jgi.p|Nanoce1779_2|628129, mRNA_1951 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|628129
Unique Name	mRNA_1951
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5503
Alignment location	scaffold_4:423490..428992 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	628215
Track	FilteredModels2
ProteinId	628129

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_4	supercontig	scaffold_4:423490..428992 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|628129	gene_1951	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|628129	mRNA_1951-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1951	CDS_1951	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_4:423490..428992-
coding sequence from alignment at scaffold_4:423490..428992-

mRNA sequence

>mRNA_1951 ID=mRNA_1951|Name=jgi.p|Nanoce1779_2|628129|organism=Nannochloropsis oceanica|type=mRNA|length=5503bp
CTGCTGCTGCTGCTGCTGCTGCTCATTATCATCCCCTCCTCCTCCATCCC
CAGACCCGCCACGAACAGCATCCCCTATATTTTGATGAGCCGCTAGTAGA
AGGGGTCCAACCTTGTAACCAGGATTAGGGTGATGGTAGCGGTACTGCAG
CTGCTGCAGCTGCTGCCGCTGCTGAAACGAGGCATAGTGAGAAGGTGGGG
ACTTATAATAGCGTAACCCATCCCCCGCTCCATTCGCTCCGCCCGCACTT
CCACTCAAACCCAAAATATCCTGACTTGCTGCCCGCCACTTCATGTAACT
GCTGGGACTACTACCCCTACCCATCCCTCCAGCGGCAGCAGCCGCAGCAG
CAGGACTGCCCCCTGGGATCCACACCGCGTCGACAGCCCGTCGAAGCCAA
GCCTTGGTAGCACTAATAAAAGCAGCTCTCCCATGCATGGACCTAATTTT
ACTCACGTCCTCCCCATCCTCGTCATGGCAAAGATGATTGAGGCTGTGAT
GACCTACGCTGTGATGACCTACCCCTCCTCCACCGATACCATTATTATTG
TATCGACTCCCCGTGGCAGCTGCAGCGCCCGCAGAGCGATAATACGCATG
CTGCGAGGTGGACAAGGAGGACGAAGCAGCCTCCAAAGACTCACTAGAAG
TCTGCGGAATGTGTCGTAAGAAGAGCATTGGATTATTGTTTTGCTTGCCG
CGTGCAGTTGGCCCTGCGGGAATCCCAGTCGCCCCATCTGTGGGTGAAGT
ACTCATGAGAAGGACGAGGATGAGGGCGAAGTGGCGTGTAGACACCGCTT
TTGTAAGCGTTTGAGAGACGAGGGAGTAGAACGAGAAAGGGACTAGAGCT
GGTGATGATGGTGCTGGTGCTGGCACTGCTCGAGACTTGAAGGGACCCAT
GTACGCTTGCAGCCTCCTCTCAAGCCCTGAACATACTGCGTGACCCGCCG
AGCTGCTGCTAGGTGGTGTCCTGTGAGAGCTGTCGAGGGGATGAAATGTG
GAAATAGCAGGGGTGTTAGGTGGCCAGCAGCAGTTGCGAAGTGAAGGAAG
GGGAGAGGGGCTGTCCTACCCAGGTAGCTAGGACACGGTCGACGACACTG
GGCACGCGGAAGTTCAAGCCGATAAGAGCTCGCCCATGCACCACAACTGT
CCGATGAGGGAATATCTGTAGAGCGTAGGGTGACGCGTCCATGTGTGTGT
