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Properties
| Property Name | Value |
| TranscriptId | 576681 |
| Track | FilteredModels2 |
| ProteinId | 576595 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_3 | supercontig | scaffold_3:557584..561557 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_224 ID=mRNA_224|Name=jgi.p|Nanoce1779_2|576595|organism=Nannochloropsis oceanica|type=mRNA|length=3974bp ACAGATCTCACAGCCATGCAAGTGCAGGCAACCTCGCCAGGCGGACCTTC CAACCTTCTCGGAGGGTTCAAGGAGAGATTGGGAAGCCTCGAGTGCCGCC GGTCCTCCCCCTCGACCCCTTTATCTCCACCGTCAACATCGTCGCAAGAG GACCAGCCCCCGATGCGCATGTGTATGCCCTCCCAGACCGGTGCTGCTTT CCCTTCGCAGCACAAGCACCACATTCAGTCTCCGGGACAGCTCAAGCTGC AGGGGGGGGAGGAGGAAGATGTGAAGGTGGGGGAGGAAGCAGCGCAGTCG ACCGTGGAGGAGCTGGAGCGTGGCATGGTGGGCGAGGCGCAAGTGATGGA GGAACTGCTACGGGTTCGTGAATCATTTATTTGCAAAGGATGGGGGGAGC TGCTCGGAAGCCTCAAGGCAGGCAAGTCGCTGGTGATATTGGCGAGGGAA GAGGAGAGGCGAGCCCAGCTGCTAAAAAACAAGCCGCAACAGCAGGACGG CCACTTGCATGCTCTGTTTCAGGCTGCGGAGGGCGACATTAAAGTCATGG TGAAAGCTTTTCTGCGGGAACATGCGCAGCAAGAGCTGGCTCAAGAGGAG CTGCTGCGCGGGAAGACAAAGGTGGAAGCCTTGCTGGACACTTTGAAGGA AGCGCAAATCCGCTTGGTCAAGGAGGAGGAAATTGTGGCGGGACAGCAGG GCGAACAGGACGAGGAAGAGGAATTGGTCGCGGAGCAAGAGTGTCAAGAA CAGGTACAGCAATGTGAGGCAGCACTGCAAGCGGCCAAGGCCCAGAACGA CTTGGCGGAGACGCGTATCCTGGAATGGCAAGCCAAGCTGAACCAGCTTG AGGCTCTGGGGGTGGCCGAACGAGAGGTGATGGAGGTGGACGACTTACGT TCTGCCACGGCACAGGACGAGATCGAGACGCTCGGTGAGGCAGCGCGGCT CCGCAAGCAGGCAGAGACGCTGTGCGCGGTGCTGGATATGTTACAAGGCC TATACCGCGTGACGGTGACGGTGCTGGACGAAGCCGAGGCGGGGCCGAGC GATATGGTCCTCCGGCTGGCATATCCCTCCAAGCACGCCCTAGAGATGAC GCTTTCGATGAGGGGTCAAGCGATCCAGCTGCTGCATGCTCGTCTGGAGA TGCCCCTCATGCAGCAACGGCGGAAGTCGGTGGCCACGGCTGAGGCGCAG CGCCTGATGATGAATCAGGTGGACAACCTCGTAACAGTAGCGCAAGGCTT GCCAGCACCCCAGGACCTTCTGTTCCTGGCGCGGGAGGTGGGCTGGATGG TTGCTTCGCGGGGCGTTGCGAAACAGGAGATCCGCGAGCTTATGAAAAGG TACATCGTCAAACACAACGAGGGCATGGATGAGCTGACGGTCACATTCGC CGAGGGCGTTGTCGCCTCCTTCTCCCTTCTGTCCGGCTACCCTAATATGC