jgi.p|Nanoce1779_2|668757, mRNA_2028 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|668757
Unique Name	mRNA_2028
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5992
Alignment location	scaffold_4:596661..602652 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	668843
Track	FilteredModels2
ProteinId	668757

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_4	supercontig	scaffold_4:596661..602652 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|668757	gene_2028	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|668757	mRNA_2028-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_2028	CDS_2028	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_4:596661..602652+
coding sequence from alignment at scaffold_4:596661..602652+

mRNA sequence

>mRNA_2028 ID=mRNA_2028|Name=jgi.p|Nanoce1779_2|668757|organism=Nannochloropsis oceanica|type=mRNA|length=5992bp
ATGGATTTTGAGACGAAGCGTTGCTCGAACGCAATTAAGAAGCTGTGCAG
CGCGGGGAATGTGACAGAGGTGTTCGCGGTGCTGGAGGATATGCTGGGGC
ATGGGCTGGTGCCGGACCTGAAGACGGTGAAGACCATCATGCGGACATGC
GTGAAGAAGCTGGCCTGGCGACGGGCGGTGCAGCTGCTGCACACAACAGG
CCTGCCGCTGGACGTGGTCATCTTCACAATGGCTATCAACACTTGCGGTA
AGGCCGGAGAGTGGGAGCAGGGCCTGCGGGTGCTGCGGGAGATGGACTCT
GAGGAGGCCAAGGCCCACGGCATCGTGCCCAACGAGGTGAGCTACGGGAC
GGCCATCTCGGCTTGCGGCAAGGCGGGCCGGTGGGAGCTGGCGCTCTCGC
TCTTAAACGAGGTCAAGGATCGTGGCCTGCTCCTCAATGATGTTTGTTAC
GGCGGGGCGATTGATGCCTGCGGGCGCGCGGGTCAGTGGCAGGAGGCACT
CAAGCTCCTGAATGAGATGACGCTGGACGGGGTGGCGGCCAATGAGGTGT
GCTACAACTCAGCCATCTCCGCCTGCGGCAAGGCCGGGGAGTGGGAGAAG
GCGGTGGCTTTGTTGCGCGAGATGCGGGAGCGGGGCCTGACGCCCGACGA
GCTGAACTATAACTCTGCTATCTCGGCCTGCGGCAAGGCGGCCCAGTGGG
CGCACGCCATTCGCCTGCTCCGCGAGATGGCCGTACGAGGGTTGTGCCCG
GATGTGGTGTCCTACGGGGCGGCCATCGATGCCTGCCGTAAGGCCGGCAA
GTACGACCGAGGCCTGGCGCTGCTGGGCGAGATGCGCCAGGTGGGCCTGG
TGCCCAACGAGGTTTGCTACCACTCGGCGGTCACGGCCTGCTCCGAGGCA
GGCCGGTGGAATGAGGCCCTGTTTGTGCTCTCGGAGATGGTCAAGCAAGG
CCTCAAGCCGGATGCCATCAGCTACAATGCGGCTGTGGAGGCCTGCGCCA
AGTCGGGAAAGTGGGACGCCCTGGTCATCCTGCTGCAGGAGACGGCTCGG
GACCCGGACACCACACTTTTGGATGCCGTCTACAACAATGCCGTCATAAC
CTGCGCCAAGTACGGCAACTGGGAGTTGGCGGCCACCGTGCTGCAGGAGA
TGGAGTATTTGGGTGGGAATGGTGGAAGTGGGGCGGGGACGCCGGGCGGC
AGCAATAGCAGCAGTCATCCGGGCTTGTCGCCCACCTCGGCCTCCTACTC
