Properties
| Property Name | Value |
|---|
| TranscriptId | 579191 |
| Track | FilteredModels2 |
| ProteinId | 579105 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:832662..834132 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2110 ID=mRNA_2110|Name=jgi.p|Nanoce1779_2|579105|organism=Nannochloropsis oceanica|type=mRNA|length=720bp
AACAGGCACAAGCAACCCCGAGTTCAGTCCATACTAAGCATCATGGCATC
CGGAGGCATGGCAGAGCTGCGGGCGGCTGAGCAGAAGGCGGCCCAGATCG
TCCAAGAAGCCCGCGCGGCTCGTGGCGAGCGGCTCAAGGAGGCAACGGTG
GAGGCGCGCAGAGTGATCGAAGGCTATCGGGCGGAGAAGGAGGAGCAGTT
CCAAGAGTTTGTCAAGACGAAATACGGCACCAGCGGCTCCCAAACTGCGG
ACCTGGACAGACAGACAGAGACTGAACTCGCCAAGCTCAGCGCGGACTTC
AAGCAAAACAAGGAAGCGGTGTTGAGCGTGCTGGTGGACAAGGTCACAAA
TGTGAATGTTGATGTGCCAGAGGCTTGGGGCGTCTGTACCAAGTACTAAG
CTTTATCATTCGTTCAGCAGGAGAAAGAAAGAGGATGAATGCAGTGCGCT
TGGACGCATTCTTTTCAAATAATCATTTCCTACGTGTTTTCTTCGCGGTT
GTTGCGTTTACATTGAGAGGATCGACCGCAAATAATTCAATGTGTGTATG
TGATGGGGCGTAGCTTTCCCGGGAAGGGAGGCATGTTATAAACAGTATGT
TTTTGAAAAAGTCTGTCGATCTGGTCGGGGGGGGGGGGCTGTATGAGATA
GCAGCACCGGAAGCGTCAGCGACAACAAAACCAAAAAGAAAGAAAAAAGA
AGAGGGAGTGAATGACGAAG back to topprotein sequence of jgi.p|Nanoce1779_2|579105 >mRNA_2110-protein ID=mRNA_2110-protein|Name=jgi.p|Nanoce1779_2|579105|organism=Nannochloropsis oceanica|type=polypeptide|length=119bp
MASGGMAELRAAEQKAAQIVQEARAARGERLKEATVEARRVIEGYRAEKE
EQFQEFVKTKYGTSGSQTADLDRQTETELAKLSADFKQNKEAVLSVLVDK
VTNVNVDVPEAWGVCTKY* back to topmRNA from alignment at scaffold_4:832662..834132- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2110 ID=mRNA_2110|Name=jgi.p|Nanoce1779_2|579105|organism=Nannochloropsis oceanica|type=mRNA|length=1471bp|location=Sequence derived from alignment at scaffold_4:832662..834132- (Nannochloropsis oceanica)
AACAGGCACAAGCAACCCCGAGTTCAGTCCATACTAAGCATCATGGCATC
CGGAGGCATGGCAGAGCTGCGGGCGGCTGAGCAGAAGGCGGCCCAGATCG
TCCAAGAAGCCCGCGCGGGTAAGGCAAAGTGCTTGGTGGAGGGAACTCGA
GCTGTGTCCAGTGTTTATGTCGACTCCCTTCCGTTTTGTTTTGTAGGCAT
CCAATTCGTGATTAGGCACGGATATACACAATCGTGATCTGCTTCTGTCG
CGCATAAACCTGCGGGTATCGTGGTATTGATGTGGTGTCTGCTGTAATGA
TGTCTCCCGCGCTTTTGGCATGTTTGTAAATAGAGAGATTCGTCTGGGCG
TCACCTCGATGCGGTCAAACGTGATTCCAGGAAGCAAGGGAGTGGAGGTG
TTTAGTAGCATTTTTGGTGGAAGAGAGCCTGAGTTGAAATGCGCTTTCTC
GATCTATTTGTTTTCACGTTTTACCGCCCTCCCTTCCTCATTTATCCCCG
CATTCCATATTTCGTTCGCACCAACACAGCTCGTGGCGAGCGGCTCAAGG
AGGCAACGGTGGAGGCGCGCAGAGTGATCGAAGGCTATCGGGCGGAGAAG
GAGGAGCAGTTCCAAGAGTTTGTCAAGACGGTGAGAGATGGGGGCGAAAT
ATCTTGTGCCTCAATGGCCCAACCCTCATTATCGGGCTTTCACTTGAAAT
GCCATGCCCTCCTCCATTGCCTTTTGTTGCTCAACCCCCGTTTGAAAGTC
GTTGAGTTACAGAACACTCACGCTTCTTCACTTCTTTCTCACATTCCTCG