CGGGCAGTGTACGCATCGCGGGCTTGGTGGGCGTGGGCGGCTGGAAGGAC TGCGAGCTGGCTGTCACGAGCCGCTGCTTGAATGGGCTGGGCTTGGACTC ACTGACGGCCTTGATTGATGCCCTGCACGAGCGCATCGTGGAGCTGGACA AGAAAGCTGAGTAAGAGAGCTGCGTGGGGATCAAGAAGAAGAAAGACACA GAGAAGGATGGGAGTGGGTGAGGGAGAGTGCAGATAAAATGGTGTGGGGG TTTATGATGGAATACTGTGTAGGAAAAAACGAGCAAGGAAAGGACCCGGA ACAAGTTGAAGAAAAGAAAACTGAACAAATAATAAAAAACGAACAACTGT GGGTGATTCTCAGAGGGCTGAGCGATTGGAAAGTGAATTGAGTGGCGTGC GGGAGCAGTTTAGAGGGGGAAATAACAAATGAGCAACATATGACTGTGCC AGAAACGTAGGACAAGGATTACAGAACACGCAATGACTTTCTTCTTTGTT GTACTTCTTATCTCAGGCGCCGTCCTCCTTTAAGGAAAATGGGACAAGGC TTTTACCACTACATAAAATCACATTATCCTATATCATTGCTTTCTTGCTA CTGCTTGCTAAAGCTGTAACAGCTGTTCCTTCGCTATCTACGACAAAATC ACCTCACCACGCAAATAATTAATATAGTCTAGTGTCCGATATCTACTTTC GTTCTCATTTTTGGTCCTCAAAGTGTAGCTGCGTGGAAACCCGACACGCT CGCATACAACCACACAAGTCATCATTTCCAATGTCGTCTCTCATTCTCAT CAGTAGGATAGCATCAGGCTTAGCACGTCGGCCGTAGGTGGCAAAGGGAC AGGGTTCATAGGCGCCTGCCCTTGCCATTGACCACCGCCGCTTGCCCCTC CCTTCGTCTTCTTCTTCTTACCACCACTTCCTGCCCCGCCCACGTGGCTC CACCCGTCCTCTGCGGCGGGAGCTTGTAGAATCCTGCGCCCCATCTCAAT GCCATGAGCCTCGAGCGAGGCCAGACATTGCTGGAATAAGACCTGGATCT CCCCTATCCGGAAAGCACAACGTGAGACGTTCACCGCTCGATCCAAGGGG TCAAGAATTGTGAGTGGGTCGGCCACCACAGGCAAGCCATGCGTCAGAAA AAAGTCGGCCAGGGGGAAGGTCAGGCCATAGCCCTGGTCCACCGCGATGC CCTCGACTTGAGGGTTGAAAATCCGCCCAAAGTACTCCAGAAAGTACGTA AGCAAAAAACCTGAGGTCATTCCCTTCTTCTCGGAATTCCCATCCGCACT TTCCACCCCCTTGCCCCCGCCATCATTTCTGTCCTCCATACCGCCATCCG ACGTCATCTGCGCCGCCGCGAACTGAGACCAGAGCCGGTAGGAGATCTCG GCCGGGCTACCGTACCCGCCTTTGACAAGCGGCGGGGGTGGCTTCACCTC CATCAGCGTCGTTTCCGCCGTAACCGGTTCCTCGAGGGGCCCATTGCCTC CACGCAAGGCCTTGCCATAATCCATGGGGCCGTCCGGTACAGGGTTGCCA GACGAATGCAATCGCCTACTCGTCTTGTCCCTGTCTGCAGGAATCGTTAC ACCCTTGCTCCGGCTCCTGACGTCGCTGCCGCTGCTCCCACTCCCACCAC TCCCCCTACAGCCAGCATTGCAGCTACTGCTGTTGCTAGGCACCGGAGGG ATAGCACGGCGTTTGATGGTATCGACAGAACGGGCTATGGCTAGGACGTT GGCCTGCGCTACCTCAGGCGTCTCAAACTGTTGCAGAACGGCGATTACCA TGAGCATGAGCGCGTATGATGACACGCCACCGCACCAGGGCTGGTTCAGG CCTCGCTGCGTCATTAGTGCCTTCAGCACCAACGTCAAGGGCACGGCGTG