TGCTGTCATTGACGCCTGCGCCAAGGCCCTGGCCGCCGCAGGAGCAGCAG
GTGACGGGAGCCCATCCTCTTTCAACCCTCCCCCTCCCGGTGGCCTGCCC
CAGTGGGAGCTGATCCTGAGCAAGCTTGACCGCATGCGTGAGAAAGGCCT
GCTGCCCGACTCCAGCTCGTACAACGCGGCCGTACGCGCCTGTGTCTGCG
GGCCAGCCAAGCACTGGAAGAAGGCCGTGGATTTGCTGCAGGAGATGGCC
TCAAAGGGCTACCTAGTCGACCAGAGCACCTCGAACGCCGTCATGCAGGC
CTGCACTGCTGGCGTTGCCGGCGCTGCGGGTAGTGATGCTGCGGATGAGG
CAGTTGTATCATCAACAGCCGCGGGAGGGATGGGCAGACCCGACGAGACC
CATGCTGCAGCAGAACGTGAGAGGGCCTTGGCACTCCTCCGCAAGATGAT
GGCAGGCGGCTCACCTTTTGACAGCACCAGTAGCGAGTCCTCAGGTGTGC
CTTCTGGCCCTCCTGCTGCTCTTCTTTCCGCTGTGTCTTCCTCCCGCACT
TCTACAGGACTGGGCTCCGGTGCTCCCTCCTTAGCGTCTTCCACCTCTTG
CCTATTGCTTAACTCACACGGAGGAGACTCGTTTGTCGAGAGTGGGCAAG
CCCCACTTTGGGAACGGACAACCAGTATCCCCGACGAAATTGCACTCACG
AGTGGAAGCAGCGTGATTGGAGAAGTCGGTGGTCTCGGGCTGGGTGGTGA
CCTCGCAGAGATCCTTGGCCCTTCCTCCCCGACGGGCCCGGAATCCCCGC
GACCGGTGGGGTTGATCGGCAGTCCATCTTTCAGTTCTATTCCAGCTTCA
TCGACGGTTGCATATCCTCGGTCGCCTGCTATGGCGTTAGGACCTGGGAG
TCCATTTTTGAGCGCGACTAAAGGTAGCAGCACCGAGAATGATGGGAATG
GAGGAGGAAGGATGGGAAGCTTCTTGTTGCAAGCGGCGCGGCACAAGCCG
ACAGAGCAGAAGGTCGAAGTTGTGACGGGGGATAGTGATGGGGAGGGAAG
AGCCCCTGGTGATGGTGCGATGGAAAGTGAGAAAGCGGTGGGCGTTTTAA
ATTCAGGATGGAGCCAGTCGTAAGAGAGAGACACACACAGAGAGACACAG
AGAGAAAGACACAGAAAAAGGGCAGAGAAGACGGGCGGAAACTCCATGAG
AAATTAGATAGATATAATAGCACGCGCGTATAATTCCAAGCTCAGAAACC
GATTTTGGGCAATGAAGAATGAAAAGGAATTTGGTGAACAGAAGAGGCAG
GGGGAAGACCGGCGCCCCTCGTGTGAATGGACGATTTGGGGGAAATTTGA
GGATACCTTAGTGTACGGAGGGGACAGAATTGCAAGCTGCGAGAGCGAAG
ACAGCAATAATATATAAAACCAGAGGGGGGCGCCCTACATTACACCACCA
CTATTACAATCATTCTACCAATTCATTGAATAGGGAAGATGAAGGAGGAG
GTAGAGGAGCAAGCGCGAGAGAGGCTGTCAAAGGCTCCCTGTGCCGTGGA
CCACCACGCGTCGGAGTCGCTACTACAGTATTTCACCGCTAGACATAAAC
CACAAAAGAGGTACGAAGGGATGAAAGCGGGAAAATCAAAAAAGCTACGG
AGAACAGCGGGAGCATAAACTACTGGACAACGACAGGAGTTCCAACACGA
CACAAGACAACGAGACCTGCATTCCATGCATTTACAGAGCGAGAGCGCGT
GTTGAACGACAATACAAATGAAGACTATGATTTGTTTACCTACTTATGTT
ATTTTCATAATTGCAATGGCCAGTGGAAAGTCAAAAGGAGTGATTCTCAT
GGTATTGAGTGTAAGCAAAGCTACAGCAGAAAAGGCGGTAAAACAAGAGA
CAGGTAGAGAAGACGAAGCGGCGGCAGGGATGGCGAGACGATGCTTAAGA
CATATTACAAGCTGAAAATGTAGCGTGTCTTTTTGAATGTCTCATTAATC
CCAGTGTTGGCTCAAGTAGCAGTGCTTGTGTCTATAATCTGTCTGTCCGT
AACGGAAACGATAGAATACCTACCAATTAGAGAAGAAATTTCCTGTCCCC
