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Properties
| Property Name | Value |
|---|
| TranscriptId | 298316 |
| Track | FilteredModels2 |
| ProteinId | 298230 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:1193501..1194801 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2258 ID=mRNA_2258|Name=jgi.p|Nanoce1779_2|298230|organism=Nannochloropsis oceanica|type=mRNA|length=1301bp
GTGACGACGAACAAAGCGCGATTTTTAACGGTGTGCTCTGTCTCGCGCAA
AACAAGGCAAATACATAGGTATGCGCACAACGCACAACACCGACAACACT
GTTTCCTTTCCATGCCACATATGCACAGGGACTTTCACCTTGCGACACTT
CGGATCGTCTCCCTCCCTCCTTCTGTCCTTATCCTCCCTCTCCTTGACCA
GCAAGCAGCATTAGCAGCATCACCATTCCGCCCCGCAGCACACCTAAGCC
GCACCTACAGAGCTACACACCCAAGAGCAAAGCATAAAGCATGGGTGCCC
TCGCCGGATTCATCAACGCCCCCGTCACCAAAGGCTACTGCCTCTTGGTG
GTGGGCGCCTCCCTCCTTTCCTCCTACACCCAATCCGGCCCAGCTCTCAC
TCTAGACCTCGCCCGCATTCTCCGCAAGGGGGAAATCTGGCGTCTGCTCA
CCAGTCAACTAGCCTTCCAAGAACATCCACAAACCGTGCTCGGAACATTT
TTACTATACACCTTTCGGCATTTTGAACGGCAGATGGGCTCGAGGAAATT
TGGGTCTTTTTTAGTCCTTTCCACCTTGCTAGCTACCTCGGCCGAAGCTG
CCATCGCTGCCTGGGTGGGTCCAAGTGGAGGCGGTAAAGGAGGCAGGAAT
GGATTGGTGCTGGCATCAGGGCCGTTCGGGGCGATGTACGCGATGTTTGT
CCTGTTTTATACGACTGTGCCGAAGCTGAATCCAAAGTTGGTAGGGGTTT
TCGGGGTGGACATAAGTGACAAAAGCATGTACTACGCGGTGGGGGCGCAG
CTGCTGCTGGGGGGTGGGTGGGCGACAGCAATCCCGGCTTTGTGTGGTTT
AATGGCGGGGATGTTGTACAGAAGAAATGTGCTGGGGATTCAGAAGGTGA
TGCTTCCGGGGGTTGTGTGTAGGTGTCTTGCATCCATGCTTAGCCCGGTA
CTGCAGACGGGGCGGCCGATCCCGGGGGCGGAGAGGCGAAGGCGGGGAGG
AGGGGGAGGAGGAGGAGGGCCAGGTGGGAGGGAGCAGCTGTTGCCGGGTG
CGGGGGGCCCGAGGTATCAGCCAGGACAACCAAGAAGGGGGGGAGGGAGA
CACCAACCAGTAGGAGGAGCTGCAGGAGCAGGAGTAGCGGTCCCGCTTGC
TGGCATTCCACCGCCGGCGCCGGCATCGGAGGAGGCGATTGAGATGTTGA
TGGGTTTGGGATTCGAGAGAGGGGCGGTGGTGAGGGCATTGCAGGCTGCG
GACAACAATGTAGAGGTGGCGGCCAATCGGTTGCTGGCGGGGGGATGAAG
G back to topprotein sequence of jgi.p|Nanoce1779_2|298230 >mRNA_2258-protein ID=mRNA_2258-protein|Name=jgi.p|Nanoce1779_2|298230|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MGALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIW
RLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATS
AEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKL
VGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGI
QKVMLPGVVCRCLASMLSPVLQTGRPIPGAERRRRGGGGGGGGPGGREQL
LPGAGGPRYQPGQPRRGGGRHQPVGGAAGAGVAVPLAGIPPPAPASEEAI
EMLMGLGFERGAVVRALQAADNNVEVAANRLLAGG* back to topmRNA from alignment at scaffold_4:1193501..1194801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2258 ID=mRNA_2258|Name=jgi.p|Nanoce1779_2|298230|organism=Nannochloropsis oceanica|type=mRNA|length=1301bp|location=Sequence derived from alignment at scaffold_4:1193501..1194801- (Nannochloropsis oceanica)
GTGACGACGAACAAAGCGCGATTTTTAACGGTGTGCTCTGTCTCGCGCAA