CGCGTAGGGCCTACCGGGTGCCACCAGATCCCTTATGAGGAGTGAACTGG CAATACCCCCGTGCTGCCGGCCCTCGAAAGAAATGTCGACCGGCACCAAC GCAGTTGCGGGCGTTGGAAGTGAATCCGGCACGCCCATAAGCACGGCCGG GTCAGCAAGGATCTTGATTACAGGGATGAATGCTGTATCGATGGTCTTAA GCGAGCGCACCCACGGCCGACATTCCAAGGTGGCAGCCAGCTGGTACAAA AGCCGCGTCGATTCGCCATGCCCGGGAGGCAAGGGGCGGGGCGGCGTGGC TGACATAAATATGATGCTGCTATTGGAAGCACTAGTGGCGGGTCCCAGGC GCGGGGAGGAGGCGGGGGAGGAGAGCGCAGGGGATCGGGAACCAGCCGGG GTGGACCTGGTCGCGACACTGCTACTGCTCGTGTCACTGAGCTGGCTGTG GCTGTGGATATCTGTCTCTTCCTCCTCTTCATCTACAACGGACGAGGCGG CGCTCGAAGGCCCAGTCGCGACGGTGGTGGAGGCCCTGCTGCTGCTGCTG CCGCTGCCACTGCTGATGGTGGTGGCCACACTGTAACCTCCATCTGGAGA AGACGAAGCCGTGGACTCGTTGTG back to topprotein sequence of jgi.p|Nanoce1779_2|576595 >mRNA_224-protein ID=mRNA_224-protein|Name=jgi.p|Nanoce1779_2|576595|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp MQVQATSPGGPSNLLGGFKERLGSLECRRSSPSTPLSPPSTSSQEDQPPM RMCMPSQTGAAFPSQHKHHIQSPGQLKLQGGEEEDVKVGEEAAQSTVEEL ERGMVGEAQVMEELLRVRESFICKGWGELLGSLKAGKSLVILAREEERRA QLLKNKPQQQDGHLHALFQAAEGDIKVMVKAFLREHAQQELAQEELLRGK TKVEALLDTLKEAQIRLVKEEEIVAGQQGEQDEEEELVAEQECQEQVQQC EAALQAAKAQNDLAETRILEWQAKLNQLEALGVAEREVMEVDDLRSATAQ DEIETLGEAARLRKQAETLCAVLDMLQGLYRVTVTVLDEAEAGPSDMVLR LAYPSKHALEMTLSMRGQAIQLLHARLEMPLMQQRRKSVATAEAQRLMMN QVDNLVTVAQGLPAPQDLLFLAREVGWMVASRGVAKQEIRELMKRYIVKH NEGMDELTVTFAEGVVASFSLLSGYPNMPGSVRIAGLVGVGGWKDCELAV TSRCLNGLGLDSLTALIDALHERIVELDKKAE* back to topmRNA from alignment at scaffold_3:557584..561557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_224 ID=mRNA_224|Name=jgi.p|Nanoce1779_2|576595|organism=Nannochloropsis oceanica|type=mRNA|length=3974bp|location=Sequence derived from alignment at scaffold_3:557584..561557+ (Nannochloropsis oceanica) ACAGATCTCACAGCCATGCAAGTGCAGGCAACCTCGCCAGGCGGACCTTC
CAACCTTCTCGGAGGGTTCAAGGAGAGATTGGGAAGCCTCGAGTGCCGCC
GGTCCTCCCCCTCGACCCCTTTATCTCCACCGTCAACATCGTCGCAAGAG
GACCAGCCCCCGATGCGCATGTGTATGCCCTCCCAGACCGGTGCTGCTTT
CCCTTCGCAGCACAAGCACCACATTCAGTCTCCGGGACAGCTCAAGCTGC