ACCCATTTGTAAATGGATGAAAGCAGAGATGGCATTTTTTTCAGCTACCA
GCCAGCATAGATTCTATCAAAAAAGAGAATGATTCACTACGTACGGGGCA
AAGCAAATTTTAGGGGCGGGAACTGCGAAAACATGGCCCAGCAGACCGGT
CAACAGAGCACCCACATTTTACAAACAAAATGCTAAAGTGAAAAAGAGAC
CAAAAGTCCCTCTCATGCCCCACGCAATACCAGAGGCAATAGACAGGTGA
CTAAACAACGATGTGGAAAGCGCCATCGAACCAAAAAAAAAGAGAGAGTA
GGCAGAGAGGGCCCCCATTCACGATGCAAGAGAAGAAATGGGCTATAGTC
CAGCACCAGCACCACCTCCAACCAGCGGCCGCTGCCCAAGGGAAGCGAGA
ATCAAATCGATGCGACAAACGTGATTTCTGGACAACGAAAGAAGAATAAG
TCATGAGCGGGGTTGCAGTGGCCCTTCGTTTGCTGTTTGCGCAAGCGGTA
GCCCTTCGTGGAAATGTAATTCTTCCATCAACAGCAATTGGCACTTTTCA
GTTATTTCCTTTCTCTGTACTCCTTTGATCTACACGTCTTTAGTAGAAAG
ACTAGTAAGGGCTCTTCGCGAAGTGGCAATAGTTTTGCAAGGGATGAGGG
TAACGAGTGCGGCTGATAATTTGGAGACGTATTGCTTGCCGTGTGGCCTG
CGCTCTGCAGCTACACGCGTCCTTCTTTATCATTTTACAACGCATTAAAG
TATATATGGTACACTGGAACTATCAACGGGTTTGTTCCCCCGCCTTCATT
CCGTGCCTTCATTTCGTGGGGCTGGGGCCCATCGTTGTGGTATGGGACCA
TCCATGGTTACTTTTGTCCGCAATGAAGCTAACTCATATTTACAACTACC
TAGCTTCACAGATGACATGAATCAAGAGCCACCACCACCCCGCCAGATTC
ATTGCGTTCTGGGCCCCGCCGATTTTGTGCAATTGCGCTCGTCGCTCATC
CTCGACATCGATCAAAACGGCGTGGTCTGGGTGTCCTTGCCGTCACCAGC
AGCAGCAGCAGCAGCAGCAAAAACAGCAGCAGCAGTGGCAGCAACAACAT
CTACAAAGCCAACTACTACTACTTCTTCCACATCTACTACCATATCAACG
ACAATACCCATATTGACCTCCCCATTCTCGACACATGCTGCTCCATCTCC
GACAGAGGCACACACATTAGGGTTGTACGACAGAGAATTGCTGTGTGAAT
TGATGGATCTGCGCTCCTCCTTTGACGTAGTACCTCGCTCTCGCTACTCG
GCTGCCCGCTGGGAAAGCAACCAGTACGAATGCCTCAGCAAGCCAGGTTG
TAACCCATTTTTGAATCGCTCTGCCCTAAAGCTTGCCAATATAAATATGA
TTATGCCTTTGACACCGGTCTCACTCCCTTCGACCGCTTTGTCACCTGTA
TCAATGACCTTTGTAGACTTATGTGGTGGACCTGGTGGCTTTTCCGAGTA
CTTATTACGACGCCAGGGTCCTGCAGCAGAGGTGCATGGCTGGGGCATGA
CCTTAGAAAACTGCGACTGTCCATGGGATCGACATAAATTGGCAGATTGG
ATCGTGGAAGAGGATGAGGAGGGCGAAAGCGAGAAGGACGAGGAGAAGGA
CGAGAATGGCGACAACCATGCACCTGCTAGCAAACGGCGGAAGACAGCGC
CGGCAATGGCACGGACTTTGCGCTTCTGCTATGGCCAAGACAGGCGAGGC
GATCTCTGTCGGCCCGAGAACATCCAGTATCTTCGTGCTTTCCTGCCGGG
GAGGGTCGACGTGGTTGTAGCCGACGGGGGATTCGCGGAAGCCCGGGCTC
GCTTTGATCAAGAAGCGATGATGTTGCCTTTATTGGTTAGTGAGGTCTCT
GCCATGTTCTATATTCTGAGAAAAGGCGGGTTATTTGTGTGTAAATTCTT
TGATGTGACCTTGCCAGCGACTGTGCAGTTGATTGGACTGTTGGGATTAT
TGTTTGAGAGCGTGGCGATCGTGAAGCCGGTGACAAGCCGACCAGCGAGT
TCGGAGAGGTACGTTTTGGGGCGAGGATTCAGAGGAGAAGGAGGAGAAAA
