jgi.p|Nanoce1779_2|624749, mRNA_217 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|624749
Unique Name	mRNA_217
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4718
Alignment location	scaffold_3:548636..553849 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	624835
Track	FilteredModels2
ProteinId	624749

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_3	supercontig	scaffold_3:548636..553849 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|624749	gene_217	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|624749	mRNA_217-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_217	CDS_217	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_3:548636..553849+
coding sequence from alignment at scaffold_3:548636..553849+

mRNA sequence

>mRNA_217 ID=mRNA_217|Name=jgi.p|Nanoce1779_2|624749|organism=Nannochloropsis oceanica|type=mRNA|length=4718bp
AAAACTATGCGTGAATGTAAGGGGGAGGCGGTAACGTGAGCATCATTAAT
GTAGGAATAGAAGGATTGACCCGAGAAAAGGTATCTATCCCCCAGAGCCG
AGGCATGACTCATCATACTACTGTCTTCGTCGGTGACAAGTGAATGACCG
TCGTAAACGTCCGGACACCGCCACCCCTGCACGCGTTACACCTCAACCCT
GTTGAGTCCCCACTTATTGTCCTACACACTACAGTCATAGCCTGAATAGC
CCGCAGCCTATCTTGAGAGAGCAATAAGCCAAGGAAGTACCCACCGCCCC
ATATTCCTCTCATCCGAGCACAAGGATGAACGACAGCAGCAGCAGCAGCA
GCACCAGCAAGCGGCGGCGCCAGGAAGTGGACGAGGAGGACGAAAAGCTT
AAGGCCCTTCTGCAAAGTTCGGACGACTACGTCCCATACGTGTCGTTTAA
GCAGCGCCAGCGCAAATGCCAACCCAGCAACGGCGGCGAGCTGCATAACA
TCGGAGGTGCCCGGGAGGAGCAAAAGGGCCTCGGCGACCATCCTCAGGGC
AACGGCGCAAAGGATAACAGACGCATGAATATAAGTGGTGCAGATGTAAC
GACGGTAATGTCAGTCCTGGACGCGGAGCTCGCGGACGCCAAGCGAAGCT
TGTTGGACGTGACAGATGAGATGAAAAAGAAGCGAGAGCACATGGACCCT
ACCCTCATCAAGATGGAGCTACAAAAGCAGCAAGAGCTGCGCATATTGGG
AGAAGCTAACCAAGTGCAGACCAATGCCTTGCAATCAGCAGCAGAACGGG
CACAAGGTTTCAGGTACACGGAAAGTCTCAAGACTGGGTGGACGCCCCCC
TCGCACATCCGCGCCATGACCGCCGAGGATTGTGCGACGTTCCGGAAAAA
ATGGCACATCATTTGCGAAGGCGTTGACTTGCCGCCTCCCATCAAGAACT
TCAAGGACATGCGCTTCCCTGAGCCCATCATGAACGCGCTGGCTAAGAAG
GGCATTGCCAAGCCTACCCCCATCCAGGTGCAGGGCCTCCCCGTGCTCTT
GAGCGGACGTGACATGGTGGGCATTGCCTTTACGGGCTCAGGGAAGACCA
TGACCTTTGGCTTACCCCTCGTAATGCTGGCGCTGGCAGAGGAGAAGAAG
ATGCCGCTGGAAGGGGGTGAGGGTCCGATTGGGGTCATTCTCTGTCCGTC