TTGTTGTTTCGTGTGGGGTGAGGGTGGGTCCGAGAACGCGCTGCAACGGG
CCGCGCTTCAATATTCAAGGAGGCCATGCTCACCGACAACTAGCACACGC
TCACACCCAAACAAGTGCACGACAACAATCCGAACCCTCTTCATAACACA
GGGTGAGTCCACCTGGAGTCAGGCTCGAGAGCCCTCGCCGCAGAGATAGC
GGTAACCCACGCAAACGCCTAGCATTAATTCTCTGGGTCATCCGTCATCG
CACGCACGTCCCGCCGCTTGTTCGACATAGGTATCCTCCCCGGCTCCGCT
TCACTGTCCCGCCCTTTCGAAAGCAACTGCTAGCGATGCCCCCTGGGCGC
ACATGCGGCACACATTCCAGACTCGCCTCTCCACCCACATTACCCACCCT
GGGCGGATGCAATTCGTCACGCAGCATTGGCGGTGGTAGTTGCAGCTTCA
TCAATCCCGTCACGGGAGGGGAGGACTACACGCAGGACGGTTTAGCCTTC
TGGAAGGAGGCATTTGGTCGTGGACGTTTGGTGGCATGGCCTCGATTTGT
CGAGGCGGTGGGAGAAATGATGCGGACGACTTACCCGGGGGAGCTGCAAG
GTTTTGTGGAATTGGAAGATGTGCTTCGTTATTTGATCGATCGAAGCGAG
GGGAACCGTGCACGGAATCTGATCGCCTTAGAGGAATGGGCTGTGTTTTT
ACATCGATTCGGTCCGCTGGAGTGCTGTATCGGAAAAGCGGCGCGGTCAT
TTTTTGTGGTGACGGAGGGAGGGACGGAGGGATGGGGAGAGATGGTGCCT
TGGTTTCACGGGAATATCACAAGGCAAAAAGCCAAAGAGATTGTGCTCGG
GGGGGGAGCGGGAAAAAGGCCAGGAAGTTTTTTGGTGCGTTTCAGCGCAA
CGAACCCCCGAAATTTCACCCTGACCTATTTGGACGAGGGGGAGCTGAAG
CACAAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCAAGTGATATCCCC
TCTACCAGCAACGTACAAGAATGTCCTCCTTCACAACCGCGGTCCACTCG
GCTTTGCTCTGGATGCATCAGCTCCCGAAGAAGAATGTTTTCCCACCGTG
CGTGAGCTCGTTGATTGCAAGCATGGGTGGAGCCTGCCCTGTTCCTCTGA
ACTCGCCGCGGGCTTCCGAAATGAGGTGCGGCAACGACGCAGCAGCAGCA
CCACCACCACCACAACCACAACCACCATCACCACCAACAATAGCAGCGTC
AGTTGCAGGAGCAGCCCTCCCATCCCTCTACACCAGCATACCCCCCCCTC
TCTGGCGTGGACACACAACAAGAGCGTGACGAAAAGTAGCTGTAACGGTC
TCACCACCGCGCCCTCCTCCTTGTCCTCCTCCTCGACCTCGATTGACTCA
GCAGTAGCAGCAGTGTCAGCTGAAGGCTCTAGCGATGCTCACCATGACCG
TCATAATGGGCAGCAGCAAAGAAGATTCAATGGTAAAAAAAGTCATTCCT
CTATAGGCTGGGGAGAGGGAGCGAGGGAAGGAGGGACGCGACGGTTATCA
GGACCCCTTCGAAATGACCATGGGTTAAATGGAAGGGCAATGAGCGTTGG
AGGGGGGAAGGGGGGAGTGGGCTTGTCGAAGGGGATGATGGACTCGCCGG
TATTTTCACCGGAGGGGAACTGGGAGGATGAGGAAGGGGGGGAGGGGGAG
GAGGACGAGGCCGAACTAGAGAGGGAGGAAGAGGTGAGAAGAGATGAGCG
TGCACACAGAAATTTGGATGGAGAGGACGAGGATGCGGACGATGAGGAGG
ACGATGACGAGGAGGATGATGGTGTAAGAAGTCAGACGACGCTCGCATCC
TCCGGGGGGAAAGTGCAAGGGAGGAGGAGAAGGAGAAGGCGGAGGAGGAG
TGGTAGCAGCAACTCCCCTGACGACGACAACGACGACGACGACGACGATA
TTCTCAATGATGAGGATGAGGACGACGATGATGATGATAATGATGATGAG