CGAGCAAAACAAAGAGGTTGCGCTGCTGCTTGAGAAGATGTTTGCACGGG
TGCAGGCAGGGCAGACGGATGGGTTGTCGGAGGAGGAGGAGGAGGAAGGG
AATGAGGGAGGGGTGGCGACGTCCTTGGGGAACTTATTGGCCCCTGGGTC
GGCTTTCGCTGCTTGGCTGCGGATTGTAAATAATAGCTTAATGCGTGCAC
AGATTAAGGCTTGTTATGCTATTCACGAGAAATTAAACACGAAGGATGAG
GAAGAGGAGGAGGAAGTGCAACGAGAAGGAGATGTAGTTGTGGGGTGTCA
AGAAAAGGAGGAGCAGAAGCAGGAGCAGGAGCAGAAGGAGCAGGAAACGG
AAAAAGAGACAAAGAAGAGAGAGAAGGAAAAGGAGACAATGGACATGGAG
GCATATCGACGGTTGTGGGACTTGGACAGAATTCTCTAATGATATAGAAA
TAACGAAATCAAGATTGATAAATAAGACCAACAGGGGAGAATTTTAGAAA
ATGCGAGTAGGGTGCAAGTAACTGATGATGTAAACTAGCATG

protein sequence of jgi.p|Nanoce1779_2|668757

>mRNA_2028-protein ID=mRNA_2028-protein|Name=jgi.p|Nanoce1779_2|668757|organism=Nannochloropsis oceanica|type=polypeptide|length=791bp
MDFETKRCSNAIKKLCSAGNVTEVFAVLEDMLGHGLVPDLKTVKTIMRTC
VKKLAWRRAVQLLHTTGLPLDVVIFTMAINTCGKAGEWEQGLRVLREMDS
EEAKAHGIVPNEVSYGTAISACGKAGRWELALSLLNEVKDRGLLLNDVCY
GGAIDACGRAGQWQEALKLLNEMTLDGVAANEVCYNSAISACGKAGEWEK
AVALLREMRERGLTPDELNYNSAISACGKAAQWAHAIRLLREMAVRGLCP
DVVSYGAAIDACRKAGKYDRGLALLGEMRQVGLVPNEVCYHSAVTACSEA
GRWNEALFVLSEMVKQGLKPDAISYNAAVEACAKSGKWDALVILLQETAR
DPDTTLLDAVYNNAVITCAKYGNWELAATVLQEMEYLGGNGGSGAGTPGG
SNSSSHPGLSPTSASYSAVIDACAKALAAAGAAGDGSPSSFNPPPPGGLP
QWELILSKLDRMREKGLLPDSSSYNAAVRACVCGPAKHWKKAVDLLQEMA
SKGYLVDQSTSNAVMQACTAGVAGAAGSDAADEAVVSSTAAGGMGRPDET
HAAAERERALALLRKMMAGGSPFDSTSSESSGVPSGPPAALLSAVSSSRT
STGLGSGAPSLASSTSCLLLNSHGGDSFVESGQAPLWERTTSIPDEIALT
SGSSVIGEVGGLGLGGDLAEILGPSSPTGPESPRPVGLIGSPSFSSIPAS
STVAYPRSPAMALGPGSPFLSATKGSSTENDGNGGGRMGSFLLQAARHKP
TEQKVEVVTGDSDGEGRAPGDGAMESEKAVGVLNSGWSQS*

mRNA from alignment at scaffold_4:596661..602652+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2028 ID=mRNA_2028|Name=jgi.p|Nanoce1779_2|668757|organism=Nannochloropsis oceanica|type=mRNA|length=5992bp|location=Sequence derived from alignment at scaffold_4:596661..602652+ (Nannochloropsis oceanica)
ATGGATTTTGAGACGAAGCGTTGCTCGAACGCAATTAAGAAGCTGTGCAG
CGCGGGGAATGTGACAGAGGTGTTCGCGGTGCTGGAGGATATGCTGGGGC
ATGGGCTGGTGCCGGACCTGAAGACGGTGAAGACCATCATGCGGACATGC
GTGAAGAAGCTGGCCTGGCGACGGGCGGTGCAGCTGCTGCACACAACAGG
CCTGCCGCTGGACGTGGTCATCTTCACAATGGCTATCAACACTTGCGGTA