ACGCGAGTTGGCAGGGCAGACGTTCGAGGTGCTTGACTTCTACTGCGAGG
CCTTGGGACAGGGGGGGTTTCCTCGGCCCAGGGCGTTATTGTGCATCGGT
GGGATGGACAAGCGGGCGCAGATTGATGCGGTGCAACGACAGGGGGTACA
TATCGTAGTTGCAACCCCGGGGAGGTTGCGAGATCTGTTGCAGTTGAAGA
AGATGAACCTAAACCTGTGCCGGTACTTTTGCTTGGATGAAGCGGACAGG
ATGTTGGACCTGGGCTTTGATGAGGAGGTAGCGGAGATCATGAACCATTT
TAAGCAACAACGCCAGACGCTGCTGTTCTCGGCGACGATGCCTCAGAAGA
TCCAGGACTTTGCCAAGCAGACATTGGTGCGCCCGGTCCTGGTGAACGTC
GGTCGGGCAGGGGCGGCCAATTTGGACGTCGTACAAGAGGTGGAGCTTGT
CAAAAAGGACGCTAAGATTGTCTACTTGTTGCAATGCTTGCAGAAGACAG
CGCCGCCCGTGATGATTTTCTGTGAGCGGAAAAGTGATGTAGACAACATT
CACGAGTATCTACTCCTCAAAGGAGTGGACGCGGTGGCCATCCATGGAAG
CAAAGACCAAACCGAACGTGATGAGGCCATCAGGGAATTTAAAAGTGGTT
TCAAAGATGTTTTGGTCGCCACAGATGTCGCGGCCAAGGGATTGGATTTC
CCAAACATCGAGCATGTGATCAATTTTGACATGCCTCATGAGATTGAAAA
TTACGTACATCGCATCGGTCGAACCGGTCGTTGCGGAAAGACAGGTGTGG
CCACCACGTTTATCAACGCCGAAGTCGAGCAGAGTACCTTGCTTGATTTG
AAGCATCTGCTGATTGAGGCGAGGCAACGGGTGCCTCCTGTTTTGGAAGC
GCTGGAGGATCCGGACGCAGATTTAACGGGGGCTATTGATGGGGTGAGGG
GGTGTGCGTTCTGCGGGGGCTTGGGGCACCGAATTACGGATTACTGCAAA
GTCGATTCGCTGATTAAACTGAATGGCACTTCGTGGTTGCGCAGCGAGGG
TGTTGACATCCACGAAAAGGTGCGGAACAGCCGCCGCACATACATAGTCA
GCGGTGGTGCGCCCATCGATATCCTCATCATTCGCCAGAGCCCCATGCAG
GAAGTGTAAAGCGAGCATATCGTGTATAATGTACAGCTAAACGGATCGTT
TCAGGCAAGGAAGAACGGTCAATAGCAAATAAGAGGGTTTATGCCAATCA
GGAAATGCGGTCGTCAACGCTAGAAGGACAATCGGCAGGGGCCGCAGAGA
AACCATTATGGTTATGTTGGTGGTCCTTGACTTGCCTGGTAAAAATCTTT
ATATGTGGGGTTGCACCTACGCAGTGCGAAGTCGATTTCTTAAGTGTTGC
TCGAGCTTTGACTGATGCTCCTTTTCTCAGGCAAGGGATGGGGAGTAAAT
TATGCCACCTAGACTCGATACGGGAGCAAGCAAGGTTCTGTCACTGGCCG
CTAGATTAGTGCGCATTCACGCGTGCGTGGTCGTGTTGAAGGTGCCTTGT
GCTACTGAAGGCTTGAGACCTCGTTTCGCTCACGGGCACAAGGGGACCAA
CATCTTGGAAGGGGTTACGGACGCATGTTTTAGCGAAGTGCATCGGAGCG
TAGCACAGCCCGTTAGGCAGGAAACTCTCAGGCCCTCGCTGACCGGGCCC
TGACGGGACTATCCGCCCCGCAAAATTTCAAGATACTTCCATAGAAAAGA
ATTAAGATATACGTGTTGGGTACATAATCGTAAATTGGTAAGAAAACATG
GCAGGTGAGGACTGAATGTTTAGATGGCCGTCCTTTGCTTTGCCGTCCTT
TGCTTTTCTCGCGCGCTGCATAATTTCAGAGTGATCTTGCGTGGCGATTG
CGCCGACCTCCTAAATAAAGGACACTTTTTTACCTTAGCTCACATCTTAA
CCCCTACCCTGGACACAATCACAGCGCCCACCAGCATGCGGGCCCTTTTG