GAGGAGGAGGAGGAGGAGGATGAAGAAGAGGAAACCGAAGGCCACGAGCC
TTCTGAACTGGAAATGCGACAACGCCTCCGTTTGCTCCACACCATGTCTT
CTGTCTCTTCCTTGGACGAAGCCGCCACCTTACTAAACAAAGCAATGCTG
TCCACTGCGTCGGGGAAATACGAGGAAGCTCTCCGTCTGTTGGATGACGT
CTTGGGCGTCGCGGGGGCCGAATACGCCACCATGGTAGAGGCAGACATGC
AGGCCCGTGCAGCCAAAGTAAAGGGCACAATACTGCAAGAAATGGGTCTC
ATGAAAGAAGCGAGCGTGTGGTACGAGCTTTCTGTCAGGGCGGGCCACCT
ACTCCTACGGCAGGTCCCTATTTCCGAAGATATAGGAGAGTATTTTGCAC
CCTTACGGTACGTGCATAACCAGCTTACGCAGTTCTATTTGAGCGTCCAC
GCGTACAATTTAGTCTTAGAGCACTTCGAGCAGCTGCTTGCGTTGACTGA
CAATGCGGCCGAGCGACGGTTGATTCTCAGGGAATTTGAACGGTTGTCGC
TCGAGCATGATTTCTGGCAAGACGTAACGCCGGGTATGCTGGACCAGGAG
CTGGAGCAAGGGAAGGGATGGTATAGGGAGGGTAAGCTAGAGGAGGCCAC
ATTGCAGTTCAGGCGGGTGGTGCAACTTGCCCGATTGGCTTCGTTTTCCT
CGGCGAGTGGGGGGAGAAGGTTGATGGAAGCACGGGCGTTGGGGAATTAT
GCAACGGTGCTGAAAGATTTGCACAAATGTGACGACGCGATTCTGAGCTA
TCGGTTGTGTTGTCGGATTTTGCAGGAGTTGGATGAAGGCCAGATGGAGA
GGAGAATGCTGAATGGGTTGAGCCTGTGTTTGATGGAGAGGGAGAGGTGG
ATGGATGCGAAGGAGGTGTGTGGGAAACTTTTGGGAGTGACGGAAAGGGA
GGACAATATGACTTTGGTCCATGCGAGGATGGAGGAAATTGAAGAACAAT
TGAGGAAGGAGGAGGAAATGAAAGAGGAAGGGGAGGAGGGATGGGAAGAT
GCGCAAGGAGGGTGAGTCATAGCATGAAATGATTAGGAAAGCAATGTGAT
CAAATTTCGACACCTTGATCTCGGCTACTGTTTGGTTGGGTTGGGGTTGG
TGCTGACGAGCCATGTTCTTGTCGTCGTTTTTGATGTTGATTTACCTTCA
AAAGAACTTTATATGGAAGCACATCAAAGAGGCGCTGTCAGCAGAATGCA
CACAAACAACTAACTATGTCCACCTGCCTCTCTACCCACCTCTATCCACT
TTCTTGCTTTCTCTTTCCTGGGGCCGAGGCGCCGGTGGGCCAAGAAAGAG
CGACAGCCGCAACACTTACTTTCTACTCATGCAATCATCAAGCTCCTTTT
CCCACCTTCCCATTTCGTTCCTTCTCTTCCCCTCTCACTTACGCCTCTTT
CCGTACACAATAAAAAATGGATTCAACGCCTCGGGCTTATTATACGCCAC
CGGAACCCCGGGGGTGCAAGCCTTCCCTCCCTCTGCCTGCAGCACTTCCC
CTCCCGCCGCCTCCACAATGGCATGCGATGCACACGTGTCCCATTCACAG
GTGGGGGCCAAGCGCGGGTACACGTGGGCCTCGCCCTCTGCCACCATCAG
CAATTTTAATGACGATCCCAACGCCTTGAGCGTCGGCTCCTCATATTTAC
TAATAAAGGCCTCTGTCTCCGGGGTGTTGTGCGATGCCGATGCCACAATC
GCAAGCCCCGAGTCAGTCTCGCTGAATTCCTTGCACTGGATAGGGATGGA
TTCCCCGCCCGCAACCTCCACGAAGGCCCCTTGTCCCTTGGCACCAAAAT
ATGTCTTGGACGGCTCCATGGCCGGCACGTGTACCACCCCGAATATAGGA
GAATTGCCTTGACACAAGCCAATGTTCACCGTGAACTGACCGTTGCGCTT
GAGAAATTCCTTAGTCCCGTCCAAAGGGTCGATGCACCAGTAGTAAGGCC
ATTGGCTGCGTTCGTCGTAGGGCAAAAGCTTATTTTCTTCCGAGACTATG
