACCTCCTCCCTATCC
GGGGTGCTGCCGTTCGCCAGCCTTTCGCGCCGCAGGGTCACATTCACACG
TTATTTCTCTCTGTCTTAATCCATGGTCGATTGACGCACGGGGCTGCCGA
AGGACACACGAGGAGGGTGGAGGGGTGGCTGGGGAGGAAGGGAGGGAGGA
AGGGGTTGTGTGCGATGAATTTCTACGACAAGAGGATGTTTTGGAGTGGC
TTCCCGCTGTATGATTGGAGAGAATATTTGTATTTGAGAGGGAAGTACGC
GGCTGATGGTATATTTCCCTCGCTGGAGGAGAAGGTGTGCTGGGAGGGCC
AGGAGGGGGAACGGGAGAGATGGAGGAAGGGAGGTGGGGAGGATGGAAAG
GGATGGGTGAGGAGGTATCTGGAAGGGCGGAGGAGGAAGTTCGTAGGGAT
CTTATTGTAGGGAGAGCGAGGGGGGTAAGGAGGGAGGGGAGGAAGGAGGT
GTAGCAGTTTGGAGGGAGAGATTGGAGAATAGTTAAAGCATCAAAACAGA
AACAACATAGGACTCGTTAGAGCGAAAAGCAGCAATG back to topprotein sequence of jgi.p|Nanoce1779_2|298981 >mRNA_2281-protein ID=mRNA_2281-protein|Name=jgi.p|Nanoce1779_2|298981|organism=Nannochloropsis oceanica|type=polypeptide|length=286bp
MLVERGKEGRIGMKRGREEGKSWLHGVFWEAIALSSFNVILTFPPSLPSP
LPPGFASQSAAASIATIPFLQGWLFPLASRSLFSRFCWRWLFTSSSLFSL
LHAATPDLLSSRLLLLAPSLPLSHAASFLPFLHTTLPLPPPAPLYLLPIR
GAAVRQPFAPQGHIHTLFLSVLIHGRLTHGAAEGHTRRVEGWLGRKGGRK
GLCAMNFYDKRMFWSGFPLYDWREYLYLRGKYAADGIFPSLEEKVCWEGQ
EGERERWRKGGGEDGKGWVRRYLEGRRRKFVGILL* back to topmRNA from alignment at scaffold_4:1266627..1267963- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2281 ID=mRNA_2281|Name=jgi.p|Nanoce1779_2|298981|organism=Nannochloropsis oceanica|type=mRNA|length=1337bp|location=Sequence derived from alignment at scaffold_4:1266627..1267963- (Nannochloropsis oceanica)
CAGTTGACCGCTGAGGCCATCTATGATTTTTCCGAAGTCCCACTAGCAAC
AGCAGTAACAGCGGAAGAAGAACAAGTCGGGACCCGCTCCCACTCCTTCT
CCGAAGGCGCCAAGCTGAACGAAGGCGGCAACCTCCTCCCCTCACCTTCC
TTCCCGCCCTCCCTCCCTCCCTTGTACACCGGGGGGCGTTCTCCTTCTGA
TTTGTTTTACTCGGAGCACGTAAATGACATCCACGCGCTTTTGGGAAAAG
CGGGTGCAGACTCCTATGTGGAGAGGATGGACCTTGAAGATTATTTGTTC
CGCTTTGACAGGGGAGTGTTTTGGTTCGCCCAGGTGAGCGTTATGTCATG
ATATGTTGGTGGAGAGAGGGAAGGAGGGAAGAATTGGGATGAAGAGAGGG
AGGGAGGAAGGGAAGAGTTGGCTCCATGGTGTTTTTTGGGAAGCAATCGC
GTTGTCTTCATTCAACGTCATTCTCACCTTCCCTCCTTCCCTCCCTTCCC
CCCTTCCTCCCGGCTTTGCTTCGCAGTCTGCAGCCGCCTCCATCGCCACG
ATTCCCTTCCTGCAGGGCTGGCTGTTTCCCCTTGCCTCTCGCTCCCTTTT
