Properties
Property Name | Value |
TranscriptId | 668996 |
Track | FilteredModels2 |
ProteinId | 668910 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_4 | supercontig | scaffold_4:1152130..1155069 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2241 ID=mRNA_2241|Name=jgi.p|Nanoce1779_2|668910|organism=Nannochloropsis oceanica|type=mRNA|length=2834bp GAGGACGACCAACGGAGACGCACTGCAAGTTTTGGAGAGTTGTGTGTCCA AGTCAAGGCTTACAAGGCTAGATCTGCACTATACACTGCTGCGGCATCGG CATTGGCGCGCTCGCCGAAGTTATAAACGTTCGTTACAGAGGAAGAGGTC GATCGATCGATCGGGCAGCACAACGACCACCCCTTAACCCTCCCTCGCAA ACACCACACGTAGGCTACGCCCGACCTTTTGCGTCATTCTCTTGCATTTC TGCAACTCAGTCACCATGCCGTCATCCGCAAAGAAAGGCGCGGGCGTGCC CACTCGAATCACGCATATCAACGACGACACCGACGATGGACAGCATCCCA TGTCCAAGGCCCACAAGCGCCATTACAAAGAGCCCCTTGTCTCTATGAAG GAAATTATGGCCTACGAGGCCGTGCCGGCCACCTATCCAAAAGTTACTGC GTCGCGCACTATCGCCATCCCCAAGAAGGCCAACAAAAAGCCCTCTGCTT ATTCCTGTTCTGCCACACCCCAAAATATTTCTTCCGCCTCCTCCATCACC ATCACTCCCAAAAGGCGGTCGACGCCCTTGATGCCCCGCCGTCAGACTCC CCAAGAATTAGAGGAGGAAGAAGACGACGAAGAAGGAGAAGATCAGACAG AGACAGAGAGAGCCGCTGCGCCCTCCTCCTCCGTACGTCTAAGCCGGAGG AGTAGCCTTGCCCTCAACAAAACCACCGCAGCAGCAGCAGCAGCAGCAGC ATCATCAGCAGCAACAACGGAAGAAGAGATGGCGGACATGCACCGTCTGC GTGCCCTCGCCATCGAACACGCTGCCCGGGCCCTCCTCCAAAAGAAACAA CAGAGACAAGCCGCCAGACAAGCAACCAATGCCTCCTCCCTGTCCTCTTC CCTTACTGATGCTCCCATCCAATCCCCGTGGGCAACGAAGGCCTTTAGCA AGCCTACGCGGAAAATGGGAAGGAAGAAGATCATTGGTGCCGCAGCTGCT GCCTCTGGATCACAGGAATTGTTTCTCTTTCCTTACCCAGCCACACCCGA AGCATTGGCGAGAGGAAAGGAAAAGACGGGAAGCAATCCTTCCACTGCGG CCGCTGCTACTACTGCTGCTGCTGCCAGTCGTGCTAAATGTGGACAAGCA AGCAGCAAGCAGAATAAAATGCCTACGACACCTGCAGCTGCTGCTGCGGG TGCCGCAGGTGCAGGTGGGGCGGCGAAGGAAGGGGAAAAGAAGAAGGGAA GGAAAAGGGTGATGCTGAGCACTACTACTACTACCACCATCCCTGCTGCA AGGACCCCGGCGAAGGCCCTAGTGACAAGAAGCAGCAACAGCAGCAGCAG CAGCAGTAGCAGGAGGACAACACCCTGTCGAGCCTCCTCCTCCTCCTCCT CCTCCTCCTCCTCCTCTTCCACTCCCGATGCTCTTACTACTGCTTCTGCT CCCTGTATCGCAGCGATCGCAGCGACAGCATCAAAAGCACCAGCACCAGC GGTTTCGAAAATCCCGACGCCCCGCAAGCCCAAGACTGTCGCTGCTGCAG