AGGCCGGAGAGTGGGAGCAGGGCCTGCGGGTGCTGCGGGAGATGGACTCT
GAGGAGGCCAAGGCCCACGGCATCGTGCCCAACGAGGTGAGCTACGGGAC
GGCCATCTCGGCTTGCGGCAAGGCGGGCCGGTGGGAGCTGGCGCTCTCGC
TCTTAAACGAGGTCAAGGATCGTGGCCTGCTCCTCAATGATGTTTGTTAC
GGCGGGGCGATTGATGCCTGCGGGCGCGCGGGTCAGTGGCAGGAGGCACT
CAAGCTCCTGAATGAGATGACGCTGGACGGGGTGGCGGCCAATGAGGTGT
GCTACAACTCAGCCATCTCCGCCTGCGGCAAGGCCGGGGAGTGGGAGAAG
GCGGTGGCTTTGTTGCGCGAGATGCGGGAGCGGGGCCTGACGCCCGACGA
GCTGAACTATAACTCTGCTATCTCGGCCTGCGGCAAGGCGGCCCAGTGGG
CGCACGCCATTCGCCTGCTCCGCGAGATGGCCGTACGAGGGTTGTGCCCG
GATGTGGTGTCCTACGGGGCGGCCATCGATGCCTGCCGTAAGGCCGGCAA
GTACGACCGAGGCCTGGCGCTGCTGGGCGAGATGCGCCAGGTGGGCCTGG
TGCCCAACGAGGTTTGCTACCACTCGGCGGTCACGGCCTGCTCCGAGGCA
GGCCGGTGGAATGAGGCCCTGTTTGTGCTCTCGGAGATGGTCAAGCAAGG
CCTCAAGCCGGATGCCATCAGCTACAATGCGGCTGTGGAGGCCTGCGCCA
AGTCGGGAAAGTGGGACGCCCTGGTCATCCTGCTGCAGGAGACGGCTCGG
GACCCGGACACCACACTTTTGGATGCCGTCTACAACAATGCCGTCATAAC
CTGCGCCAAGTACGGCAACTGGGAGTTGGCGGCCACCGTGCTGCAGGAGA
TGGAGTATTTGGGTGGGAATGGTGGAAGTGGGGCGGGGACGCCGGGCGGC
AGCAATAGCAGCAGTCATCCGGGCTTGTCGCCCACCTCGGCCTCCTACTC
TGCTGTCATTGACGCCTGCGCCAAGGCCCTGGCCGCCGCAGGAGCAGCAG
GTGACGGGAGCCCATCCTCTTTCAACCCTCCCCCTCCCGGTGGCCTGCCC
CAGTGGGAGCTGATCCTGAGCAAGCTTGACCGCATGCGTGAGAAAGGCCT
GCTGCCCGACTCCAGCTCGTACAACGCGGCCGTACGCGCCTGTGTCTGCG
GGCCAGCCAAGCACTGGAAGAAGGCCGTGGATTTGCTGCAGGAGATGGCC
TCAAAGGGCTACCTAGTCGACCAGAGCACCTCGAACGCCGTCATGCAGGC
CTGCACTGCTGGCGTTGCCGGCGCTGCGGGTAGTGATGCTGCGGATGAGG
CAGTTGTATCATCAACAGCCGCGGGAGGGATGGGCAGACCCGACGAGACC
CATGCTGCAGCAGAACGTGAGAGGGCCTTGGCACTCCTCCGCAAGATGAT
GGCAGGCGGCTCACCTTTTGACAGCACCAGTAGCGAGTCCTCAGGTGTGC
CTTCTGGCCCTCCTGCTGCTCTTCTTTCCGCTGTGTCTTCCTCCCGCACT
TCTACAGGACTGGGCTCCGGTGCTCCCTCCTTAGCGTCTTCCACCTCTTG
CCTATTGCTTAACTCACACGGAGGAGACTCGTTTGTCGAGAGTGGGCAAG
CCCCACTTTGGGAACGGACAACCAGTATCCCCGACGAAATTGCACTCACG
AGTGGAAGCAGCGTGATTGGAGAAGTCGGTGGTCTCGGGCTGGGTGGTGA
CCTCGCAGAGATCCTTGGCCCTTCCTCCCCGACGGGCCCGGAATCCCCGC
GACCGGTGGGGTTGATCGGCAGTCCATCTTTCAGTTCTATTCCAGCTTCA
TCGACGGTTGCATATCCTCGGTCGCCTGCTATGGCGTTAGGACCTGGGAG
TCCATTTTTGAGCGCGACTAAAGGTAGCAGCACCGAGAATGATGGGAATG
GAGGAGGAAGGATGGGAAGCTTCTTGTTGCAAGCGGCGCGGCACAAGCCG
ACAGAGCAGAAGGTCGAAGTTGTGACGGGGGATAGTGATGGGGAGGGAAG
AGCCCCTGGTGATGGTGCGATGGAAAGTGAGAAAGCGGTGGGCGTTTTAA