GGGATGGAAGGGTACTTCTCCTTCAGGGACACACAAATCAGATTGTTGGC
TGCTAAGTCCGCGGCGGTCAGGGGGGAGTCATCGGACTTGGCTTTGACGT
CCCAGCTGACCGTGTCAGGGAAGGAGTAGATGGCCATGATGGCGTCTCCG
GCAGTTTTGGCGATGGAGACCACGTCCTTGGCCAGAATTTTAACGGCGCC
GGCCTGGATGATCATGATAACGGGAAACGAATTTACTTGTGCTAGTAATT
GCT

protein sequence of jgi.p|Nanoce1779_2|628129

>mRNA_1951-protein ID=mRNA_1951-protein|Name=jgi.p|Nanoce1779_2|628129|organism=Nannochloropsis oceanica|type=polypeptide|length=910bp
MPPGRTCGTHSRLASPPTLPTLGGCNSSRSIGGGSCSFINPVTGGEDYTQ
DGLAFWKEAFGRGRLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYL
IDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGW
GEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLD
EGELKHKQQQQQQQQQQQVISPLPATYKNVLLHNRGPLGFALDASAPEEE
CFPTVRELVDCKHGWSLPCSSELAAGFRNEVRQRRSSSTTTTTTTTTITT
NNSSVSCRSSPPIPLHQHTPPSLAWTHNKSVTKSSCNGLTTAPSSLSSSS
TSIDSAVAAVSAEGSSDAHHDRHNGQQQRRFNGKKSHSSIGWGEGAREGG
TRRLSGPLRNDHGLNGRAMSVGGGKGGVGLSKGMMDSPVFSPEGNWEDEE
GGEGEEDEAELEREEEVRRDERAHRNLDGEDEDADDEEDDDEEDDGVRSQ
TTLASSGGKVQGRRRRRRRRRSGSSNSPDDDNDDDDDDILNDEDEDDDDD
DNDDEEEEEEEDEEEETEGHEPSELEMRQRLRLLHTMSSVSSLDEAATLL
NKAMLSTASGKYEEALRLLDDVLGVAGAEYATMVEADMQARAAKVKGTIL
QEMGLMKEASVWYELSVRAGHLLLRQVPISEDIGEYFAPLRYVHNQLTQF
YLSVHAYNLVLEHFEQLLALTDNAAERRLILREFERLSLEHDFWQDVTPG
MLDQELEQGKGWYREGKLEEATLQFRRVVQLARLASFSSASGGRRLMEAR
ALGNYATVLKDLHKCDDAILSYRLCCRILQELDEGQMERRMLNGLSLCLM
ERERWMDAKEVCGKLLGVTEREDNMTLVHARMEEIEEQLRKEEEMKEEGE
EGWEDAQGG*

mRNA from alignment at scaffold_4:423490..428992-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1951 ID=mRNA_1951|Name=jgi.p|Nanoce1779_2|628129|organism=Nannochloropsis oceanica|type=mRNA|length=5503bp|location=Sequence derived from alignment at scaffold_4:423490..428992- (Nannochloropsis oceanica)
CTGCTGCTGCTGCTGCTGCTGCTCATTATCATCCCCTCCTCCTCCATCCC
CAGACCCGCCACGAACAGCATCCCCTATATTTTGATGAGCCGCTAGTAGA
AGGGGTCCAACCTTGTAACCAGGATTAGGGTGATGGTAGCGGTACTGCAG
CTGCTGCAGCTGCTGCCGCTGCTGAAACGAGGCATAGTGAGAAGGTGGGG
ACTTATAATAGCGTAACCCATCCCCCGCTCCATTCGCTCCGCCCGCACTT
CCACTCAAACCCAAAATATCCTGACTTGCTGCCCGCCACTTCATGTAACT
GCTGGGACTACTACCCCTACCCATCCCTCCAGCGGCAGCAGCCGCAGCAG