CTTTTGGTGGTCTCCGCGTGCTTGGCCACCGCTTTTTTGCAGCCACACTT
CTCGTCCTTCGAGGGACGCAGCATCCACAGCCGCAGCATCAGGAGGGGAG
GGTTAATCGTGGCGGCTGCAGACGGTGTCTATGGAGAGTCATCAGAAGAG
CTAGAAAAGCTGCGTTTTCTGACTCCCGAGCTAGTTGAGGCAGTTGCGAA
TGAATTTGGCACTCCCACCTACGTGTACGACATGAGCACGCTCACCGCTA
GCGCCAAGCAGGCCCTGGCGTTTCCCAACGCGTTTGGCCTGACAGTGCGG
TACGCGATGAAGGCCAGCCCTAACGCCGCCATCCTGAAGCTATTTAATAG
CCTGGGTTTGCATGTGGATGCTTCGTCGGGCTATGAGATCAAGCGGGCCA
TGCGAGCTGGCGTGCCACCGTCGCACATCAGTTTGTCGTCGCAAGAGCTG
CCGTCTGATTTTGACGAGTACGTGGCGCAGGGCGTGCAGATCAATGCCTG
CTCCATCTCACAGCTGAAGCGTTTCGGGCAAAAGTGTCCAGGAGGGAAGG
TGGGCCTACGCTTCAACCCCGGCGTGGGCTCAGGCGGCACCGGCAAGACG
AATGTGGGGGGTCCTTCGTCTGCCTTCGGGATATGGCACGAGTTGCTCCC
CGAGGTCAAGGCGGTAGTGGCCACGCACGACCTAGAGGTGGTACGCATCC
ATACCCACATTGGCTCGGGCTCTGATCCGGCCGTGTGGCAGAATGTGGCA
ACGTTGTCCTTGGATCTGGTGCGGGAGTTTCCCAAGGTGATGACTCTGAA
TCTGGGGGGGGGCTACAAGGTAGGTCGCATGAGCTATGAGGCTTCGACAG
ACTTGCTTAAGATTGGCGCGCCCGTGCAGAAGAAGTTCGAGGACTTTGCA
CAAGAGACGGGCCGAAAGCTCCATTTGGAAGTGGAGCCGGGCACATTTTT
GGTGGCCAATGCCGGGGCTTTGGTGTGTGCTATTCAGGACAAGACTACCA
CCAGCGCGCACACTTTCCTGAAGTTGGACGCGGGTATGACCGAGGTCCTG
CGCCCTTCCTTGTATGGGGCGCAACACCCGTTGATTGTGATTCCCAAGGA
CAAGACCCGGGCTGAGCAGACAGCATCGTATGTGGTGGTGGGCCACTGCT
GCGAGTCGGGGGATTTGCTCACGCCTGCGCCAGGAGAGGCCGACACGATT
GCCGAGCGGAAGATGACGGTGGCTGACATTGGGGACTTGGTGGTGGTGGA
AGGCTCGGGAGCCTACTGTGCGGGAATGAGCACCAAAAACTATAACTCCT
TTCCGGAAGCTCCCGAGGTGATGTATGCGTCTGGTGGCATTTTCCACCTC
ATCCGCCGGCGGCAGACACTGGATCAGACCCTTCAAAATGAGCTTGATTT
GCCTGCCAGCGCACTTTCTTGACAGCATTAGAGCTTGGAGAACGTGAATA
TGTTCTTTTGTTGTGTTCGCCAATCTATAGCAAAGAAAATTAAATGACAA
GCTACTGGCTCGGGATAC

protein sequence of jgi.p|Nanoce1779_2|624749

>mRNA_217-protein ID=mRNA_217-protein|Name=jgi.p|Nanoce1779_2|624749|organism=Nannochloropsis oceanica|type=polypeptide|length=678bp
MNDSSSSSSTSKRRRQEVDEEDEKLKALLQSSDDYVPYVSFKQRQRKCQP
SNGGELHNIGGAREEQKGLGDHPQGNGAKDNRRMNISGADVTTVMSVLDA
ELADAKRSLLDVTDEMKKKREHMDPTLIKMELQKQQELRILGEANQVQTN
ALQSAAERAQGFRYTESLKTGWTPPSHIRAMTAEDCATFRKKWHIICEGV
DLPPPIKNFKDMRFPEPIMNALAKKGIAKPTPIQVQGLPVLLSGRDMVGI
AFTGSGKTMTFGLPLVMLALAEEKKMPLEGGEGPIGVILCPSRELAGQTF
EVLDFYCEALGQGGFPRPRALLCIGGMDKRAQIDAVQRQGVHIVVATPGR
