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Properties
| Property Name | Value |
|---|
| TranscriptId | 576019 |
| Track | FilteredModels2 |
| ProteinId | 575933 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:70777..72066 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_22 ID=mRNA_22|Name=jgi.p|Nanoce1779_2|575933|organism=Nannochloropsis oceanica|type=mRNA|length=1016bp
GGCCTTCTTCATGCGCACGCTAGACGGATGCATGTTTAGAAGGGCACAGA
CGAGAGGTGGGGTGGGGAGGTTATGGGTTGTAACACGGGAGTTAAAGTCA
AAGCGGCGCCTTTACCTCACGCCTGCATTTGCACCGTGTGTATGCCACGC
TTGGTTGTGAATATGTTGTATTCCATGCACTGCGATTGGTTTTCCGTGCG
GTCGGGCAACAAGATGAGAGGCTCGCTGCGAGTCTCGGCGAGCCTTCCCA
TGCGGCGTCTTGCTTTTTCCATATATCACGTCCAACTACAGACCCCCTCT
TCCAAATATTCCCTACATTCGTGTCACTCATAGGCAGACCAGCTGTAAGT
GCACGTATTATTCGCAGAGCTTGGAATGGCAGCAGCAACCCAGAAGAAAG
TGCTCGTCCCCGTTGCGGACGGCTCGGAAGAGATCGAATCTGTGACCATC
ATCGATGTTCTCGTGCGCGCTGGCGCGACCGTCACCGTCGCCTCCGTCAT
GCCCTCCTCCGCGTCCCCTTCCTCCTCCTCCTCCCCTGTCAACAAGCACC
AGGTGACCTGCTCCCGCGGTGTAAAGCTCGTGGCCGACAAGGGCATCGAC
GACTGCCTTGAGCAGGAGTGGGACCTCATTGCTTGCCCTGGCGGGCTTCC
GGGTGCGGAATATCTGCGTGATTCTTCCTCTCTCCTCACCCTCCTGACGA
AGCAAGAGGCTTCCAAAAAATACATCGCTGCTATATGTGCTTCGCCTGCC
ATGGTCTTACAGACCCACGGGTTCTTAAAAGGCAGGTCCGCCACGTGTTT
CCCCGCGGAGCGGTTCACGACGACGCTGGAGAAGTACCAAGGGAAGGACG
GAGGGGCGGTGGTGGTCGATGGGCATGTGGTGACAAGTCGGGGCCCGGGG
ACGACGATGGTCTTTGCCTTAAAGTTGGTCGAGCTTTTGTTTGGCATGGA
TAAGGCAAAGGAGGTGGCAGGGGGGCTGCTGGTTACCTACCCGGAGGAAG
GGTAGAGAGGGAGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|575933 >mRNA_22-protein ID=mRNA_22-protein|Name=jgi.p|Nanoce1779_2|575933|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MAAATQKKVLVPVADGSEEIESVTIIDVLVRAGATVTVASVMPSSASPSS
SSSPVNKHQVTCSRGVKLVADKGIDDCLEQEWDLIACPGGLPGAEYLRDS
SSLLTLLTKQEASKKYIAAICASPAMVLQTHGFLKGRSATCFPAERFTTT
LEKYQGKDGGAVVVDGHVVTSRGPGTTMVFALKLVELLFGMDKAKEVAGG
LLVTYPEEG* back to topmRNA from alignment at scaffold_3:70777..72066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_22 ID=mRNA_22|Name=jgi.p|Nanoce1779_2|575933|organism=Nannochloropsis oceanica|type=mRNA|length=1290bp|location=Sequence derived from alignment at scaffold_3:70777..72066- (Nannochloropsis oceanica)
GGCCTTCTTCATGCGCACGCTAGACGGATGCATGTTTAGAAGGGCACAGA
CGAGAGGTGGGGTGGGGAGGTTATGGGTTGTAACACGGGAGTTAAAGTCA
AAGCGGCGCCTTTACCTCACGCCTGCATTTGCACCGTGTGTATGCCACGC
TTGGTTGTGAATATGTTGTATTCCATGCACTGCGATTGGTTTTCCGTGCG
GTCGGGCAACAAGATGAGAGGCTCGCTGCGAGTCTCGGCGAGCCTTCCCA
TGCGGCGTCTTGCTTTTTCCATATATCACGTCCAACTACAGACCCCCTCT
TCCAAATATTCCCTACATTCGTGTCACTCATAGGCAGACCAGCTGTAAGT
GCACGTATTATTCGCAGAGCTTGGAATGGCAGCAGGTAAGGTCAACCTCC