CAGGACTGCCCCCTGGGATCCACACCGCGTCGACAGCCCGTCGAAGCCAA
GCCTTGGTAGCACTAATAAAAGCAGCTCTCCCATGCATGGACCTAATTTT
ACTCACGTCCTCCCCATCCTCGTCATGGCAAAGATGATTGAGGCTGTGAT
GACCTACGCTGTGATGACCTACCCCTCCTCCACCGATACCATTATTATTG
TATCGACTCCCCGTGGCAGCTGCAGCGCCCGCAGAGCGATAATACGCATG
CTGCGAGGTGGACAAGGAGGACGAAGCAGCCTCCAAAGACTCACTAGAAG
TCTGCGGAATGTGTCGTAAGAAGAGCATTGGATTATTGTTTTGCTTGCCG
CGTGCAGTTGGCCCTGCGGGAATCCCAGTCGCCCCATCTGTGGGTGAAGT
ACTCATGAGAAGGACGAGGATGAGGGCGAAGTGGCGTGTAGACACCGCTT
TTGTAAGCGTTTGAGAGACGAGGGAGTAGAACGAGAAAGGGACTAGAGCT
GGTGATGATGGTGCTGGTGCTGGCACTGCTCGAGACTTGAAGGGACCCAT
GTACGCTTGCAGCCTCCTCTCAAGCCCTGAACATACTGCGTGACCCGCCG
AGCTGCTGCTAGGTGGTGTCCTGTGAGAGCTGTCGAGGGGATGAAATGTG
GAAATAGCAGGGGTGTTAGGTGGCCAGCAGCAGTTGCGAAGTGAAGGAAG
GGGAGAGGGGCTGTCCTACCCAGGTAGCTAGGACACGGTCGACGACACTG
GGCACGCGGAAGTTCAAGCCGATAAGAGCTCGCCCATGCACCACAACTGT
CCGATGAGGGAATATCTGTAGAGCGTAGGGTGACGCGTCCATGTGTGTGT
TTGTTGTTTCGTGTGGGGTGAGGGTGGGTCCGAGAACGCGCTGCAACGGG
CCGCGCTTCAATATTCAAGGAGGCCATGCTCACCGACAACTAGCACACGC
TCACACCCAAACAAGTGCACGACAACAATCCGAACCCTCTTCATAACACA
GGGTGAGTCCACCTGGAGTCAGGCTCGAGAGCCCTCGCCGCAGAGATAGC
GGTAACCCACGCAAACGCCTAGCATTAATTCTCTGGGTCATCCGTCATCG
CACGCACGTCCCGCCGCTTGTTCGACATAGGTATCCTCCCCGGCTCCGCT
TCACTGTCCCGCCCTTTCGAAAGCAACTGCTAGCGATGCCCCCTGGGCGC
ACATGCGGCACACATTCCAGACTCGCCTCTCCACCCACATTACCCACCCT
GGGCGGATGCAATTCGTCACGCAGCATTGGCGGTGGTAGTTGCAGCTTCA
TCAATCCCGTCACGGGAGGGGAGGACTACACGCAGGACGGTTTAGCCTTC
TGGAAGGAGGCATTTGGTCGTGGACGTTTGGTGGCATGGCCTCGATTTGT
CGAGGCGGTGGGAGAAATGATGCGGACGACTTACCCGGGGGAGCTGCAAG
GTTTTGTGGAATTGGAAGATGTGCTTCGTTATTTGATCGATCGAAGCGAG
GGGAACCGTGCACGGAATCTGATCGCCTTAGAGGAATGGGCTGTGTTTTT
ACATCGATTCGGTCCGCTGGAGTGCTGTATCGGAAAAGCGGCGCGGTCAT
TTTTTGTGGTGACGGAGGGAGGGACGGAGGGATGGGGAGAGATGGTGCCT
TGGTTTCACGGGAATATCACAAGGCAAAAAGCCAAAGAGATTGTGCTCGG
GGGGGGAGCGGGAAAAAGGCCAGGAAGTTTTTTGGTGCGTTTCAGCGCAA
CGAACCCCCGAAATTTCACCCTGACCTATTTGGACGAGGGGGAGCTGAAG
CACAAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCAAGTGATATCCCC
TCTACCAGCAACGTACAAGAATGTCCTCCTTCACAACCGCGGTCCACTCG
GCTTTGCTCTGGATGCATCAGCTCCCGAAGAAGAATGTTTTCCCACCGTG
CGTGAGCTCGTTGATTGCAAGCATGGGTGGAGCCTGCCCTGTTCCTCTGA
ACTCGCCGCGGGCTTCCGAAATGAGGTGCGGCAACGACGCAGCAGCAGCA