LRDLLQLKKMNLNLCRYFCLDEADRMLDLGFDEEVAEIMNHFKQQRQTLL
FSATMPQKIQDFAKQTLVRPVLVNVGRAGAANLDVVQEVELVKKDAKIVY
LLQCLQKTAPPVMIFCERKSDVDNIHEYLLLKGVDAVAIHGSKDQTERDE
AIREFKSGFKDVLVATDVAAKGLDFPNIEHVINFDMPHEIENYVHRIGRT
GRCGKTGVATTFINAEVEQSTLLDLKHLLIEARQRVPPVLEALEDPDADL
TGAIDGVRGCAFCGGLGHRITDYCKVDSLIKLNGTSWLRSEGVDIHEKVR
NSRRTYIVSGGAPIDILIIRQSPMQEV*

mRNA from alignment at scaffold_3:548636..553849+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_217 ID=mRNA_217|Name=jgi.p|Nanoce1779_2|624749|organism=Nannochloropsis oceanica|type=mRNA|length=5214bp|location=Sequence derived from alignment at scaffold_3:548636..553849+ (Nannochloropsis oceanica)
AAAACTATGCGTGAATGTAAGGGGGAGGCGGTAACGTGAGCATCATTAAT
GTAGGAATAGAAGGATTGACCCGAGAAAAGGTATCTATCCCCCAGAGCCG
AGGCATGACTCATCATACTACTGTCTTCGTCGGTGACAAGTGAATGACCG
TCGTAAACGTCCGGACACCGCCACCCCTGCACGCGTTACACCTCAACCCT
GTTGAGTCCCCACTTATTGTCCTACACACTACAGTCATAGCCTGAATAGC
CCGCAGCCTATCTTGAGAGAGCAATAAGCCAAGGAAGTACCCACCGCCCC
ATATTCCTCTCATCCGAGCACAAGGATGAACGACAGCAGCAGCAGCAGCA
GCACCAGCAAGCGGCGGCGCCAGGAAGTGGACGAGGAGGACGAAAAGCTT
AAGGCCCTTCTGCAAAGTTCGGACGACTACGTCCCATACGTGTCGTTTAA
GCAGCGCCAGCGCAAATGCCAACCCAGCAACGGCGGCGAGCTGCATAACA
TCGGAGGTGCCCGGGAGGAGCAAAAGGGCCTCGGCGACCATCCTCAGGGC
AACGGCGCAAAGGATAACAGACGCATGAATATAAGTGGTGCAGATGTAAC
GACGGTAATGTCAGTCCTGGACGCGGAGCTCGCGGACGCCAAGCGAAGCT
TGTTGGACGTGACAGATGAGATGAAAAAGAAGCGAGAGCACATGGACCCT
ACCCTCATCAAGATGGAGCTACAAAAGCAGCAAGAGCTGCGCATATTGGG
AGAAGCTAACCAAGTGCAGACCAATGCCTTGCAATCAGCAGCAGAACGGG
CACAAGGTTTCAGGTACACGGAAAGTCTCAAGACTGGGTGGACGCCCCCC
TCGCACATCCGCGCCATGACCGCCGAGGATTGTGCGACGTTCCGGAAAAA
ATGGCACATCATTTGCGAAGGCGTTGACTTGCCGCCTCCCATCAAGAACT
TCAAGGACATGCGCTTCCCTGAGCCCATCATGAACGCGCTGGCTAAGAAG
GGCATTGCCAAGCCTACCCCCATCCAGGTGCAGGGCCTCCCCGTGCTCTT
GAGCGGACGTGACATGGTGGGCATTGCCTTTACGGGCTCAGGGAAGACCA
TGACCTTTGGCTTACCCCTCGTAATGCTGGCGCTGGCAGAGGAGAAGAAG
ATGCCGCTGGAAGGGGGTGAGGGTCCGATTGGGGTCATTCTCTGTCCGTC
ACGCGAGTTGGCAGGGCAGACGTTCGAGGTGCTTGACTTCTACTGCGAGG
CCTTGGGACAGGGGGGGTTTCCTCGGCCCAGGGCGTTATTGTGCATCGGT
GGGATGGACAAGCGGGCGCAGATTGATGCGGTGCAACGACAGGGGGTACA
TATCGTAGTTGCAACCCCGGGGAGGTTGCGAGATCTGTTGCAGTTGAAGA
AGATGAACCTAAACCTGTGCCGGTACTTTTGCTTGGATGAAGCGGACAGG