TAATCTCTCGTAGAAATACGGCACCAGCGGCTCCCAAACTGCGGACCTGG
ACAGACAGACAGAGACTGAACTCGCCAAGCTCAGGTACCGTCTCTTTTTC
TCGCATGTATACGATTCCCTTTTCTTTGAATAATAGCACAAACCATGTTT
TGTCCTGAAATGTCGAAAGACCATCTTCATTCCCTTGCGGTCGTTCATAA
GTGATCCCTTCCACCTTCCCACCCCGTCAATGAAAACACAGCGCGGACTT
CAAGCAAAACAAGGAAGCGGTGTTGAGCGTGCTGGTGGACAAGGTCACAA
ATGTGAATGTTGATGTGCCAGAGGCTTGGGGCGTCTGTACCAAGTACTAA
GCTTTATCATTCGTTCAGCAGGAGAAAGAAAGAGGATGAATGCAGTGCGC
TTGGACGCATTCTTTTCAAATAATCATTTCCTACGTGTTTTCTTCGCGGT
TGTTGCGTTTACATTGAGAGGATCGACCGCAAATAATTCAATGTGTGTAT
GTGATGGGGCGTAGCTTTCCCGGGAAGGGAGGCATGTTATAAACAGTATG
TTTTTGAAAAAGTCTGTCGATCTGGTCGGGGGGGGGGGGCTGTATGAGAT
AGCAGCACCGGAAGCGTCAGCGACAACAAAACCAAAAAGAAAGAAAAAAG
AAGAGGGAGTGAATGACGAAG back to topCoding sequence (CDS) from alignment at scaffold_4:832662..834132- >mRNA_2110 ID=mRNA_2110|Name=jgi.p|Nanoce1779_2|579105|organism=Nannochloropsis oceanica|type=CDS|length=1428bp|location=Sequence derived from alignment at scaffold_4:832662..834132- (Nannochloropsis oceanica)
CGCGGACTTCAAGCAAAACAAGGAAGCGGTGTTGAGCGTGCTGGTGGACA
AGGTCACAAATGTGAATGTTGATGTGCCAGAGGCTTGGGGCGTCTGTACC
AAGTACTAAAAATACGGCACCAGCGGCTCCCAAACTGCGGACCTGGACAG
ACAGACAGAGACTGAACTCGCCAAGCTCAGCTCGTGGCGAGCGGCTCAAG
GAGGCAACGGTGGAGGCGCGCAGAGTGATCGAAGGCTATCGGGCGGAGAA
GGAGGAGCAGTTCCAAGAGTTTGTCAAGACGATGGCATCCGGAGGCATGG
CAGAGCTGCGGGCGGCTGAGCAGAAGGCGGCCCAGATCGTCCAAGAAGCC
CGCGCGGCGCGGACTTCAAGCAAAACAAGGAAGCGGTGTTGAGCGTGCTG
GTGGACAAGGTCACAAATGTGAATGTTGATGTGCCAGAGGCTTGGGGCGT
CTGTACCAAGTACTAAAAATACGGCACCAGCGGCTCCCAAACTGCGGACC
TGGACAGACAGACAGAGACTGAACTCGCCAAGCTCAGCTCGTGGCGAGCG
GCTCAAGGAGGCAACGGTGGAGGCGCGCAGAGTGATCGAAGGCTATCGGG
CGGAGAAGGAGGAGCAGTTCCAAGAGTTTGTCAAGACGATGGCATCCGGA
GGCATGGCAGAGCTGCGGGCGGCTGAGCAGAAGGCGGCCCAGATCGTCCA
AGAAGCCCGCGCGGCGCGGACTTCAAGCAAAACAAGGAAGCGGTGTTGAG
CGTGCTGGTGGACAAGGTCACAAATGTGAATGTTGATGTGCCAGAGGCTT
GGGGCGTCTGTACCAAGTACTAAAAATACGGCACCAGCGGCTCCCAAACT
GCGGACCTGGACAGACAGACAGAGACTGAACTCGCCAAGCTCAGCTCGTG
GCGAGCGGCTCAAGGAGGCAACGGTGGAGGCGCGCAGAGTGATCGAAGGC
TATCGGGCGGAGAAGGAGGAGCAGTTCCAAGAGTTTGTCAAGACGATGGC
ATCCGGAGGCATGGCAGAGCTGCGGGCGGCTGAGCAGAAGGCGGCCCAGA
TCGTCCAAGAAGCCCGCGCGGCGCGGACTTCAAGCAAAACAAGGAAGCGG
TGTTGAGCGTGCTGGTGGACAAGGTCACAAATGTGAATGTTGATGTGCCA
GAGGCTTGGGGCGTCTGTACCAAGTACTAAAAATACGGCACCAGCGGCTC
CCAAACTGCGGACCTGGACAGACAGACAGAGACTGAACTCGCCAAGCTCA
GCTCGTGGCGAGCGGCTCAAGGAGGCAACGGTGGAGGCGCGCAGAGTGAT
CGAAGGCTATCGGGCGGAGAAGGAGGAGCAGTTCCAAGAGTTTGTCAAGA
CGATGGCATCCGGAGGCATGGCAGAGCTGCGGGCGGCTGAGCAGAAGGCG
GCCCAGATCGTCCAAGAAGCCCGCGCGG back to top
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