AGGGGGGGGAGGAGGAAGATGTGAAGGTGGGGGAGGAAGCAGCGCAGTCG
ACCGTGGAGGAGCTGGAGCGTGGCATGGTGGGCGAGGCGCAAGTGATGGA
GGAACTGCTACGGGTTCGTGAATCATTTATTTGCAAAGGATGGGGGGAGC
TGCTCGGAAGCCTCAAGGCAGGCAAGTCGCTGGTGATATTGGCGAGGGAA
GAGGAGAGGCGAGCCCAGCTGCTAAAAAACAAGCCGCAACAGCAGGACGG
CCACTTGCATGCTCTGTTTCAGGCTGCGGAGGGCGACATTAAAGTCATGG
TGAAAGCTTTTCTGCGGGAACATGCGCAGCAAGAGCTGGCTCAAGAGGAG
CTGCTGCGCGGGAAGACAAAGGTGGAAGCCTTGCTGGACACTTTGAAGGA
AGCGCAAATCCGCTTGGTCAAGGAGGAGGAAATTGTGGCGGGACAGCAGG
GCGAACAGGACGAGGAAGAGGAATTGGTCGCGGAGCAAGAGTGTCAAGAA
CAGGTACAGCAATGTGAGGCAGCACTGCAAGCGGCCAAGGCCCAGAACGA
CTTGGCGGAGACGCGTATCCTGGAATGGCAAGCCAAGCTGAACCAGCTTG
AGGCTCTGGGGGTGGCCGAACGAGAGGTGATGGAGGTGGACGACTTACGT
TCTGCCACGGCACAGGACGAGATCGAGACGCTCGGTGAGGCAGCGCGGCT
CCGCAAGCAGGCAGAGACGCTGTGCGCGGTGCTGGATATGTTACAAGGCC
TATACCGCGTGACGGTGACGGTGCTGGACGAAGCCGAGGCGGGGCCGAGC
GATATGGTCCTCCGGCTGGCATATCCCTCCAAGCACGCCCTAGAGATGAC
GCTTTCGATGAGGGGTCAAGCGATCCAGCTGCTGCATGCTCGTCTGGAGA
TGCCCCTCATGCAGCAACGGCGGAAGTCGGTGGCCACGGCTGAGGCGCAG
CGCCTGATGATGAATCAGGTGGACAACCTCGTAACAGTAGCGCAAGGCTT
GCCAGCACCCCAGGACCTTCTGTTCCTGGCGCGGGAGGTGGGCTGGATGG
TTGCTTCGCGGGGCGTTGCGAAACAGGAGATCCGCGAGCTTATGAAAAGG
TACATCGTCAAACACAACGAGGGCATGGATGAGCTGACGGTCACATTCGC
CGAGGGCGTTGTCGCCTCCTTCTCCCTTCTGTCCGGCTACCCTAATATGC
CGGGCAGTGTACGCATCGCGGGCTTGGTGGGCGTGGGCGGCTGGAAGGAC
TGCGAGCTGGCTGTCACGAGCCGCTGCTTGAATGGGCTGGGCTTGGACTC
ACTGACGGCCTTGATTGATGCCCTGCACGAGCGCATCGTGGAGCTGGACA
AGAAAGCTGAGTAAGAGAGCTGCGTGGGGATCAAGAAGAAGAAAGACACA
GAGAAGGATGGGAGTGGGTGAGGGAGAGTGCAGATAAAATGGTGTGGGGG
TTTATGATGGAATACTGTGTAGGAAAAAACGAGCAAGGAAAGGACCCGGA
ACAAGTTGAAGAAAAGAAAACTGAACAAATAATAAAAAACGAACAACTGT
GGGTGATTCTCAGAGGGCTGAGCGATTGGAAAGTGAATTGAGTGGCGTGC
GGGAGCAGTTTAGAGGGGGAAATAACAAATGAGCAACATATGACTGTGCC
AGAAACGTAGGACAAGGATTACAGAACACGCAATGACTTTCTTCTTTGTT
GTACTTCTTATCTCAGGCGCCGTCCTCCTTTAAGGAAAATGGGACAAGGC
TTTTACCACTACATAAAATCACATTATCCTATATCATTGCTTTCTTGCTA
CTGCTTGCTAAAGCTGTAACAGCTGTTCCTTCGCTATCTACGACAAAATC
ACCTCACCACGCAAATAATTAATATAGTCTAGTGTCCGATATCTACTTTC