ATGTTGGACCTGGGCTTTGATGAGGAGGTAGCGGAGATCATGAACCATTT
TAAGCAACAACGCCAGACGCTGCTGTTCTCGGCGACGATGCCTCAGAAGA
TCCAGGACTTTGCCAAGCAGACATTGGTGCGCCCGGTCCTGGTGAACGTC
GGTCGGGCAGGGGCGGCCAATTTGGACGTCGTACAAGAGGTGGAGCTTGT
CAAAAAGGACGCTAAGATTGTCTACTTGTTGCAATGCTTGCAGAAGACAG
CGCCGCCCGTGATGATTTTCTGTGAGCGGAAAAGTGATGTAGACAACATT
CACGAGTATCTACTCCTCAAAGGAGTGGACGCGGTGGCCATCCATGGAAG
CAAAGACCAAACCGAACGTGATGAGGCCATCAGGGAATTTAAAAGTGGTT
TCAAAGATGTTTTGGTCGCCACAGATGTCGCGGCCAAGGGATTGGATTTC
CCAAACATCGAGCATGTGATCAATTTTGACATGCCTCATGAGATTGAAAA
TTACGTACATCGCATCGGTCGAACCGGTCGTTGCGGAAAGACAGGTGTGG
CCACCACGTTTATCAACGCCGAAGTCGAGCAGAGTACCTTGCTTGATTTG
AAGCATCTGCTGATTGAGGCGAGGCAACGGGTGCCTCCTGTTTTGGAAGC
GCTGGAGGATCCGGACGCAGATTTAACGGGGGCTATTGATGGGGTGAGGG
GGTGTGCGTTCTGCGGGGGCTTGGGGCACCGAATTACGGATTGTCCGAAG
ATCGACAAGGATGCAAGGCGATTAGGAACGGGGAGACGGGATATGCTTAT
CTCGTCGGGCGGGTATGGAGGGGAGTATTAGTTTTCCAGTCGGAGGGAGA
CGCGTAACTGGGTGGGGTTTGTGTCAATATGGGCGGATGTACATATCAGA
GAAAGAGATGAAAGCAAATGTACACGCAGAATAGTAGGGTGACCTATATC
TGTCCGGTGCGTATTTTAATTTCTTTTGTTAGATTGAGTCACTCTTACGG
GCGAGCTTCACGTTTCGGTCATGCGTTTTCTCTTTACTCTTTCCCCAAAA
CAAAATTTACGAACCCTTCATTTTGGCAACGCTGCCTAGGAGGATTACAA
ATGGTCGGCTTCCATTCTTCAAGAGGCTCGCATCATCTATTTTATTCCCT
TTAGAATAGTAGTAACTAATGCCAGCAGGTCACGTTCGCACTCAGAGCCA
CGGTTTTCCCTACGCTGAGTAGATCTGCAGTGCTCCAGACTGCAAAGTCG
ATTCGCTGATTAAACTGAATGGCACTTCGTGGTTGCGCAGCGAGGGTGTT
GACATCCACGAAAAGGTGCGGAACAGCCGCCGCACATACATAGTCAGCGG
TGGTGCGCCCATCGATATCCTCATCATTCGCCAGAGCCCCATGCAGGAAG
TGTAAAGCGAGCATATCGTGTATAATGTACAGCTAAACGGATCGTTTCAG
GCAAGGAAGAACGGTCAATAGCAAATAAGAGGGTTTATGCCAATCAGGAA
ATGCGGTCGTCAACGCTAGAAGGACAATCGGCAGGGGCCGCAGAGAAACC
ATTATGGTTATGTTGGTGGTCCTTGACTTGCCTGGTAAAAATCTTTATAT
GTGGGGTTGCACCTACGCAGTGCGAAGTCGATTTCTTAAGTGTTGCTCGA
GCTTTGACTGATGCTCCTTTTCTCAGGCAAGGGATGGGGAGTAAATTATG
CCACCTAGACTCGATACGGGAGCAAGCAAGGTTCTGTCACTGGCCGCTAG
ATTAGTGCGCATTCACGCGTGCGTGGTCGTGTTGAAGGTGCCTTGTGCTA
CTGAAGGCTTGAGACCTCGTTTCGCTCACGGGCACAAGGGGACCAACATC
TTGGAAGGGGTTACGGACGCATGTTTTAGCGAAGTGCATCGGAGCGTAGC
ACAGCCCGTTAGGCAGGAAACTCTCAGGCCCTCGCTGACCGGGCCCTGAC
GGGACTATCCGCCCCGCAAAATTTCAAGATACTTCCATAGAAAAGAATTA
AGATATACGTGTTGGGTACATAATCGTAAATTGGTAAGAAAACATGGCAG