AACAAGGCAAATACATAGGTATGCGCACAACGCACAACACCGACAACACT
GTTTCCTTTCCATGCCACATATGCACAGGGACTTTCACCTTGCGACACTT
CGGATCGTCTCCCTCCCTCCTTCTGTCCTTATCCTCCCTCTCCTTGACCA
GCAAGCAGCATTAGCAGCATCACCATTCCGCCCCGCAGCACACCTAAGCC
GCACCTACAGAGCTACACACCCAAGAGCAAAGCATAAAGCATGGGTGCCC
TCGCCGGATTCATCAACGCCCCCGTCACCAAAGGCTACTGCCTCTTGGTG
GTGGGCGCCTCCCTCCTTTCCTCCTACACCCAATCCGGCCCAGCTCTCAC
TCTAGACCTCGCCCGCATTCTCCGCAAGGGGGAAATCTGGCGTCTGCTCA
CCAGTCAACTAGCCTTCCAAGAACATCCACAAACCGTGCTCGGAACATTT
TTACTATACACCTTTCGGCATTTTGAACGGCAGATGGGCTCGAGGAAATT
TGGGTCTTTTTTAGTCCTTTCCACCTTGCTAGCTACCTCGGCCGAAGCTG
CCATCGCTGCCTGGGTGGGTCCAAGTGGAGGCGGTAAAGGAGGCAGGAAT
GGATTGGTGCTGGCATCAGGGCCGTTCGGGGCGATGTACGCGATGTTTGT
CCTGTTTTATACGACTGTGCCGAAGCTGAATCCAAAGTTGGTAGGGGTTT
TCGGGGTGGACATAAGTGACAAAAGCATGTACTACGCGGTGGGGGCGCAG
CTGCTGCTGGGGGGTGGGTGGGCGACAGCAATCCCGGCTTTGTGTGGTTT
AATGGCGGGGATGTTGTACAGAAGAAATGTGCTGGGGATTCAGAAGGTGA
TGCTTCCGGGGGTTGTGTGTAGGTGTCTTGCATCCATGCTTAGCCCGGTA
CTGCAGACGGGGCGGCCGATCCCGGGGGCGGAGAGGCGAAGGCGGGGAGG
AGGGGGAGGAGGAGGAGGGCCAGGTGGGAGGGAGCAGCTGTTGCCGGGTG
CGGGGGGCCCGAGGTATCAGCCAGGACAACCAAGAAGGGGGGGAGGGAGA
CACCAACCAGTAGGAGGAGCTGCAGGAGCAGGAGTAGCGGTCCCGCTTGC
TGGCATTCCACCGCCGGCGCCGGCATCGGAGGAGGCGATTGAGATGTTGA
TGGGTTTGGGATTCGAGAGAGGGGCGGTGGTGAGGGCATTGCAGGCTGCG
GACAACAATGTAGAGGTGGCGGCCAATCGGTTGCTGGCGGGGGGATGAAG
G back to topCoding sequence (CDS) from alignment at scaffold_4:1193501..1194801- >mRNA_2258 ID=mRNA_2258|Name=jgi.p|Nanoce1779_2|298230|organism=Nannochloropsis oceanica|type=CDS|length=1008bp|location=Sequence derived from alignment at scaffold_4:1193501..1194801- (Nannochloropsis oceanica)
ATGGGTGCCCTCGCCGGATTCATCAACGCCCCCGTCACCAAAGGCTACTG
CCTCTTGGTGGTGGGCGCCTCCCTCCTTTCCTCCTACACCCAATCCGGCC
CAGCTCTCACTCTAGACCTCGCCCGCATTCTCCGCAAGGGGGAAATCTGG
CGTCTGCTCACCAGTCAACTAGCCTTCCAAGAACATCCACAAACCGTGCT
CGGAACATTTTTACTATACACCTTTCGGCATTTTGAACGGCAGATGGGCT
CGAGGAAATTTGGGTCTTTTTTAGTCCTTTCCACCTTGCTAGCTACCTCG
GCCGAAGCTGCCATCGCTGCCTGGGTGGGTCCAAGTGGAGGCGGTAAAGG
AGGCAGGAATGGATTGGTGCTGGCATCAGGGCCGTTCGGGGCGATGTACG
CGATGTTTGTCCTGTTTTATACGACTGTGCCGAAGCTGAATCCAAAGTTG
GTAGGGGTTTTCGGGGTGGACATAAGTGACAAAAGCATGTACTACGCGGT
GGGGGCGCAGCTGCTGCTGGGGGGTGGGTGGGCGACAGCAATCCCGGCTT
TGTGTGGTTTAATGGCGGGGATGTTGTACAGAAGAAATGTGCTGGGGATT
CAGAAGGTGATGCTTCCGGGGGTTGTGTGTAGGTGTCTTGCATCCATGCT
TAGCCCGGTACTGCAGACGGGGCGGCCGATCCCGGGGGCGGAGAGGCGAA
GGCGGGGAGGAGGGGGAGGAGGAGGAGGGCCAGGTGGGAGGGAGCAGCTG
TTGCCGGGTGCGGGGGGCCCGAGGTATCAGCCAGGACAACCAAGAAGGGG
GGGAGGGAGACACCAACCAGTAGGAGGAGCTGCAGGAGCAGGAGTAGCGG
TCCCGCTTGCTGGCATTCCACCGCCGGCGCCGGCATCGGAGGAGGCGATT
GAGATGTTGATGGGTTTGGGATTCGAGAGAGGGGCGGTGGTGAGGGCATT
GCAGGCTGCGGACAACAATGTAGAGGTGGCGGCCAATCGGTTGCTGGCGG
GGGGATGA back to top
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