ATTCAGGATGGAGCCAGTCGTAAGAGAGAGACACACACAGAGAGACACAG
AGAGAAAGACACAGAAAAAGGGCAGAGAAGACGGGCGGAAACTCCATGAG
AAATTAGATAGATATAATAGCACGCGCGTATAATTCCAAGCTCAGAAACC
GATTTTGGGCAATGAAGAATGAAAAGGAATTTGGTGAACAGAAGAGGCAG
GGGGAAGACCGGCGCCCCTCGTGTGAATGGACGATTTGGGGGAAATTTGA
GGATACCTTAGTGTACGGAGGGGACAGAATTGCAAGCTGCGAGAGCGAAG
ACAGCAATAATATATAAAACCAGAGGGGGGCGCCCTACATTACACCACCA
CTATTACAATCATTCTACCAATTCATTGAATAGGGAAGATGAAGGAGGAG
GTAGAGGAGCAAGCGCGAGAGAGGCTGTCAAAGGCTCCCTGTGCCGTGGA
CCACCACGCGTCGGAGTCGCTACTACAGTATTTCACCGCTAGACATAAAC
CACAAAAGAGGTACGAAGGGATGAAAGCGGGAAAATCAAAAAAGCTACGG
AGAACAGCGGGAGCATAAACTACTGGACAACGACAGGAGTTCCAACACGA
CACAAGACAACGAGACCTGCATTCCATGCATTTACAGAGCGAGAGCGCGT
GTTGAACGACAATACAAATGAAGACTATGATTTGTTTACCTACTTATGTT
ATTTTCATAATTGCAATGGCCAGTGGAAAGTCAAAAGGAGTGATTCTCAT
GGTATTGAGTGTAAGCAAAGCTACAGCAGAAAAGGCGGTAAAACAAGAGA
CAGGTAGAGAAGACGAAGCGGCGGCAGGGATGGCGAGACGATGCTTAAGA
CATATTACAAGCTGAAAATGTAGCGTGTCTTTTTGAATGTCTCATTAATC
CCAGTGTTGGCTCAAGTAGCAGTGCTTGTGTCTATAATCTGTCTGTCCGT
AACGGAAACGATAGAATACCTACCAATTAGAGAAGAAATTTCCTGTCCCC
ACCCATTTGTAAATGGATGAAAGCAGAGATGGCATTTTTTTCAGCTACCA
GCCAGCATAGATTCTATCAAAAAAGAGAATGATTCACTACGTACGGGGCA
AAGCAAATTTTAGGGGCGGGAACTGCGAAAACATGGCCCAGCAGACCGGT
CAACAGAGCACCCACATTTTACAAACAAAATGCTAAAGTGAAAAAGAGAC
CAAAAGTCCCTCTCATGCCCCACGCAATACCAGAGGCAATAGACAGGTGA
CTAAACAACGATGTGGAAAGCGCCATCGAACCAAAAAAAAAGAGAGAGTA
GGCAGAGAGGGCCCCCATTCACGATGCAAGAGAAGAAATGGGCTATAGTC
CAGCACCAGCACCACCTCCAACCAGCGGCCGCTGCCCAAGGGAAGCGAGA
ATCAAATCGATGCGACAAACGTGATTTCTGGACAACGAAAGAAGAATAAG
TCATGAGCGGGGTTGCAGTGGCCCTTCGTTTGCTGTTTGCGCAAGCGGTA
GCCCTTCGTGGAAATGTAATTCTTCCATCAACAGCAATTGGCACTTTTCA
GTTATTTCCTTTCTCTGTACTCCTTTGATCTACACGTCTTTAGTAGAAAG
ACTAGTAAGGGCTCTTCGCGAAGTGGCAATAGTTTTGCAAGGGATGAGGG
TAACGAGTGCGGCTGATAATTTGGAGACGTATTGCTTGCCGTGTGGCCTG
CGCTCTGCAGCTACACGCGTCCTTCTTTATCATTTTACAACGCATTAAAG
TATATATGGTACACTGGAACTATCAACGGGTTTGTTCCCCCGCCTTCATT
CCGTGCCTTCATTTCGTGGGGCTGGGGCCCATCGTTGTGGTATGGGACCA
TCCATGGTTACTTTTGTCCGCAATGAAGCTAACTCATATTTACAACTACC
TAGCTTCACAGATGACATGAATCAAGAGCCACCACCACCCCGCCAGATTC
ATTGCGTTCTGGGCCCCGCCGATTTTGTGCAATTGCGCTCGTCGCTCATC
CTCGACATCGATCAAAACGGCGTGGTCTGGGTGTCCTTGCCGTCACCAGC
AGCAGCAGCAGCAGCAGCAAAAACAGCAGCAGCAGTGGCAGCAACAACAT