GTGAGGACTGAATGTTTAGATGGCCGTCCTTTGCTTTGCCGTCCTTTGCT
TTTCTCGCGCGCTGCATAATTTCAGAGTGATCTTGCGTGGCGATTGCGCC
GACCTCCTAAATAAAGGACACTTTTTTACCTTAGCTCACATCTTAACCCC
TACCCTGGACACAATCACAGCGCCCACCAGCATGCGGGCCCTTTTGCTTT
TGGTGGTCTCCGCGTGCTTGGCCACCGCTTTTTTGCAGCCACACTTCTCG
TCCTTCGAGGGACGCAGCATCCACAGCCGCAGCATCAGGAGGGGAGGGTT
AATCGTGGCGGCTGCAGACGGTGTCTATGGAGAGTCATCAGAAGAGCTAG
AAAAGCTGCGTTTTCTGACTCCCGAGCTAGTTGAGGCAGTTGCGAATGAA
TTTGGCACTCCCACCTACGTGTACGACATGAGCACGCTCACCGCTAGCGC
CAAGCAGGCCCTGGCGTTTCCCAACGCGTTTGGCCTGACAGTGCGGTACG
CGATGAAGGCCAGCCCTAACGCCGCCATCCTGAAGCTATTTAATAGCCTG
GGTTTGCATGTGGATGCTTCGTCGGGCTATGAGATCAAGCGGGCCATGCG
AGCTGGCGTGCCACCGTCGCACATCAGTTTGTCGTCGCAAGAGCTGCCGT
CTGATTTTGACGAGTACGTGGCGCAGGGCGTGCAGATCAATGCCTGCTCC
ATCTCACAGCTGAAGCGTTTCGGGCAAAAGTGTCCAGGAGGGAAGGTGGG
CCTACGCTTCAACCCCGGCGTGGGCTCAGGCGGCACCGGCAAGACGAATG
TGGGGGGTCCTTCGTCTGCCTTCGGGATATGGCACGAGTTGCTCCCCGAG
GTCAAGGCGGTAGTGGCCACGCACGACCTAGAGGTGGTACGCATCCATAC
CCACATTGGCTCGGGCTCTGATCCGGCCGTGTGGCAGAATGTGGCAACGT
TGTCCTTGGATCTGGTGCGGGAGTTTCCCAAGGTGATGACTCTGAATCTG
GGGGGGGGCTACAAGGTAGGTCGCATGAGCTATGAGGCTTCGACAGACTT
GCTTAAGATTGGCGCGCCCGTGCAGAAGAAGTTCGAGGACTTTGCACAAG
AGACGGGCCGAAAGCTCCATTTGGAAGTGGAGCCGGGCACATTTTTGGTG
GCCAATGCCGGGGCTTTGGTGTGTGCTATTCAGGACAAGACTACCACCAG
CGCGCACACTTTCCTGAAGTTGGACGCGGGTATGACCGAGGTCCTGCGCC
CTTCCTTGTATGGGGCGCAACACCCGTTGATTGTGATTCCCAAGGACAAG
ACCCGGGCTGAGCAGACAGCATCGTATGTGGTGGTGGGCCACTGCTGCGA
GTCGGGGGATTTGCTCACGCCTGCGCCAGGAGAGGCCGACACGATTGCCG
AGCGGAAGATGACGGTGGCTGACATTGGGGACTTGGTGGTGGTGGAAGGC
TCGGGAGCCTACTGTGCGGGAATGAGCACCAAAAACTATAACTCCTTTCC
GGAAGCTCCCGAGGTGATGTATGCGTCTGGTGGCATTTTCCACCTCATCC
GCCGGCGGCAGACACTGGATCAGACCCTTCAAAATGAGCTTGATTTGCCT
GCCAGCGCACTTTCTTGACAGCATTAGAGCTTGGAGAACGTGAATATGTT
CTTTTGTTGTGTTCGCCAATCTATAGCAAAGAAAATTAAATGACAAGCTA
CTGGCTCGGGATAC

Coding sequence (CDS) from alignment at scaffold_3:548636..553849+

>mRNA_217 ID=mRNA_217|Name=jgi.p|Nanoce1779_2|624749|organism=Nannochloropsis oceanica|type=CDS|length=4068bp|location=Sequence derived from alignment at scaffold_3:548636..553849+ (Nannochloropsis oceanica)
ATGAACGACAGCAGCAGCAGCAGCAGCACCAGCAAGCGGCGGCGCCAGGA