CTGCAGGGAGGACGACTTCAGGAATGACGACCAGGACAAGGAAGGGTCAC GTCCAGCCTCAACCACAGGCACAAGCGCAAATGTGGGAAGAGGGCAGCAG CACCAGCAGCAGGAGTAGCAGTAGGAAGAAGGTGGTTAAGAGGGAGGCAA GGAGGGAGGGAGGGAGGGACGTTGAGGCAAACTATGCGTCGTTTTTGGCC TCTCTGGAACAACAGGAGGGTACGGAAGCATTCTCGACACGGAAGGAGGG AGTGAGGGAGGAAGAAAAGGCGACACTAGGAGTGACGACGATGACAGGGA AGGAGAAAGGGAAGATAACACTGCCGGTTGCAGAGGAGGAGGAGGAGGAG GGAAGGGGGGGAGGAGAGGTGCTGAAGGAGGTGGGTAACAGCAAGAGCAA TAGGCGCAAGACGATTTTTAAGCTTAAGAAGACAACCAAAGTCGCTGCCT ATGTCCCGGAGGAGGACGAGGAAGGGAGGGAGGACGAAGCGGAAGAAGAG GAGGCACTGTTGAAGACGGATCCGATGGCTTACAAAGAATGGATTGAGCG CGTCCCACCGGCGGGCACTAAGGTGGTGAAGGGCCTGTCAGTTGAGGATT GCTTGCGATAAGAAGAATGAGGAAGGCAGGGGGGGAGGGGTTGGAAAGGA GTTAGGGAGGACGAGGAGGAGGGGTCGGTTGTGCCGGCGGGCACTTAGAT GGTATAAGGGCCTGTCAATGATGGGAATGGTGGTGGCAGAGGGAGGGAAA AAAAAATTGGGTGTACATGTAAAGAGAGAACTGAGAAACAGGACGAAGGA GTCTATGTCTGTGTTGTGAACATGGGTTCATGAGGAAAGGAAGGGGAGGA AAGAGGGAGAGAGGAGAGGAGTGTGTGGGGTTTCGGGCGTGATGTTAAGC AGGCGTTTTATTTCGGCCATTCAATTTTTGAATTTCCTGGTTTTTGTTAA CTTTCTAAAAAAGGGATAGTATGGGTGAGACAGATGTTATGAACATTATT AGGAGGATATGAGTGGGGGGAGGGGTGGAAGAAGAAAAAGTCGACGGCAC GGCCGCAGACGCAAAGTTTGAGTCAATCACAGGAATGAATGTATGTAGGC AGCGACGTTGGAGGCGGGGGAGGTTGATGCCGACGAGAGGAAGTGGAAGG AGGCCGAGAACAAGAAGATATACATACACTCATAGCTCTAGCAAGAGATA AAAAAAAATCGAGATTATGATTGTGTTTCGATGCAAGACTCGCGTCCTTT TGGCCACAGACGCATGTTTTCCAAAATAACTTGC back to topprotein sequence of jgi.p|Nanoce1779_2|668910 >mRNA_2241-protein ID=mRNA_2241-protein|Name=jgi.p|Nanoce1779_2|668910|organism=Nannochloropsis oceanica|type=polypeptide|length=632bp MPSSAKKGAGVPTRITHINDDTDDGQHPMSKAHKRHYKEPLVSMKEIMAY EAVPATYPKVTASRTIAIPKKANKKPSAYSCSATPQNISSASSITITPKR RSTPLMPRRQTPQELEEEEDDEEGEDQTETERAAAPSSSVRLSRRSSLAL NKTTAAAAAAAASSAATTEEEMADMHRLRALAIEHAARALLQKKQQRQAA RQATNASSLSSSLTDAPIQSPWATKAFSKPTRKMGRKKIIGAAAAASGSQ ELFLFPYPATPEALARGKEKTGSNPSTAAAATTAAAASRAKCGQASSKQN KMPTTPAAAAAGAAGAGGAAKEGEKKKGRKRVMLSTTTTTTIPAARTPAK ALVTRSSNSSSSSSSRRTTPCRASSSSSSSSSSSSTPDALTTASAPCIAA IAATASKAPAPAVSKIPTPRKPKTVAAAAAGRTTSGMTTRTRKGHVQPQP