TCACCCCACATAACGCTTTCCCCCGGTCGCTCCCTCACTTCCTTTGCTTC
CCTTTCCCGCACGCTCTCATTCAGTTTTCTTCTCCATTCCAACCACTGAT
ACATGACGACATTTTGCTTCTCTGCCCTCTTCATCACCATGCTCTGTCTC
TCCACCTTTCTTCCACGTACCACCACTGCCTTTCTCCTTCGTTCCTCCTC
CTCGTCATCCCTCCGCCCGACCTTTCACCGCCGCTTCTCCTCCTCTTCAA
CCCCTGCAGCAACCCAGAAGAAAGTGCTCGTCCCCGTTGCGGACGGCTCG
GAAGAGATCGAATCTGTGACCATCATCGATGTTCTCGTGCGCGCTGGCGC
GACCGTCACCGTCGCCTCCGTCATGCCCTCCTCCGCGTCCCCTTCCTCCT
CCTCCTCCCCTGTCAACAAGCACCAGGTGACCTGCTCCCGCGGTGTAAAG
CTCGTGGCCGACAAGGGCATCGACGACTGCCTTGAGCAGGAGTGGGACCT
CATTGCTTGCCCTGGCGGGCTTCCGGGTGCGGAATATCTGCGTGATTCTT
CCTCTCTCCTCACCCTCCTGACGAAGCAAGAGGCTTCCAAAAAATACATC
GCTGCTATATGTGCTTCGCCTGCCATGGTCTTACAGACCCACGGGTTCTT
AAAAGGCAGGTCCGCCACGTGTTTCCCCGCGGAGCGGTTCACGACGACGC
TGGAGAAGTACCAAGGGAAGGACGGAGGGGCGGTGGTGGTCGATGGGCAT
GTGGTGACAAGTCGGGGCCCGGGGACGACGATGGTCTTTGCCTTAAAGTT
GGTCGAGCTTTTGTTTGGCATGGATAAGGCAAAGGAGGTGGCAGGGGGGC
TGCTGGTTACCTACCCGGAGGAAGGGTAGAGAGGGAGGGG back to topCoding sequence (CDS) from alignment at scaffold_3:70777..72066- >mRNA_22 ID=mRNA_22|Name=jgi.p|Nanoce1779_2|575933|organism=Nannochloropsis oceanica|type=CDS|length=1260bp|location=Sequence derived from alignment at scaffold_3:70777..72066- (Nannochloropsis oceanica)
CAACCCAGAAGAAAGTGCTCGTCCCCGTTGCGGACGGCTCGGAAGAGATC
GAATCTGTGACCATCATCGATGTTCTCGTGCGCGCTGGCGCGACCGTCAC
CGTCGCCTCCGTCATGCCCTCCTCCGCGTCCCCTTCCTCCTCCTCCTCCC
CTGTCAACAAGCACCAGGTGACCTGCTCCCGCGGTGTAAAGCTCGTGGCC
GACAAGGGCATCGACGACTGCCTTGAGCAGGAGTGGGACCTCATTGCTTG
CCCTGGCGGGCTTCCGGGTGCGGAATATCTGCGTGATTCTTCCTCTCTCC
TCACCCTCCTGACGAAGCAAGAGGCTTCCAAAAAATACATCGCTGCTATA
TGTGCTTCGCCTGCCATGGTCTTACAGACCCACGGGTTCTTAAAAGGCAG
GTCCGCCACGTGTTTCCCCGCGGAGCGGTTCACGACGACGCTGGAGAAGT
ACCAAGGGAAGGACGGAGGGGCGGTGGTGGTCGATGGGCATGTGGTGACA
AGTCGGGGCCCGGGGACGACGATGGTCTTTGCCTTAAAGTTGGTCGAGCT
TTTGTTTGGCATGGATAAGGCAAAGGAGGTGGCAGGGGGGCTGCTGGTTA
CCTACCCGGAGGAAGGGTAGATGGCAGCAGCAACCCAGAAGAAAGTGCTC
GTCCCCGTTGCGGACGGCTCGGAAGAGATCGAATCTGTGACCATCATCGA
TGTTCTCGTGCGCGCTGGCGCGACCGTCACCGTCGCCTCCGTCATGCCCT
CCTCCGCGTCCCCTTCCTCCTCCTCCTCCCCTGTCAACAAGCACCAGGTG
ACCTGCTCCCGCGGTGTAAAGCTCGTGGCCGACAAGGGCATCGACGACTG
CCTTGAGCAGGAGTGGGACCTCATTGCTTGCCCTGGCGGGCTTCCGGGTG
CGGAATATCTGCGTGATTCTTCCTCTCTCCTCACCCTCCTGACGAAGCAA
GAGGCTTCCAAAAAATACATCGCTGCTATATGTGCTTCGCCTGCCATGGT
CTTACAGACCCACGGGTTCTTAAAAGGCAGGTCCGCCACGTGTTTCCCCG
CGGAGCGGTTCACGACGACGCTGGAGAAGTACCAAGGGAAGGACGGAGGG
GCGGTGGTGGTCGATGGGCATGTGGTGACAAGTCGGGGCCCGGGGACGAC
GATGGTCTTTGCCTTAAAGTTGGTCGAGCTTTTGTTTGGCATGGATAAGG
CAAAGGAGGTGGCAGGGGGGCTGCTGGTTACCTACCCGGAGGAAGGGTAG
ATGGCAGCAG back to top
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