Properties
| Property Name | Value |
|---|
| TranscriptId | 659892 |
| Track | FilteredModels2 |
| ProteinId | 659806 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:550088..551331 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2007 ID=mRNA_2007|Name=jgi.p|Nanoce1779_2|659806|organism=Nannochloropsis oceanica|type=mRNA|length=1216bp
ATGAATCGCCCTCAAAAGCGCAATGCGATGAACAGCAAGTTCTGGGGCGA
ATGCAAAGCCGCTTTCGAGGCGCTAGGGGAGGATGGAGACGTGCGTGCTA
TTGTGCTTATGGGGGAAGGGAAGGTTTTTACCTCTGGCTTGGATTTGTCA
GATATCGGTATCGATTTGATGGGAGGGGGTGGGGATGGGGTGGACGTGGC
GCGGCAGGCTTTGAAGATTAAGAAGCATGTGACGCGGATGCAAGACGCTT
TCAACGCTATTGAGAAAATTCCCCAGCCAGTCATTGCTGCCATCCATGGG
GCATGCATCGGGGGGGGGGGTCGACTTGATCGCGGCACAGTTTTCAGTAT
CAAGGAGGTGGACATTGGTTTGGCTGCTGACCTTGGCACGTTGCAGCGAC
TCCCACGCATAACGGGGAATGAGAGTCTACTCCGCGAGCTTGCTTTCACT
GGCCGAAACTTCAATTGTACCGAAGGCCAGCTTCTCGGATTGTTCAGCCG
TGTCTTACCTTCCCCTACCGAGACAATTGCAGCTGCTACGGCTTTGGCGG
TCGAGATAGCGAATAAGAGTCCCGTGGCAGTGACGGGGACGAAAGTGAAT
CTGCTTTATTCGCGGGACCACGCGTCGGTGCAGGACGGGTTGAATCATAT
GACGACGTGGAATATGAGTGCTTTACAGAGTGAGGATATTGGAAGGGCTG
TCCAGGGGGCGATCACAAAGGAGGTGCCGACTTATTCGAAGCTGTAGGAG
GGAGGAAGAGAGGGGGATATTGAAGGAGAGCAAGAAAAATGAAACTCAAG
ACAGTACTAGGGTGCGTGTGCATGTCATGTATTTTTACTTTTTTTTTCTC
AGCGAGGCTTTGATCCACAGACAAGTATTTTGCTGCCCTCGCGTCGGGAT
GGTGGTAGTGGTGGTGATGATGCTGCCGGTAGTCTTACGTGCTATTACAG
ATACATGTGTGCAACTACAAACGCATATCGCAAGCCAAATACACATACTT
CTTCATTCTCTACTTTATCTTGGACACTTTGGCTTCGATAGGCCTTGCTC
GCCAGCTATAGCTACATATTCGTCGGTAGATTCTTCTCCTCTTTTCTCTC
ACTCATTCTCTTTCCCTTCGGCCTGCTCTAGACCTCTCCACCCCCCCTCG
CACTTTCTCTCACTGTAATATCTACACTGTGTCATTCTTTCTTCTCAACT
CAATCTCTCCTATAAC back to topprotein sequence of jgi.p|Nanoce1779_2|659806 >mRNA_2007-protein ID=mRNA_2007-protein|Name=jgi.p|Nanoce1779_2|659806|organism=Nannochloropsis oceanica|type=polypeptide|length=249bp
MNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLS
DIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHG
ACIGGGGRLDRGTVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFT
GRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVN
LLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVPTYSKL* back to topmRNA from alignment at scaffold_4:550088..551331- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2007 ID=mRNA_2007|Name=jgi.p|Nanoce1779_2|659806|organism=Nannochloropsis oceanica|type=mRNA|length=1244bp|location=Sequence derived from alignment at scaffold_4:550088..551331- (Nannochloropsis oceanica)
ATGAATCGCCCTCAAAAGCGCAATGCGATGAACAGCAAGTTCTGGGGCGA
ATGCAAAGCCGCTTTCGAGGCGCTAGGGGAGGATGGAGACGTGCGTGCTA
TTGTGCTTATGGGGGAAGGGAAGGTTTTTACCTCTGGCTTGGATTTGTCA
GATATCGGTATCGATTTGATGGGAGGGGGTGGGGATGGGGTGGACGTGGC
GCGGCAGGCTTTGAAGATTAAGAAGCATGTGACGCGGATGCAAGACGCTT
TCAACGCTATTGAGAAAATTCCCCAGCCAGTCATTGCTGCCATCCATGGG
GCATGCATCGGGGGGGGGGGTCGACTTGATCGCGGCGTGTGACATTCGTT