QAQAQMWEEGSSTSSRSSSRKKVVKREARREGGRDVEANYASFLASLEQQ EGTEAFSTRKEGVREEEKATLGVTTMTGKEKGKITLPVAEEEEEEGRGGG EVLKEVGNSKSNRRKTIFKLKKTTKVAAYVPEEDEEGREDEAEEEEALLK TDPMAYKEWIERVPPAGTKVVKGLSVEDCLR* back to topmRNA from alignment at scaffold_4:1152130..1155069- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2241 ID=mRNA_2241|Name=jgi.p|Nanoce1779_2|668910|organism=Nannochloropsis oceanica|type=mRNA|length=2940bp|location=Sequence derived from alignment at scaffold_4:1152130..1155069- (Nannochloropsis oceanica) GAGGACGACCAACGGAGACGCACTGCAAGTTTTGGAGAGTTGTGTGTCCA
AGTCAAGGCTTACAAGGCTAGATCTGCACTATACACTGCTGCGGCATCGG
CATTGGCGCGCTCGCCGAAGTTATAAACGTTCGTTACAGAGGAAGAGGTC
GATCGATCGATCGGGCAGCACAACGACCACCCCTTAACCCTCCCTCGCAA
ACACCACACGTAGGCTACGCCCGACCTTTTGCGTCATTCTCTTGCATTTC
TGCAACTCAGTCACCATGCCGTCATCCGCAAAGAAAGGTAAGAAGGACAA
CCGAAGAGTGACCACTAGCGCGCTCACACCCATGCGCCGCAGGTTGTAGT
GGAGCGTCCAATCACCCATCTCTTTTCACATAAACACCCACAGGCGCGGG
CGTGCCCACTCGAATCACGCATATCAACGACGACACCGACGATGGACAGC
ATCCCATGTCCAAGGCCCACAAGCGCCATTACAAAGAGCCCCTTGTCTCT
ATGAAGGAAATTATGGCCTACGAGGCCGTGCCGGCCACCTATCCAAAAGT
TACTGCGTCGCGCACTATCGCCATCCCCAAGAAGGCCAACAAAAAGCCCT
CTGCTTATTCCTGTTCTGCCACACCCCAAAATATTTCTTCCGCCTCCTCC
ATCACCATCACTCCCAAAAGGCGGTCGACGCCCTTGATGCCCCGCCGTCA
GACTCCCCAAGAATTAGAGGAGGAAGAAGACGACGAAGAAGGAGAAGATC
AGACAGAGACAGAGAGAGCCGCTGCGCCCTCCTCCTCCGTACGTCTAAGC
CGGAGGAGTAGCCTTGCCCTCAACAAAACCACCGCAGCAGCAGCAGCAGC
AGCAGCATCATCAGCAGCAACAACGGAAGAAGAGATGGCGGACATGCACC
GTCTGCGTGCCCTCGCCATCGAACACGCTGCCCGGGCCCTCCTCCAAAAG
AAACAACAGAGACAAGCCGCCAGACAAGCAACCAATGCCTCCTCCCTGTC
CTCTTCCCTTACTGATGCTCCCATCCAATCCCCGTGGGCAACGAAGGCCT
TTAGCAAGCCTACGCGGAAAATGGGAAGGAAGAAGATCATTGGTGCCGCA
GCTGCTGCCTCTGGATCACAGGAATTGTTTCTCTTTCCTTACCCAGCCAC
ACCCGAAGCATTGGCGAGAGGAAAGGAAAAGACGGGAAGCAATCCTTCCA
CTGCGGCCGCTGCTACTACTGCTGCTGCTGCCAGTCGTGCTAAATGTGGA
CAAGCAAGCAGCAAGCAGAATAAAATGCCTACGACACCTGCAGCTGCTGC
TGCGGGTGCCGCAGGTGCAGGTGGGGCGGCGAAGGAAGGGGAAAAGAAGA
AGGGAAGGAAAAGGGTGATGCTGAGCACTACTACTACTACCACCATCCCT