CTCCCGCTTCTGTTGGCGTTGGCTCTTTACCTCCTCCTCCCTCTTCTCTC
TTCTCCACGCCGCCACCCCCGACCTCCTTTCTTCCCGCCTCCTCCTCCTC
GCTCCCTCCCTCCCCCTCTCCCATGCCGCTTCATTCCTCCCCTTCCTCCA
CACCACCCTCCCTCTCCCTCCCCCCGCCCCCCTCTACCTCCTCCCTATCC
GGGGTGCTGCCGTTCGCCAGCCTTTCGCGCCGCAGGGTCACATTCACACG
TTATTTCTCTCTGTCTTAATCCATGGTCGATTGACGCACGGGGCTGCCGA
AGGACACACGAGGAGGGTGGAGGGGTGGCTGGGGAGGAAGGGAGGGAGGA
AGGGGTTGTGTGCGATGAATTTCTACGACAAGAGGATGTTTTGGAGTGGC
TTCCCGCTGTATGATTGGAGAGAATATTTGTATTTGAGAGGGAAGTACGC
GGCTGATGGTATATTTCCCTCGCTGGAGGAGAAGGTGTGCTGGGAGGGCC
AGGAGGGGGAACGGGAGAGATGGAGGAAGGGAGGTGGGGAGGATGGAAAG
GGATGGGTGAGGAGGTATCTGGAAGGGCGGAGGAGGAAGTTCGTAGGGAT
CTTATTGTAGGGAGAGCGAGGGGGGTAAGGAGGGAGGGGAGGAAGGAGGT
GTAGCAGTTTGGAGGGAGAGATTGGAGAATAGTTAAAGCATCAAAACAGA
AACAACATAGGACTCGTTAGAGCGAAAAGCAGCAATG back to topCoding sequence (CDS) from alignment at scaffold_4:1266627..1267963- >mRNA_2281 ID=mRNA_2281|Name=jgi.p|Nanoce1779_2|298981|organism=Nannochloropsis oceanica|type=CDS|length=858bp|location=Sequence derived from alignment at scaffold_4:1266627..1267963- (Nannochloropsis oceanica)
ATGTTGGTGGAGAGAGGGAAGGAGGGAAGAATTGGGATGAAGAGAGGGAG
GGAGGAAGGGAAGAGTTGGCTCCATGGTGTTTTTTGGGAAGCAATCGCGT
TGTCTTCATTCAACGTCATTCTCACCTTCCCTCCTTCCCTCCCTTCCCCC
CTTCCTCCCGGCTTTGCTTCGCAGTCTGCAGCCGCCTCCATCGCCACGAT
TCCCTTCCTGCAGGGCTGGCTGTTTCCCCTTGCCTCTCGCTCCCTTTTCT
CCCGCTTCTGTTGGCGTTGGCTCTTTACCTCCTCCTCCCTCTTCTCTCTT
CTCCACGCCGCCACCCCCGACCTCCTTTCTTCCCGCCTCCTCCTCCTCGC
TCCCTCCCTCCCCCTCTCCCATGCCGCTTCATTCCTCCCCTTCCTCCACA
CCACCCTCCCTCTCCCTCCCCCCGCCCCCCTCTACCTCCTCCCTATCCGG
GGTGCTGCCGTTCGCCAGCCTTTCGCGCCGCAGGGTCACATTCACACGTT
ATTTCTCTCTGTCTTAATCCATGGTCGATTGACGCACGGGGCTGCCGAAG
GACACACGAGGAGGGTGGAGGGGTGGCTGGGGAGGAAGGGAGGGAGGAAG
GGGTTGTGTGCGATGAATTTCTACGACAAGAGGATGTTTTGGAGTGGCTT
CCCGCTGTATGATTGGAGAGAATATTTGTATTTGAGAGGGAAGTACGCGG
CTGATGGTATATTTCCCTCGCTGGAGGAGAAGGTGTGCTGGGAGGGCCAG
GAGGGGGAACGGGAGAGATGGAGGAAGGGAGGTGGGGAGGATGGAAAGGG
ATGGGTGAGGAGGTATCTGGAAGGGCGGAGGAGGAAGTTCGTAGGGATCT
TATTGTAG back to top
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