GTTCTCATTTTTGGTCCTCAAAGTGTAGCTGCGTGGAAACCCGACACGCT
CGCATACAACCACACAAGTCATCATTTCCAATGTCGTCTCTCATTCTCAT
CAGTAGGATAGCATCAGGCTTAGCACGTCGGCCGTAGGTGGCAAAGGGAC
AGGGTTCATAGGCGCCTGCCCTTGCCATTGACCACCGCCGCTTGCCCCTC
CCTTCGTCTTCTTCTTCTTACCACCACTTCCTGCCCCGCCCACGTGGCTC
CACCCGTCCTCTGCGGCGGGAGCTTGTAGAATCCTGCGCCCCATCTCAAT
GCCATGAGCCTCGAGCGAGGCCAGACATTGCTGGAATAAGACCTGGATCT
CCCCTATCCGGAAAGCACAACGTGAGACGTTCACCGCTCGATCCAAGGGG
TCAAGAATTGTGAGTGGGTCGGCCACCACAGGCAAGCCATGCGTCAGAAA
AAAGTCGGCCAGGGGGAAGGTCAGGCCATAGCCCTGGTCCACCGCGATGC
CCTCGACTTGAGGGTTGAAAATCCGCCCAAAGTACTCCAGAAAGTACGTA
AGCAAAAAACCTGAGGTCATTCCCTTCTTCTCGGAATTCCCATCCGCACT
TTCCACCCCCTTGCCCCCGCCATCATTTCTGTCCTCCATACCGCCATCCG
ACGTCATCTGCGCCGCCGCGAACTGAGACCAGAGCCGGTAGGAGATCTCG
GCCGGGCTACCGTACCCGCCTTTGACAAGCGGCGGGGGTGGCTTCACCTC
CATCAGCGTCGTTTCCGCCGTAACCGGTTCCTCGAGGGGCCCATTGCCTC
CACGCAAGGCCTTGCCATAATCCATGGGGCCGTCCGGTACAGGGTTGCCA
GACGAATGCAATCGCCTACTCGTCTTGTCCCTGTCTGCAGGAATCGTTAC
ACCCTTGCTCCGGCTCCTGACGTCGCTGCCGCTGCTCCCACTCCCACCAC
TCCCCCTACAGCCAGCATTGCAGCTACTGCTGTTGCTAGGCACCGGAGGG
ATAGCACGGCGTTTGATGGTATCGACAGAACGGGCTATGGCTAGGACGTT
GGCCTGCGCTACCTCAGGCGTCTCAAACTGTTGCAGAACGGCGATTACCA
TGAGCATGAGCGCGTATGATGACACGCCACCGCACCAGGGCTGGTTCAGG
CCTCGCTGCGTCATTAGTGCCTTCAGCACCAACGTCAAGGGCACGGCGTG
CGCGTAGGGCCTACCGGGTGCCACCAGATCCCTTATGAGGAGTGAACTGG
CAATACCCCCGTGCTGCCGGCCCTCGAAAGAAATGTCGACCGGCACCAAC
GCAGTTGCGGGCGTTGGAAGTGAATCCGGCACGCCCATAAGCACGGCCGG
GTCAGCAAGGATCTTGATTACAGGGATGAATGCTGTATCGATGGTCTTAA
GCGAGCGCACCCACGGCCGACATTCCAAGGTGGCAGCCAGCTGGTACAAA
AGCCGCGTCGATTCGCCATGCCCGGGAGGCAAGGGGCGGGGCGGCGTGGC
TGACATAAATATGATGCTGCTATTGGAAGCACTAGTGGCGGGTCCCAGGC
GCGGGGAGGAGGCGGGGGAGGAGAGCGCAGGGGATCGGGAACCAGCCGGG
GTGGACCTGGTCGCGACACTGCTACTGCTCGTGTCACTGAGCTGGCTGTG
GCTGTGGATATCTGTCTCTTCCTCCTCTTCATCTACAACGGACGAGGCGG
CGCTCGAAGGCCCAGTCGCGACGGTGGTGGAGGCCCTGCTGCTGCTGCTG
CCGCTGCCACTGCTGATGGTGGTGGCCACACTGTAACCTCCATCTGGAGA