GCTGCAAGGACCCCGGCGAAGGCCCTAGTGACAAGAAGCAGCAACAGCAG
CAGCAGCAGCAGTAGCAGGAGGACAACACCCTGTCGAGCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCTTCCACTCCCGATGCTCTTACTACTGCT
TCTGCTCCCTGTATCGCAGCGATCGCAGCGACAGCATCAAAAGCACCAGC
ACCAGCGGTTTCGAAAATCCCGACGCCCCGCAAGCCCAAGACTGTCGCTG
CTGCAGCTGCAGGGAGGACGACTTCAGGAATGACGACCAGGACAAGGAAG
GGTCACGTCCAGCCTCAACCACAGGCACAAGCGCAAATGTGGGAAGAGGG
CAGCAGCACCAGCAGCAGGAGTAGCAGTAGGAAGAAGGTGGTTAAGAGGG
AGGCAAGGAGGGAGGGAGGGAGGGACGTTGAGGCAAACTATGCGTCGTTT
TTGGCCTCTCTGGAACAACAGGAGGGTACGGAAGCATTCTCGACACGGAA
GGAGGGAGTGAGGGAGGAAGAAAAGGCGACACTAGGAGTGACGACGATGA
CAGGGAAGGAGAAAGGGAAGATAACACTGCCGGTTGCAGAGGAGGAGGAG
GAGGAGGGAAGGGGGGGAGGAGAGGTGCTGAAGGAGGTGGGTAACAGCAA
GAGCAATAGGCGCAAGACGATTTTTAAGCTTAAGAAGACAACCAAAGTCG
CTGCCTATGTCCCGGAGGAGGACGAGGAAGGGAGGGAGGACGAAGCGGAA
GAAGAGGAGGCACTGTTGAAGACGGATCCGATGGCTTACAAAGAATGGAT
TGAGCGCGTCCCACCGGCGGGCACTAAGGTGGTGAAGGGCCTGTCAGTTG
AGGATTGCTTGCGATAAGAAGAATGAGGAAGGCAGGGGGGGAGGGGTTGG
AAAGGAGTTAGGGAGGACGAGGAGGAGGGGTCGGTTGTGCCGGCGGGCAC
TTAGATGGTATAAGGGCCTGTCAATGATGGGAATGGTGGTGGCAGAGGGA
GGGAAAAAAAAATTGGGTGTACATGTAAAGAGAGAACTGAGAAACAGGAC
GAAGGAGTCTATGTCTGTGTTGTGAACATGGGTTCATGAGGAAAGGAAGG
GGAGGAAAGAGGGAGAGAGGAGAGGAGTGTGTGGGGTTTCGGGCGTGATG
TTAAGCAGGCGTTTTATTTCGGCCATTCAATTTTTGAATTTCCTGGTTTT
TGTTAACTTTCTAAAAAAGGGATAGTATGGGTGAGACAGATGTTATGAAC
ATTATTAGGAGGATATGAGTGGGGGGAGGGGTGGAAGAAGAAAAAGTCGA
CGGCACGGCCGCAGACGCAAAGTTTGAGTCAATCACAGGAATGAATGTAT
GTAGGCAGCGACGTTGGAGGCGGGGGAGGTTGATGCCGACGAGAGGAAGT
GGAAGGAGGCCGAGAACAAGAAGATATACATACACTCATAGCTCTAGCAA
GAGATAAAAAAAAATCGAGATTATGATTGTGTTTCGATGCAAGACTCGCG
TCCTTTTGGCCACAGACGCATGTTTTCCAAAATAACTTGC back to topCoding sequence (CDS) from alignment at scaffold_4:1152130..1155069- >mRNA_2241 ID=mRNA_2241|Name=jgi.p|Nanoce1779_2|668910|organism=Nannochloropsis oceanica|type=CDS|length=3792bp|location=Sequence derived from alignment at scaffold_4:1152130..1155069- (Nannochloropsis oceanica) GCGCGGGCGTGCCCACTCGAATCACGCATATCAACGACGACACCGACGAT