CCACCACCACCACAACCACAACCACCATCACCACCAACAATAGCAGCGTC
AGTTGCAGGAGCAGCCCTCCCATCCCTCTACACCAGCATACCCCCCCCTC
TCTGGCGTGGACACACAACAAGAGCGTGACGAAAAGTAGCTGTAACGGTC
TCACCACCGCGCCCTCCTCCTTGTCCTCCTCCTCGACCTCGATTGACTCA
GCAGTAGCAGCAGTGTCAGCTGAAGGCTCTAGCGATGCTCACCATGACCG
TCATAATGGGCAGCAGCAAAGAAGATTCAATGGTAAAAAAAGTCATTCCT
CTATAGGCTGGGGAGAGGGAGCGAGGGAAGGAGGGACGCGACGGTTATCA
GGACCCCTTCGAAATGACCATGGGTTAAATGGAAGGGCAATGAGCGTTGG
AGGGGGGAAGGGGGGAGTGGGCTTGTCGAAGGGGATGATGGACTCGCCGG
TATTTTCACCGGAGGGGAACTGGGAGGATGAGGAAGGGGGGGAGGGGGAG
GAGGACGAGGCCGAACTAGAGAGGGAGGAAGAGGTGAGAAGAGATGAGCG
TGCACACAGAAATTTGGATGGAGAGGACGAGGATGCGGACGATGAGGAGG
ACGATGACGAGGAGGATGATGGTGTAAGAAGTCAGACGACGCTCGCATCC
TCCGGGGGGAAAGTGCAAGGGAGGAGGAGAAGGAGAAGGCGGAGGAGGAG
TGGTAGCAGCAACTCCCCTGACGACGACAACGACGACGACGACGACGATA
TTCTCAATGATGAGGATGAGGACGACGATGATGATGATAATGATGATGAG
GAGGAGGAGGAGGAGGAGGATGAAGAAGAGGAAACCGAAGGCCACGAGCC
TTCTGAACTGGAAATGCGACAACGCCTCCGTTTGCTCCACACCATGTCTT
CTGTCTCTTCCTTGGACGAAGCCGCCACCTTACTAAACAAAGCAATGCTG
TCCACTGCGTCGGGGAAATACGAGGAAGCTCTCCGTCTGTTGGATGACGT
CTTGGGCGTCGCGGGGGCCGAATACGCCACCATGGTAGAGGCAGACATGC
AGGCCCGTGCAGCCAAAGTAAAGGGCACAATACTGCAAGAAATGGGTCTC
ATGAAAGAAGCGAGCGTGTGGTACGAGCTTTCTGTCAGGGCGGGCCACCT
ACTCCTACGGCAGGTCCCTATTTCCGAAGATATAGGAGAGTATTTTGCAC
CCTTACGGTACGTGCATAACCAGCTTACGCAGTTCTATTTGAGCGTCCAC
GCGTACAATTTAGTCTTAGAGCACTTCGAGCAGCTGCTTGCGTTGACTGA
CAATGCGGCCGAGCGACGGTTGATTCTCAGGGAATTTGAACGGTTGTCGC
TCGAGCATGATTTCTGGCAAGACGTAACGCCGGGTATGCTGGACCAGGAG
CTGGAGCAAGGGAAGGGATGGTATAGGGAGGGTAAGCTAGAGGAGGCCAC
ATTGCAGTTCAGGCGGGTGGTGCAACTTGCCCGATTGGCTTCGTTTTCCT
CGGCGAGTGGGGGGAGAAGGTTGATGGAAGCACGGGCGTTGGGGAATTAT
GCAACGGTGCTGAAAGATTTGCACAAATGTGACGACGCGATTCTGAGCTA
TCGGTTGTGTTGTCGGATTTTGCAGGAGTTGGATGAAGGCCAGATGGAGA
GGAGAATGCTGAATGGGTTGAGCCTGTGTTTGATGGAGAGGGAGAGGTGG
ATGGATGCGAAGGAGGTGTGTGGGAAACTTTTGGGAGTGACGGAAAGGGA
GGACAATATGACTTTGGTCCATGCGAGGATGGAGGAAATTGAAGAACAAT
TGAGGAAGGAGGAGGAAATGAAAGAGGAAGGGGAGGAGGGATGGGAAGAT
GCGCAAGGAGGGTGAGTCATAGCATGAAATGATTAGGAAAGCAATGTGAT
CAAATTTCGACACCTTGATCTCGGCTACTGTTTGGTTGGGTTGGGGTTGG
TGCTGACGAGCCATGTTCTTGTCGTCGTTTTTGATGTTGATTTACCTTCA
AAAGAACTTTATATGGAAGCACATCAAAGAGGCGCTGTCAGCAGAATGCA
