Properties
| Property Name | Value |
|---|
| TranscriptId | 579321 |
| Track | FilteredModels2 |
| ProteinId | 579235 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:894821..895652 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2142 ID=mRNA_2142|Name=jgi.p|Nanoce1779_2|579235|organism=Nannochloropsis oceanica|type=mRNA|length=832bp
CAGCATCCCCCTGTCCCTCATAGACACAGAATTACACATCAAAAAGTATG
GCCACCCTGACAGTCGCCTCCGAATACGGCTACGTTCTAATCGTCGCCGG
TGTCCTCGTCCTCGAAGGCTTCTTTCTCGGAGGCATTGTCATGGGGCTGC
GCAAACAATATTTCAGTAACGAATTCCAGAAGAAGAACCAGGACCTGATG
GATGAGCATAAGAAGGCTTTCCCCACCGTGCCCTTCTCCAGTGGCTATCC
CGACATGGGTTCTGGTCGCTACACAGATCGCTTGAGTTATGAGCAGTGGT
TCCTCTTTAACAACGCGCAGCGTGGACATCAAAACTTTTTGGAATCCGTA
TGGGCCACGATGGCGCTGCTGTTGGTCGGCGGGTTCTTCGAGCCTAAGAT
CTTCGCCAGTTTGGGGGCCGCGTATATTGTGGCGCGTGCACTCTATGCCC
ATGGCTATGCCTCGCACGGCCCTAAAGGACGGGAGGTAGGAGCAGTGGTG
GGATTGCTTTCGTTATTGGGAATGGTGGGCATGTGTATCAAGATTGCTGT
TGCCCTGATCAATGGAGGGAACTAAGGAAAGGGGGAGAAAGAGATAAAGA
GAAAGAGAGAGTGTGTGTGCGTAGGTTGAGAGAGTGTAAAAAAGTTAAGC
AGGAGGCGTAGCCTCTGCGAGTGTTGTGGAAAGACATAGCAGAAGGACGG
AGCAGAGAGAGGGTAAGAGAAAAGCATCAGCCTCAATACTTAGTGTTTTC
TGTTTCTCAAGGCGATGAGACAAGAAGACAGGAGAGTGAGGGAGAGACGA
AAATTCGACTGCTCACATCGACCACATAATAT back to topprotein sequence of jgi.p|Nanoce1779_2|579235 >mRNA_2142-protein ID=mRNA_2142-protein|Name=jgi.p|Nanoce1779_2|579235|organism=Nannochloropsis oceanica|type=polypeptide|length=176bp
MATLTVASEYGYVLIVAGVLVLEGFFLGGIVMGLRKQYFSNEFQKKNQDL
MDEHKKAFPTVPFSSGYPDMGSGRYTDRLSYEQWFLFNNAQRGHQNFLES
VWATMALLLVGGFFEPKIFASLGAAYIVARALYAHGYASHGPKGREVGAV
VGLLSLLGMVGMCIKIAVALINGGN* back to topmRNA from alignment at scaffold_4:894821..895652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2142 ID=mRNA_2142|Name=jgi.p|Nanoce1779_2|579235|organism=Nannochloropsis oceanica|type=mRNA|length=832bp|location=Sequence derived from alignment at scaffold_4:894821..895652- (Nannochloropsis oceanica)
CAGCATCCCCCTGTCCCTCATAGACACAGAATTACACATCAAAAAGTATG
GCCACCCTGACAGTCGCCTCCGAATACGGCTACGTTCTAATCGTCGCCGG
TGTCCTCGTCCTCGAAGGCTTCTTTCTCGGAGGCATTGTCATGGGGCTGC
GCAAACAATATTTCAGTAACGAATTCCAGAAGAAGAACCAGGACCTGATG
GATGAGCATAAGAAGGCTTTCCCCACCGTGCCCTTCTCCAGTGGCTATCC
CGACATGGGTTCTGGTCGCTACACAGATCGCTTGAGTTATGAGCAGTGGT
TCCTCTTTAACAACGCGCAGCGTGGACATCAAAACTTTTTGGAATCCGTA
TGGGCCACGATGGCGCTGCTGTTGGTCGGCGGGTTCTTCGAGCCTAAGAT
CTTCGCCAGTTTGGGGGCCGCGTATATTGTGGCGCGTGCACTCTATGCCC
ATGGCTATGCCTCGCACGGCCCTAAAGGACGGGAGGTAGGAGCAGTGGTG
GGATTGCTTTCGTTATTGGGAATGGTGGGCATGTGTATCAAGATTGCTGT
TGCCCTGATCAATGGAGGGAACTAAGGAAAGGGGGAGAAAGAGATAAAGA
GAAAGAGAGAGTGTGTGTGCGTAGGTTGAGAGAGTGTAAAAAAGTTAAGC
AGGAGGCGTAGCCTCTGCGAGTGTTGTGGAAAGACATAGCAGAAGGACGG
AGCAGAGAGAGGGTAAGAGAAAAGCATCAGCCTCAATACTTAGTGTTTTC
TGTTTCTCAAGGCGATGAGACAAGAAGACAGGAGAGTGAGGGAGAGACGA
AAATTCGACTGCTCACATCGACCACATAATAT back to topCoding sequence (CDS) from alignment at scaffold_4:894821..895652- >mRNA_2142 ID=mRNA_2142|Name=jgi.p|Nanoce1779_2|579235|organism=Nannochloropsis oceanica|type=CDS|length=528bp|location=Sequence derived from alignment at scaffold_4:894821..895652- (Nannochloropsis oceanica)
ATGGCCACCCTGACAGTCGCCTCCGAATACGGCTACGTTCTAATCGTCGC
CGGTGTCCTCGTCCTCGAAGGCTTCTTTCTCGGAGGCATTGTCATGGGGC
TGCGCAAACAATATTTCAGTAACGAATTCCAGAAGAAGAACCAGGACCTG
ATGGATGAGCATAAGAAGGCTTTCCCCACCGTGCCCTTCTCCAGTGGCTA
TCCCGACATGGGTTCTGGTCGCTACACAGATCGCTTGAGTTATGAGCAGT
GGTTCCTCTTTAACAACGCGCAGCGTGGACATCAAAACTTTTTGGAATCC
GTATGGGCCACGATGGCGCTGCTGTTGGTCGGCGGGTTCTTCGAGCCTAA
GATCTTCGCCAGTTTGGGGGCCGCGTATATTGTGGCGCGTGCACTCTATG
CCCATGGCTATGCCTCGCACGGCCCTAAAGGACGGGAGGTAGGAGCAGTG
GTGGGATTGCTTTCGTTATTGGGAATGGTGGGCATGTGTATCAAGATTGC
TGTTGCCCTGATCAATGGAGGGAACTAA back to top
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