AGACGAAGCCGTGGACTCGTTGTG back to topCoding sequence (CDS) from alignment at scaffold_3:557584..561557+ >mRNA_224 ID=mRNA_224|Name=jgi.p|Nanoce1779_2|576595|organism=Nannochloropsis oceanica|type=CDS|length=1599bp|location=Sequence derived from alignment at scaffold_3:557584..561557+ (Nannochloropsis oceanica) ATGCAAGTGCAGGCAACCTCGCCAGGCGGACCTTCCAACCTTCTCGGAGG GTTCAAGGAGAGATTGGGAAGCCTCGAGTGCCGCCGGTCCTCCCCCTCGA CCCCTTTATCTCCACCGTCAACATCGTCGCAAGAGGACCAGCCCCCGATG CGCATGTGTATGCCCTCCCAGACCGGTGCTGCTTTCCCTTCGCAGCACAA GCACCACATTCAGTCTCCGGGACAGCTCAAGCTGCAGGGGGGGGAGGAGG AAGATGTGAAGGTGGGGGAGGAAGCAGCGCAGTCGACCGTGGAGGAGCTG GAGCGTGGCATGGTGGGCGAGGCGCAAGTGATGGAGGAACTGCTACGGGT TCGTGAATCATTTATTTGCAAAGGATGGGGGGAGCTGCTCGGAAGCCTCA AGGCAGGCAAGTCGCTGGTGATATTGGCGAGGGAAGAGGAGAGGCGAGCC CAGCTGCTAAAAAACAAGCCGCAACAGCAGGACGGCCACTTGCATGCTCT GTTTCAGGCTGCGGAGGGCGACATTAAAGTCATGGTGAAAGCTTTTCTGC GGGAACATGCGCAGCAAGAGCTGGCTCAAGAGGAGCTGCTGCGCGGGAAG ACAAAGGTGGAAGCCTTGCTGGACACTTTGAAGGAAGCGCAAATCCGCTT GGTCAAGGAGGAGGAAATTGTGGCGGGACAGCAGGGCGAACAGGACGAGG AAGAGGAATTGGTCGCGGAGCAAGAGTGTCAAGAACAGGTACAGCAATGT GAGGCAGCACTGCAAGCGGCCAAGGCCCAGAACGACTTGGCGGAGACGCG TATCCTGGAATGGCAAGCCAAGCTGAACCAGCTTGAGGCTCTGGGGGTGG CCGAACGAGAGGTGATGGAGGTGGACGACTTACGTTCTGCCACGGCACAG GACGAGATCGAGACGCTCGGTGAGGCAGCGCGGCTCCGCAAGCAGGCAGA GACGCTGTGCGCGGTGCTGGATATGTTACAAGGCCTATACCGCGTGACGG TGACGGTGCTGGACGAAGCCGAGGCGGGGCCGAGCGATATGGTCCTCCGG CTGGCATATCCCTCCAAGCACGCCCTAGAGATGACGCTTTCGATGAGGGG TCAAGCGATCCAGCTGCTGCATGCTCGTCTGGAGATGCCCCTCATGCAGC AACGGCGGAAGTCGGTGGCCACGGCTGAGGCGCAGCGCCTGATGATGAAT CAGGTGGACAACCTCGTAACAGTAGCGCAAGGCTTGCCAGCACCCCAGGA CCTTCTGTTCCTGGCGCGGGAGGTGGGCTGGATGGTTGCTTCGCGGGGCG TTGCGAAACAGGAGATCCGCGAGCTTATGAAAAGGTACATCGTCAAACAC AACGAGGGCATGGATGAGCTGACGGTCACATTCGCCGAGGGCGTTGTCGC CTCCTTCTCCCTTCTGTCCGGCTACCCTAATATGCCGGGCAGTGTACGCA TCGCGGGCTTGGTGGGCGTGGGCGGCTGGAAGGACTGCGAGCTGGCTGTC ACGAGCCGCTGCTTGAATGGGCTGGGCTTGGACTCACTGACGGCCTTGAT TGATGCCCTGCACGAGCGCATCGTGGAGCTGGACAAGAAAGCTGAGTAA back to top
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