GGACAGCATCCCATGTCCAAGGCCCACAAGCGCCATTACAAAGAGCCCCT TGTCTCTATGAAGGAAATTATGGCCTACGAGGCCGTGCCGGCCACCTATC CAAAAGTTACTGCGTCGCGCACTATCGCCATCCCCAAGAAGGCCAACAAA AAGCCCTCTGCTTATTCCTGTTCTGCCACACCCCAAAATATTTCTTCCGC CTCCTCCATCACCATCACTCCCAAAAGGCGGTCGACGCCCTTGATGCCCC GCCGTCAGACTCCCCAAGAATTAGAGGAGGAAGAAGACGACGAAGAAGGA GAAGATCAGACAGAGACAGAGAGAGCCGCTGCGCCCTCCTCCTCCGTACG TCTAAGCCGGAGGAGTAGCCTTGCCCTCAACAAAACCACCGCAGCAGCAG CAGCAGCAGCAGCATCATCAGCAGCAACAACGGAAGAAGAGATGGCGGAC ATGCACCGTCTGCGTGCCCTCGCCATCGAACACGCTGCCCGGGCCCTCCT CCAAAAGAAACAACAGAGACAAGCCGCCAGACAAGCAACCAATGCCTCCT CCCTGTCCTCTTCCCTTACTGATGCTCCCATCCAATCCCCGTGGGCAACG AAGGCCTTTAGCAAGCCTACGCGGAAAATGGGAAGGAAGAAGATCATTGG TGCCGCAGCTGCTGCCTCTGGATCACAGGAATTGTTTCTCTTTCCTTACC CAGCCACACCCGAAGCATTGGCGAGAGGAAAGGAAAAGACGGGAAGCAAT CCTTCCACTGCGGCCGCTGCTACTACTGCTGCTGCTGCCAGTCGTGCTAA ATGTGGACAAGCAAGCAGCAAGCAGAATAAAATGCCTACGACACCTGCAG CTGCTGCTGCGGGTGCCGCAGGTGCAGGTGGGGCGGCGAAGGAAGGGGAA AAGAAGAAGGGAAGGAAAAGGGTGATGCTGAGCACTACTACTACTACCAC CATCCCTGCTGCAAGGACCCCGGCGAAGGCCCTAGTGACAAGAAGCAGCA ACAGCAGCAGCAGCAGCAGTAGCAGGAGGACAACACCCTGTCGAGCCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCACTCCCGATGCTCTTAC TACTGCTTCTGCTCCCTGTATCGCAGCGATCGCAGCGACAGCATCAAAAG CACCAGCACCAGCGGTTTCGAAAATCCCGACGCCCCGCAAGCCCAAGACT GTCGCTGCTGCAGCTGCAGGGAGGACGACTTCAGGAATGACGACCAGGAC AAGGAAGGGTCACGTCCAGCCTCAACCACAGGCACAAGCGCAAATGTGGG AAGAGGGCAGCAGCACCAGCAGCAGGAGTAGCAGTAGGAAGAAGGTGGTT AAGAGGGAGGCAAGGAGGGAGGGAGGGAGGGACGTTGAGGCAAACTATGC GTCGTTTTTGGCCTCTCTGGAACAACAGGAGGGTACGGAAGCATTCTCGA CACGGAAGGAGGGAGTGAGGGAGGAAGAAAAGGCGACACTAGGAGTGACG ACGATGACAGGGAAGGAGAAAGGGAAGATAACACTGCCGGTTGCAGAGGA GGAGGAGGAGGAGGGAAGGGGGGGAGGAGAGGTGCTGAAGGAGGTGGGTA ACAGCAAGAGCAATAGGCGCAAGACGATTTTTAAGCTTAAGAAGACAACC AAAGTCGCTGCCTATGTCCCGGAGGAGGACGAGGAAGGGAGGGAGGACGA AGCGGAAGAAGAGGAGGCACTGTTGAAGACGGATCCGATGGCTTACAAAG AATGGATTGAGCGCGTCCCACCGGCGGGCACTAAGGTGGTGAAGGGCCTG TCAGTTGAGGATTGCTTGCGATAAATGCCGTCATCCGCAAAGAAAGGCGC GGGCGTGCCCACTCGAATCACGCATATCAACGACGACACCGACGATGGAC