AGTGGACGAGGAGGACGAAAAGCTTAAGGCCCTTCTGCAAAGTTCGGACG
ACTACGTCCCATACGTGTCGTTTAAGCAGCGCCAGCGCAAATGCCAACCC
AGCAACGGCGGCGAGCTGCATAACATCGGAGGTGCCCGGGAGGAGCAAAA
GGGCCTCGGCGACCATCCTCAGGGCAACGGCGCAAAGGATAACAGACGCA
TGAATATAAGTGGTGCAGATGTAACGACGGTAATGTCAGTCCTGGACGCG
GAGCTCGCGGACGCCAAGCGAAGCTTGTTGGACGTGACAGATGAGATGAA
AAAGAAGCGAGAGCACATGGACCCTACCCTCATCAAGATGGAGCTACAAA
AGCAGCAAGAGCTGCGCATATTGGGAGAAGCTAACCAAGTGCAGACCAAT
GCCTTGCAATCAGCAGCAGAACGGGCACAAGGTTTCAGGTACACGGAAAG
TCTCAAGACTGGGTGGACGCCCCCCTCGCACATCCGCGCCATGACCGCCG
AGGATTGTGCGACGTTCCGGAAAAAATGGCACATCATTTGCGAAGGCGTT
GACTTGCCGCCTCCCATCAAGAACTTCAAGGACATGCGCTTCCCTGAGCC
CATCATGAACGCGCTGGCTAAGAAGGGCATTGCCAAGCCTACCCCCATCC
AGGTGCAGGGCCTCCCCGTGCTCTTGAGCGGACGTGACATGGTGGGCATT
GCCTTTACGGGCTCAGGGAAGACCATGACCTTTGGCTTACCCCTCGTAAT
GCTGGCGCTGGCAGAGGAGAAGAAGATGCCGCTGGAAGGGGGTGAGGGTC
CGATTGGGGTCATTCTCTGTCCGTCACGCGAGTTGGCAGGGCAGACGTTC
GAGGTGCTTGACTTCTACTGCGAGGCCTTGGGACAGGGGGGGTTTCCTCG
GCCCAGGGCGTTATTGTGCATCGGTGGGATGGACAAGCGGGCGCAGATTG
ATGCGGTGCAACGACAGGGGGTACATATCGTAGTTGCAACCCCGGGGAGG
TTGCGAGATCTGTTGCAGTTGAAGAAGATGAACCTAAACCTGTGCCGGTA
CTTTTGCTTGGATGAAGCGGACAGGATGTTGGACCTGGGCTTTGATGAGG
AGGTAGCGGAGATCATGAACCATTTTAAGCAACAACGCCAGACGCTGCTG
TTCTCGGCGACGATGCCTCAGAAGATCCAGGACTTTGCCAAGCAGACATT
GGTGCGCCCGGTCCTGGTGAACGTCGGTCGGGCAGGGGCGGCCAATTTGG
ACGTCGTACAAGAGGTGGAGCTTGTCAAAAAGGACGCTAAGATTGTCTAC
TTGTTGCAATGCTTGCAGAAGACAGCGCCGCCCGTGATGATTTTCTGTGA
GCGGAAAAGTGATGTAGACAACATTCACGAGTATCTACTCCTCAAAGGAG
TGGACGCGGTGGCCATCCATGGAAGCAAAGACCAAACCGAACGTGATGAG
GCCATCAGGGAATTTAAAAGTGGTTTCAAAGATGTTTTGGTCGCCACAGA
TGTCGCGGCCAAGGGATTGGATTTCCCAAACATCGAGCATGTGATCAATT
TTGACATGCCTCATGAGATTGAAAATTACGTACATCGCATCGGTCGAACC
GGTCGTTGCGGAAAGACAGGTGTGGCCACCACGTTTATCAACGCCGAAGT
CGAGCAGAGTACCTTGCTTGATTTGAAGCATCTGCTGATTGAGGCGAGGC
AACGGGTGCCTCCTGTTTTGGAAGCGCTGGAGGATCCGGACGCAGATTTA
ACGGGGGCTATTGATGGGGTGAGGGGGTGTGCGTTCTGCGGGGGCTTGGG
GCACCGAATTACGGATTACTGCAAAGTCGATTCGCTGATTAAACTGAATG
GCACTTCGTGGTTGCGCAGCGAGGGTGTTGACATCCACGAAAAGGTGCGG
AACAGCCGCCGCACATACATAGTCAGCGGTGGTGCGCCCATCGATATCCT
CATCATTCGCCAGAGCCCCATGCAGGAAGTGTAAATGAACGACAGCAGCA
GCAGCAGCAGCACCAGCAAGCGGCGGCGCCAGGAAGTGGACGAGGAGGAC