CACAAACAACTAACTATGTCCACCTGCCTCTCTACCCACCTCTATCCACT
TTCTTGCTTTCTCTTTCCTGGGGCCGAGGCGCCGGTGGGCCAAGAAAGAG
CGACAGCCGCAACACTTACTTTCTACTCATGCAATCATCAAGCTCCTTTT
CCCACCTTCCCATTTCGTTCCTTCTCTTCCCCTCTCACTTACGCCTCTTT
CCGTACACAATAAAAAATGGATTCAACGCCTCGGGCTTATTATACGCCAC
CGGAACCCCGGGGGTGCAAGCCTTCCCTCCCTCTGCCTGCAGCACTTCCC
CTCCCGCCGCCTCCACAATGGCATGCGATGCACACGTGTCCCATTCACAG
GTGGGGGCCAAGCGCGGGTACACGTGGGCCTCGCCCTCTGCCACCATCAG
CAATTTTAATGACGATCCCAACGCCTTGAGCGTCGGCTCCTCATATTTAC
TAATAAAGGCCTCTGTCTCCGGGGTGTTGTGCGATGCCGATGCCACAATC
GCAAGCCCCGAGTCAGTCTCGCTGAATTCCTTGCACTGGATAGGGATGGA
TTCCCCGCCCGCAACCTCCACGAAGGCCCCTTGTCCCTTGGCACCAAAAT
ATGTCTTGGACGGCTCCATGGCCGGCACGTGTACCACCCCGAATATAGGA
GAATTGCCTTGACACAAGCCAATGTTCACCGTGAACTGACCGTTGCGCTT
GAGAAATTCCTTAGTCCCGTCCAAAGGGTCGATGCACCAGTAGTAAGGCC
ATTGGCTGCGTTCGTCGTAGGGCAAAAGCTTATTTTCTTCCGAGACTATG
GGGATGGAAGGGTACTTCTCCTTCAGGGACACACAAATCAGATTGTTGGC
TGCTAAGTCCGCGGCGGTCAGGGGGGAGTCATCGGACTTGGCTTTGACGT
CCCAGCTGACCGTGTCAGGGAAGGAGTAGATGGCCATGATGGCGTCTCCG
GCAGTTTTGGCGATGGAGACCACGTCCTTGGCCAGAATTTTAACGGCGCC
GGCCTGGATGATCATGATAACGGGAAACGAATTTACTTGTGCTAGTAATT
GCT

Coding sequence (CDS) from alignment at scaffold_4:423490..428992-

>mRNA_1951 ID=mRNA_1951|Name=jgi.p|Nanoce1779_2|628129|organism=Nannochloropsis oceanica|type=CDS|length=2730bp|location=Sequence derived from alignment at scaffold_4:423490..428992- (Nannochloropsis oceanica)
ATGCCCCCTGGGCGCACATGCGGCACACATTCCAGACTCGCCTCTCCACC
CACATTACCCACCCTGGGCGGATGCAATTCGTCACGCAGCATTGGCGGTG
GTAGTTGCAGCTTCATCAATCCCGTCACGGGAGGGGAGGACTACACGCAG
GACGGTTTAGCCTTCTGGAAGGAGGCATTTGGTCGTGGACGTTTGGTGGC
ATGGCCTCGATTTGTCGAGGCGGTGGGAGAAATGATGCGGACGACTTACC
CGGGGGAGCTGCAAGGTTTTGTGGAATTGGAAGATGTGCTTCGTTATTTG
ATCGATCGAAGCGAGGGGAACCGTGCACGGAATCTGATCGCCTTAGAGGA
ATGGGCTGTGTTTTTACATCGATTCGGTCCGCTGGAGTGCTGTATCGGAA
AAGCGGCGCGGTCATTTTTTGTGGTGACGGAGGGAGGGACGGAGGGATGG
GGAGAGATGGTGCCTTGGTTTCACGGGAATATCACAAGGCAAAAAGCCAA
AGAGATTGTGCTCGGGGGGGGAGCGGGAAAAAGGCCAGGAAGTTTTTTGG
TGCGTTTCAGCGCAACGAACCCCCGAAATTTCACCCTGACCTATTTGGAC
GAGGGGGAGCTGAAGCACAAGCAGCAACAGCAGCAGCAACAGCAGCAGCA
GCAAGTGATATCCCCTCTACCAGCAACGTACAAGAATGTCCTCCTTCACA