AGCATCCCATGTCCAAGGCCCACAAGCGCCATTACAAAGAGCCCCTTGTC TCTATGAAGGAAATTATGGCCTACGAGGCCGTGCCGGCCACCTATCCAAA AGTTACTGCGTCGCGCACTATCGCCATCCCCAAGAAGGCCAACAAAAAGC CCTCTGCTTATTCCTGTTCTGCCACACCCCAAAATATTTCTTCCGCCTCC TCCATCACCATCACTCCCAAAAGGCGGTCGACGCCCTTGATGCCCCGCCG TCAGACTCCCCAAGAATTAGAGGAGGAAGAAGACGACGAAGAAGGAGAAG ATCAGACAGAGACAGAGAGAGCCGCTGCGCCCTCCTCCTCCGTACGTCTA AGCCGGAGGAGTAGCCTTGCCCTCAACAAAACCACCGCAGCAGCAGCAGC AGCAGCAGCATCATCAGCAGCAACAACGGAAGAAGAGATGGCGGACATGC ACCGTCTGCGTGCCCTCGCCATCGAACACGCTGCCCGGGCCCTCCTCCAA AAGAAACAACAGAGACAAGCCGCCAGACAAGCAACCAATGCCTCCTCCCT GTCCTCTTCCCTTACTGATGCTCCCATCCAATCCCCGTGGGCAACGAAGG CCTTTAGCAAGCCTACGCGGAAAATGGGAAGGAAGAAGATCATTGGTGCC GCAGCTGCTGCCTCTGGATCACAGGAATTGTTTCTCTTTCCTTACCCAGC CACACCCGAAGCATTGGCGAGAGGAAAGGAAAAGACGGGAAGCAATCCTT CCACTGCGGCCGCTGCTACTACTGCTGCTGCTGCCAGTCGTGCTAAATGT GGACAAGCAAGCAGCAAGCAGAATAAAATGCCTACGACACCTGCAGCTGC TGCTGCGGGTGCCGCAGGTGCAGGTGGGGCGGCGAAGGAAGGGGAAAAGA AGAAGGGAAGGAAAAGGGTGATGCTGAGCACTACTACTACTACCACCATC CCTGCTGCAAGGACCCCGGCGAAGGCCCTAGTGACAAGAAGCAGCAACAG CAGCAGCAGCAGCAGTAGCAGGAGGACAACACCCTGTCGAGCCTCCTCCT CCTCCTCCTCCTCCTCCTCCTCCTCTTCCACTCCCGATGCTCTTACTACT GCTTCTGCTCCCTGTATCGCAGCGATCGCAGCGACAGCATCAAAAGCACC AGCACCAGCGGTTTCGAAAATCCCGACGCCCCGCAAGCCCAAGACTGTCG CTGCTGCAGCTGCAGGGAGGACGACTTCAGGAATGACGACCAGGACAAGG AAGGGTCACGTCCAGCCTCAACCACAGGCACAAGCGCAAATGTGGGAAGA GGGCAGCAGCACCAGCAGCAGGAGTAGCAGTAGGAAGAAGGTGGTTAAGA GGGAGGCAAGGAGGGAGGGAGGGAGGGACGTTGAGGCAAACTATGCGTCG TTTTTGGCCTCTCTGGAACAACAGGAGGGTACGGAAGCATTCTCGACACG GAAGGAGGGAGTGAGGGAGGAAGAAAAGGCGACACTAGGAGTGACGACGA TGACAGGGAAGGAGAAAGGGAAGATAACACTGCCGGTTGCAGAGGAGGAG GAGGAGGAGGGAAGGGGGGGAGGAGAGGTGCTGAAGGAGGTGGGTAACAG CAAGAGCAATAGGCGCAAGACGATTTTTAAGCTTAAGAAGACAACCAAAG TCGCTGCCTATGTCCCGGAGGAGGACGAGGAAGGGAGGGAGGACGAAGCG GAAGAAGAGGAGGCACTGTTGAAGACGGATCCGATGGCTTACAAAGAATG GATTGAGCGCGTCCCACCGGCGGGCACTAAGGTGGTGAAGGGCCTGTCAG TTGAGGATTGCTTGCGATAAATGCCGTCATCCGCAAAGAAAG back to top
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