TGGCGTCGGCCGAGACAGTTTTCAGTATCAAGGAGGTGGACATTGGTTTG
GCTGCTGACCTTGGCACGTTGCAGCGACTCCCACGCATAACGGGGAATGA
GAGTCTACTCCGCGAGCTTGCTTTCACTGGCCGAAACTTCAATTGTACCG
AAGGCCAGCTTCTCGGATTGTTCAGCCGTGTCTTACCTTCCCCTACCGAG
ACAATTGCAGCTGCTACGGCTTTGGCGGTCGAGATAGCGAATAAGAGTCC
CGTGGCAGTGACGGGGACGAAAGTGAATCTGCTTTATTCGCGGGACCACG
CGTCGGTGCAGGACGGGTTGAATCATATGACGACGTGGAATATGAGTGCT
TTACAGAGTGAGGATATTGGAAGGGCTGTCCAGGGGGCGATCACAAAGGA
GGTGCCGACTTATTCGAAGCTGTAGGAGGGAGGAAGAGAGGGGGATATTG
AAGGAGAGCAAGAAAAATGAAACTCAAGACAGTACTAGGGTGCGTGTGCA
TGTCATGTATTTTTACTTTTTTTTTCTCAGCGAGGCTTTGATCCACAGAC
AAGTATTTTGCTGCCCTCGCGTCGGGATGGTGGTAGTGGTGGTGATGATG
CTGCCGGTAGTCTTACGTGCTATTACAGATACATGTGTGCAACTACAAAC
GCATATCGCAAGCCAAATACACATACTTCTTCATTCTCTACTTTATCTTG
GACACTTTGGCTTCGATAGGCCTTGCTCGCCAGCTATAGCTACATATTCG
TCGGTAGATTCTTCTCCTCTTTTCTCTCACTCATTCTCTTTCCCTTCGGC
CTGCTCTAGACCTCTCCACCCCCCCTCGCACTTTCTCTCACTGTAATATC
TACACTGTGTCATTCTTTCTTCTCAACTCAATCTCTCCTATAAC back to topCoding sequence (CDS) from alignment at scaffold_4:550088..551331- >mRNA_2007 ID=mRNA_2007|Name=jgi.p|Nanoce1779_2|659806|organism=Nannochloropsis oceanica|type=CDS|length=1494bp|location=Sequence derived from alignment at scaffold_4:550088..551331- (Nannochloropsis oceanica)
ACAGTTTTCAGTATCAAGGAGGTGGACATTGGTTTGGCTGCTGACCTTGG
CACGTTGCAGCGACTCCCACGCATAACGGGGAATGAGAGTCTACTCCGCG
AGCTTGCTTTCACTGGCCGAAACTTCAATTGTACCGAAGGCCAGCTTCTC
GGATTGTTCAGCCGTGTCTTACCTTCCCCTACCGAGACAATTGCAGCTGC
TACGGCTTTGGCGGTCGAGATAGCGAATAAGAGTCCCGTGGCAGTGACGG
GGACGAAAGTGAATCTGCTTTATTCGCGGGACCACGCGTCGGTGCAGGAC
GGGTTGAATCATATGACGACGTGGAATATGAGTGCTTTACAGAGTGAGGA
TATTGGAAGGGCTGTCCAGGGGGCGATCACAAAGGAGGTGCCGACTTATT
CGAAGCTGTAGATGAATCGCCCTCAAAAGCGCAATGCGATGAACAGCAAG
TTCTGGGGCGAATGCAAAGCCGCTTTCGAGGCGCTAGGGGAGGATGGAGA
CGTGCGTGCTATTGTGCTTATGGGGGAAGGGAAGGTTTTTACCTCTGGCT
TGGATTTGTCAGATATCGGTATCGATTTGATGGGAGGGGGTGGGGATGGG
GTGGACGTGGCGCGGCAGGCTTTGAAGATTAAGAAGCATGTGACGCGGAT
GCAAGACGCTTTCAACGCTATTGAGAAAATTCCCCAGCCAGTCATTGCTG
CCATCCATGGGGCATGCATCGGGGGGGGGGGTCGACTTGATCGCGGCACA
GTTTTCAGTATCAAGGAGGTGGACATTGGTTTGGCTGCTGACCTTGGCAC
GTTGCAGCGACTCCCACGCATAACGGGGAATGAGAGTCTACTCCGCGAGC
TTGCTTTCACTGGCCGAAACTTCAATTGTACCGAAGGCCAGCTTCTCGGA
TTGTTCAGCCGTGTCTTACCTTCCCCTACCGAGACAATTGCAGCTGCTAC
GGCTTTGGCGGTCGAGATAGCGAATAAGAGTCCCGTGGCAGTGACGGGGA
CGAAAGTGAATCTGCTTTATTCGCGGGACCACGCGTCGGTGCAGGACGGG
TTGAATCATATGACGACGTGGAATATGAGTGCTTTACAGAGTGAGGATAT
TGGAAGGGCTGTCCAGGGGGCGATCACAAAGGAGGTGCCGACTTATTCGA
AGCTGTAGATGAATCGCCCTCAAAAGCGCAATGCGATGAACAGCAAGTTC
TGGGGCGAATGCAAAGCCGCTTTCGAGGCGCTAGGGGAGGATGGAGACGT
GCGTGCTATTGTGCTTATGGGGGAAGGGAAGGTTTTTACCTCTGGCTTGG
ATTTGTCAGATATCGGTATCGATTTGATGGGAGGGGGTGGGGATGGGGTG
GACGTGGCGCGGCAGGCTTTGAAGATTAAGAAGCATGTGACGCGGATGCA
AGACGCTTTCAACGCTATTGAGAAAATTCCCCAGCCAGTCATTGCTGCCA
TCCATGGGGCATGCATCGGGGGGGGGGGTCGACTTGATCGCGGC back to top
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