ACCGCGGTCCACTCGGCTTTGCTCTGGATGCATCAGCTCCCGAAGAAGAA
TGTTTTCCCACCGTGCGTGAGCTCGTTGATTGCAAGCATGGGTGGAGCCT
GCCCTGTTCCTCTGAACTCGCCGCGGGCTTCCGAAATGAGGTGCGGCAAC
GACGCAGCAGCAGCACCACCACCACCACAACCACAACCACCATCACCACC
AACAATAGCAGCGTCAGTTGCAGGAGCAGCCCTCCCATCCCTCTACACCA
GCATACCCCCCCCTCTCTGGCGTGGACACACAACAAGAGCGTGACGAAAA
GTAGCTGTAACGGTCTCACCACCGCGCCCTCCTCCTTGTCCTCCTCCTCG
ACCTCGATTGACTCAGCAGTAGCAGCAGTGTCAGCTGAAGGCTCTAGCGA
TGCTCACCATGACCGTCATAATGGGCAGCAGCAAAGAAGATTCAATGGTA
AAAAAAGTCATTCCTCTATAGGCTGGGGAGAGGGAGCGAGGGAAGGAGGG
ACGCGACGGTTATCAGGACCCCTTCGAAATGACCATGGGTTAAATGGAAG
GGCAATGAGCGTTGGAGGGGGGAAGGGGGGAGTGGGCTTGTCGAAGGGGA
TGATGGACTCGCCGGTATTTTCACCGGAGGGGAACTGGGAGGATGAGGAA
GGGGGGGAGGGGGAGGAGGACGAGGCCGAACTAGAGAGGGAGGAAGAGGT
GAGAAGAGATGAGCGTGCACACAGAAATTTGGATGGAGAGGACGAGGATG
CGGACGATGAGGAGGACGATGACGAGGAGGATGATGGTGTAAGAAGTCAG
ACGACGCTCGCATCCTCCGGGGGGAAAGTGCAAGGGAGGAGGAGAAGGAG
AAGGCGGAGGAGGAGTGGTAGCAGCAACTCCCCTGACGACGACAACGACG
ACGACGACGACGATATTCTCAATGATGAGGATGAGGACGACGATGATGAT
GATAATGATGATGAGGAGGAGGAGGAGGAGGAGGATGAAGAAGAGGAAAC
CGAAGGCCACGAGCCTTCTGAACTGGAAATGCGACAACGCCTCCGTTTGC
TCCACACCATGTCTTCTGTCTCTTCCTTGGACGAAGCCGCCACCTTACTA
AACAAAGCAATGCTGTCCACTGCGTCGGGGAAATACGAGGAAGCTCTCCG
TCTGTTGGATGACGTCTTGGGCGTCGCGGGGGCCGAATACGCCACCATGG
TAGAGGCAGACATGCAGGCCCGTGCAGCCAAAGTAAAGGGCACAATACTG
CAAGAAATGGGTCTCATGAAAGAAGCGAGCGTGTGGTACGAGCTTTCTGT
CAGGGCGGGCCACCTACTCCTACGGCAGGTCCCTATTTCCGAAGATATAG
GAGAGTATTTTGCACCCTTACGGTACGTGCATAACCAGCTTACGCAGTTC
TATTTGAGCGTCCACGCGTACAATTTAGTCTTAGAGCACTTCGAGCAGCT
GCTTGCGTTGACTGACAATGCGGCCGAGCGACGGTTGATTCTCAGGGAAT
TTGAACGGTTGTCGCTCGAGCATGATTTCTGGCAAGACGTAACGCCGGGT
ATGCTGGACCAGGAGCTGGAGCAAGGGAAGGGATGGTATAGGGAGGGTAA
GCTAGAGGAGGCCACATTGCAGTTCAGGCGGGTGGTGCAACTTGCCCGAT
TGGCTTCGTTTTCCTCGGCGAGTGGGGGGAGAAGGTTGATGGAAGCACGG
GCGTTGGGGAATTATGCAACGGTGCTGAAAGATTTGCACAAATGTGACGA
CGCGATTCTGAGCTATCGGTTGTGTTGTCGGATTTTGCAGGAGTTGGATG
AAGGCCAGATGGAGAGGAGAATGCTGAATGGGTTGAGCCTGTGTTTGATG
GAGAGGGAGAGGTGGATGGATGCGAAGGAGGTGTGTGGGAAACTTTTGGG
AGTGACGGAAAGGGAGGACAATATGACTTTGGTCCATGCGAGGATGGAGG
AAATTGAAGAACAATTGAGGAAGGAGGAGGAAATGAAAGAGGAAGGGGAG
GAGGGATGGGAAGATGCGCAAGGAGGGTGA

Synonyms

Publications