GAAAAGCTTAAGGCCCTTCTGCAAAGTTCGGACGACTACGTCCCATACGT
GTCGTTTAAGCAGCGCCAGCGCAAATGCCAACCCAGCAACGGCGGCGAGC
TGCATAACATCGGAGGTGCCCGGGAGGAGCAAAAGGGCCTCGGCGACCAT
CCTCAGGGCAACGGCGCAAAGGATAACAGACGCATGAATATAAGTGGTGC
AGATGTAACGACGGTAATGTCAGTCCTGGACGCGGAGCTCGCGGACGCCA
AGCGAAGCTTGTTGGACGTGACAGATGAGATGAAAAAGAAGCGAGAGCAC
ATGGACCCTACCCTCATCAAGATGGAGCTACAAAAGCAGCAAGAGCTGCG
CATATTGGGAGAAGCTAACCAAGTGCAGACCAATGCCTTGCAATCAGCAG
CAGAACGGGCACAAGGTTTCAGGTACACGGAAAGTCTCAAGACTGGGTGG
ACGCCCCCCTCGCACATCCGCGCCATGACCGCCGAGGATTGTGCGACGTT
CCGGAAAAAATGGCACATCATTTGCGAAGGCGTTGACTTGCCGCCTCCCA
TCAAGAACTTCAAGGACATGCGCTTCCCTGAGCCCATCATGAACGCGCTG
GCTAAGAAGGGCATTGCCAAGCCTACCCCCATCCAGGTGCAGGGCCTCCC
CGTGCTCTTGAGCGGACGTGACATGGTGGGCATTGCCTTTACGGGCTCAG
GGAAGACCATGACCTTTGGCTTACCCCTCGTAATGCTGGCGCTGGCAGAG
GAGAAGAAGATGCCGCTGGAAGGGGGTGAGGGTCCGATTGGGGTCATTCT
CTGTCCGTCACGCGAGTTGGCAGGGCAGACGTTCGAGGTGCTTGACTTCT
ACTGCGAGGCCTTGGGACAGGGGGGGTTTCCTCGGCCCAGGGCGTTATTG
TGCATCGGTGGGATGGACAAGCGGGCGCAGATTGATGCGGTGCAACGACA
GGGGGTACATATCGTAGTTGCAACCCCGGGGAGGTTGCGAGATCTGTTGC
AGTTGAAGAAGATGAACCTAAACCTGTGCCGGTACTTTTGCTTGGATGAA
GCGGACAGGATGTTGGACCTGGGCTTTGATGAGGAGGTAGCGGAGATCAT
GAACCATTTTAAGCAACAACGCCAGACGCTGCTGTTCTCGGCGACGATGC
CTCAGAAGATCCAGGACTTTGCCAAGCAGACATTGGTGCGCCCGGTCCTG
GTGAACGTCGGTCGGGCAGGGGCGGCCAATTTGGACGTCGTACAAGAGGT
GGAGCTTGTCAAAAAGGACGCTAAGATTGTCTACTTGTTGCAATGCTTGC
AGAAGACAGCGCCGCCCGTGATGATTTTCTGTGAGCGGAAAAGTGATGTA
GACAACATTCACGAGTATCTACTCCTCAAAGGAGTGGACGCGGTGGCCAT
CCATGGAAGCAAAGACCAAACCGAACGTGATGAGGCCATCAGGGAATTTA
AAAGTGGTTTCAAAGATGTTTTGGTCGCCACAGATGTCGCGGCCAAGGGA
TTGGATTTCCCAAACATCGAGCATGTGATCAATTTTGACATGCCTCATGA
GATTGAAAATTACGTACATCGCATCGGTCGAACCGGTCGTTGCGGAAAGA
CAGGTGTGGCCACCACGTTTATCAACGCCGAAGTCGAGCAGAGTACCTTG
CTTGATTTGAAGCATCTGCTGATTGAGGCGAGGCAACGGGTGCCTCCTGT
TTTGGAAGCGCTGGAGGATCCGGACGCAGATTTAACGGGGGCTATTGATG
GGGTGAGGGGGTGTGCGTTCTGCGGGGGCTTGGGGCACCGAATTACGGAT
TACTGCAAAGTCGATTCGCTGATTAAACTGAATGGCACTTCGTGGTTGCG
CAGCGAGGGTGTTGACATCCACGAAAAGGTGCGGAACAGCCGCCGCACAT
ACATAGTCAGCGGTGGTGCGCCCATCGATATCCTCATCATTCGCCAGAGC
CCCATGCAGGAAGTGTAA

Synonyms

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