CTACAAAGCCAACTACTACTACTTCTTCCACATCTACTACCATATCAACG
ACAATACCCATATTGACCTCCCCATTCTCGACACATGCTGCTCCATCTCC
GACAGAGGCACACACATTAGGGTTGTACGACAGAGAATTGCTGTGTGAAT
TGATGGATCTGCGCTCCTCCTTTGACGTAGTACCTCGCTCTCGCTACTCG
GCTGCCCGCTGGGAAAGCAACCAGTACGAATGCCTCAGCAAGCCAGGTTG
TAACCCATTTTTGAATCGCTCTGCCCTAAAGCTTGCCAATATAAATATGA
TTATGCCTTTGACACCGGTCTCACTCCCTTCGACCGCTTTGTCACCTGTA
TCAATGACCTTTGTAGACTTATGTGGTGGACCTGGTGGCTTTTCCGAGTA
CTTATTACGACGCCAGGGTCCTGCAGCAGAGGTGCATGGCTGGGGCATGA
CCTTAGAAAACTGCGACTGTCCATGGGATCGACATAAATTGGCAGATTGG
ATCGTGGAAGAGGATGAGGAGGGCGAAAGCGAGAAGGACGAGGAGAAGGA
CGAGAATGGCGACAACCATGCACCTGCTAGCAAACGGCGGAAGACAGCGC
CGGCAATGGCACGGACTTTGCGCTTCTGCTATGGCCAAGACAGGCGAGGC
GATCTCTGTCGGCCCGAGAACATCCAGTATCTTCGTGCTTTCCTGCCGGG
GAGGGTCGACGTGGTTGTAGCCGACGGGGGATTCGCGGAAGCCCGGGCTC
GCTTTGATCAAGAAGCGATGATGTTGCCTTTATTGGTTAGTGAGGTCTCT
GCCATGTTCTATATTCTGAGAAAAGGCGGGTTATTTGTGTGTAAATTCTT
TGATGTGACCTTGCCAGCGACTGTGCAGTTGATTGGACTGTTGGGATTAT
TGTTTGAGAGCGTGGCGATCGTGAAGCCGGTGACAAGCCGACCAGCGAGT
TCGGAGAGGTACGTTTTGGGGCGAGGATTCAGAGGAGAAGGAGGAGAAAA
CGAGCAAAACAAAGAGGTTGCGCTGCTGCTTGAGAAGATGTTTGCACGGG
TGCAGGCAGGGCAGACGGATGGGTTGTCGGAGGAGGAGGAGGAGGAAGGG
AATGAGGGAGGGGTGGCGACGTCCTTGGGGAACTTATTGGCCCCTGGGTC
GGCTTTCGCTGCTTGGCTGCGGATTGTAAATAATAGCTTAATGCGTGCAC
AGATTAAGGCTTGTTATGCTATTCACGAGAAATTAAACACGAAGGATGAG
GAAGAGGAGGAGGAAGTGCAACGAGAAGGAGATGTAGTTGTGGGGTGTCA
AGAAAAGGAGGAGCAGAAGCAGGAGCAGGAGCAGAAGGAGCAGGAAACGG
AAAAAGAGACAAAGAAGAGAGAGAAGGAAAAGGAGACAATGGACATGGAG
GCATATCGACGGTTGTGGGACTTGGACAGAATTCTCTAATGATATAGAAA
TAACGAAATCAAGATTGATAAATAAGACCAACAGGGGAGAATTTTAGAAA
ATGCGAGTAGGGTGCAAGTAACTGATGATGTAAACTAGCATG

Coding sequence (CDS) from alignment at scaffold_4:596661..602652+

>mRNA_2028 ID=mRNA_2028|Name=jgi.p|Nanoce1779_2|668757|organism=Nannochloropsis oceanica|type=CDS|length=2373bp|location=Sequence derived from alignment at scaffold_4:596661..602652+ (Nannochloropsis oceanica)
ATGGATTTTGAGACGAAGCGTTGCTCGAACGCAATTAAGAAGCTGTGCAG
CGCGGGGAATGTGACAGAGGTGTTCGCGGTGCTGGAGGATATGCTGGGGC
ATGGGCTGGTGCCGGACCTGAAGACGGTGAAGACCATCATGCGGACATGC
GTGAAGAAGCTGGCCTGGCGACGGGCGGTGCAGCTGCTGCACACAACAGG
CCTGCCGCTGGACGTGGTCATCTTCACAATGGCTATCAACACTTGCGGTA
AGGCCGGAGAGTGGGAGCAGGGCCTGCGGGTGCTGCGGGAGATGGACTCT
GAGGAGGCCAAGGCCCACGGCATCGTGCCCAACGAGGTGAGCTACGGGAC
GGCCATCTCGGCTTGCGGCAAGGCGGGCCGGTGGGAGCTGGCGCTCTCGC
TCTTAAACGAGGTCAAGGATCGTGGCCTGCTCCTCAATGATGTTTGTTAC
GGCGGGGCGATTGATGCCTGCGGGCGCGCGGGTCAGTGGCAGGAGGCACT
CAAGCTCCTGAATGAGATGACGCTGGACGGGGTGGCGGCCAATGAGGTGT
GCTACAACTCAGCCATCTCCGCCTGCGGCAAGGCCGGGGAGTGGGAGAAG
GCGGTGGCTTTGTTGCGCGAGATGCGGGAGCGGGGCCTGACGCCCGACGA
GCTGAACTATAACTCTGCTATCTCGGCCTGCGGCAAGGCGGCCCAGTGGG
CGCACGCCATTCGCCTGCTCCGCGAGATGGCCGTACGAGGGTTGTGCCCG
GATGTGGTGTCCTACGGGGCGGCCATCGATGCCTGCCGTAAGGCCGGCAA
GTACGACCGAGGCCTGGCGCTGCTGGGCGAGATGCGCCAGGTGGGCCTGG
TGCCCAACGAGGTTTGCTACCACTCGGCGGTCACGGCCTGCTCCGAGGCA
GGCCGGTGGAATGAGGCCCTGTTTGTGCTCTCGGAGATGGTCAAGCAAGG
CCTCAAGCCGGATGCCATCAGCTACAATGCGGCTGTGGAGGCCTGCGCCA
AGTCGGGAAAGTGGGACGCCCTGGTCATCCTGCTGCAGGAGACGGCTCGG
GACCCGGACACCACACTTTTGGATGCCGTCTACAACAATGCCGTCATAAC
CTGCGCCAAGTACGGCAACTGGGAGTTGGCGGCCACCGTGCTGCAGGAGA
TGGAGTATTTGGGTGGGAATGGTGGAAGTGGGGCGGGGACGCCGGGCGGC
AGCAATAGCAGCAGTCATCCGGGCTTGTCGCCCACCTCGGCCTCCTACTC
TGCTGTCATTGACGCCTGCGCCAAGGCCCTGGCCGCCGCAGGAGCAGCAG
GTGACGGGAGCCCATCCTCTTTCAACCCTCCCCCTCCCGGTGGCCTGCCC
CAGTGGGAGCTGATCCTGAGCAAGCTTGACCGCATGCGTGAGAAAGGCCT
GCTGCCCGACTCCAGCTCGTACAACGCGGCCGTACGCGCCTGTGTCTGCG
GGCCAGCCAAGCACTGGAAGAAGGCCGTGGATTTGCTGCAGGAGATGGCC
TCAAAGGGCTACCTAGTCGACCAGAGCACCTCGAACGCCGTCATGCAGGC
CTGCACTGCTGGCGTTGCCGGCGCTGCGGGTAGTGATGCTGCGGATGAGG
CAGTTGTATCATCAACAGCCGCGGGAGGGATGGGCAGACCCGACGAGACC
CATGCTGCAGCAGAACGTGAGAGGGCCTTGGCACTCCTCCGCAAGATGAT
GGCAGGCGGCTCACCTTTTGACAGCACCAGTAGCGAGTCCTCAGGTGTGC
CTTCTGGCCCTCCTGCTGCTCTTCTTTCCGCTGTGTCTTCCTCCCGCACT
TCTACAGGACTGGGCTCCGGTGCTCCCTCCTTAGCGTCTTCCACCTCTTG
CCTATTGCTTAACTCACACGGAGGAGACTCGTTTGTCGAGAGTGGGCAAG
CCCCACTTTGGGAACGGACAACCAGTATCCCCGACGAAATTGCACTCACG
AGTGGAAGCAGCGTGATTGGAGAAGTCGGTGGTCTCGGGCTGGGTGGTGA
CCTCGCAGAGATCCTTGGCCCTTCCTCCCCGACGGGCCCGGAATCCCCGC
GACCGGTGGGGTTGATCGGCAGTCCATCTTTCAGTTCTATTCCAGCTTCA
TCGACGGTTGCATATCCTCGGTCGCCTGCTATGGCGTTAGGACCTGGGAG
TCCATTTTTGAGCGCGACTAAAGGTAGCAGCACCGAGAATGATGGGAATG
GAGGAGGAAGGATGGGAAGCTTCTTGTTGCAAGCGGCGCGGCACAAGCCG
ACAGAGCAGAAGGTCGAAGTTGTGACGGGGGATAGTGATGGGGAGGGAAG
AGCCCCTGGTGATGGTGCGATGGAAAGTGAGAAAGCGGTGGGCGTTTTAA
ATTCAGGATGGAGCCAGTCGTAA

Synonyms

Publications