jgi.p|Nanoce1779_2|578449, mRNA_1932 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|578449
Unique Name	mRNA_1932
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4381
Alignment location	scaffold_4:381624..386004 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	578535
Track	FilteredModels2
ProteinId	578449

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_4	supercontig	scaffold_4:381624..386004 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|578449	gene_1932	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|578449	mRNA_1932-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1932	CDS_1932	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_4:381624..386004+
coding sequence from alignment at scaffold_4:381624..386004+

mRNA sequence

>mRNA_1932 ID=mRNA_1932|Name=jgi.p|Nanoce1779_2|578449|organism=Nannochloropsis oceanica|type=mRNA|length=4381bp
AATAGAAGAACCTACGTCATGACTACATTGGCACTGAGTAGCTTGGCATC
GGGAATTTCAGGGAGTGGGGATGGAGCTAGCAATACCCTATCCTCGTCTC
CCTTCTCGACCTCCTCTCAAGCGCTGTCGCAAGCCCTCGCTGCATACTGC
GCGGCCGTCGACCCTACTGCAGGGACCGCTGGGGAAGGGACGAAGCCCCC
ACCACCTTCCTCCTTTTTACCCAAGTCTTCTCAAGACGCCTCCATTCCGC
ACCTTAACACGGTACTCCTGCATGTACAACGTAGCAAGCGCTTCGACGAA
TTGGTGGGGCAAATGGGGCCTTACCTCACGAGCGAGGAAGGACGAGTTCG
AACCCGCGCCGCTGCGTTGTTGGGTGAAATCTTGAACCGCCTTCCAAAGC
TACCTCTCACCTGCGCGGCTGTCCACCACTTTGTGGATTTCTTTTCGAGT
CGCCTCTCCGATTTCCCCTCTGTAGCCGGCTCGCTCTTAGCCTTGCGTGC
CCTGCTCCAACACCACGGAGGGGCGGCCAGAAAGGAGGCCGATGTCATTG
CCCGTGCTGTATTCAAGGACGTGCATGTCCCCTCCATGACGCAAACGATT
CGACAACGAGCCTTTGAGGTCCTGTTTGAGATGACGGGTGCGTTGGAGGA
AGAGGAGAAGGAGGACGAGCAGCCGCAGCAGCCGCAGCGGAAAGGCGGGG
ACGAGAGCAGTAGCACTATTCCCACTAGCTTGCTAGGGATGCAAACAGAC
TTCATTCGCGGGCTGATTGATAGCGGGGAAGGCGAGAAGGATCCACGTTG
CCTGATCCTCTTCCTCAAAGTCATCGGCCGTGCCCAGTCGTCCTTTCCCG
AGGCCGCCGACGCCCTCATCGAAGCCGTCTTCGATGTGACCGCCTGCTAC
TTCCCTATCACCTTCACCCCTCCTCCCAACGACCCCTACGGCATCACGCC
CGACATGCTGGCACAAGCCTTGCGAGAAGCCTTGACATCCCGCCCGTCCA
TGGCCCCGCTCCTCCTTCCCCTCCTGGTCGACAAACTCACATCTACCCAC
GTCCCGGCCAAATTGGAAGCGCTCCTCACCCTTCAGACGGCCGTACGGAC
ACTTGGGGTGCATACCATGCGCTTGAATCTCCCTGCGCTTACTGGGGCGT
TATTTCAAGAGGTAGTATCATGTCCCGAGGCAGCAGTAGTGTCCCACGCG
CTGGAAACGTGTCGAGTACTGGCTGCGCATCTGTCAAATCCGGATGATGC
AAACGTCATAGGAAGAGGAAAAAGGCGGGAGAGGACAGGCAGCAGCAGCA
AAAGCAGAAACAAGAAAATCAAAGAAGAAGCAGATGTAGCAGCAGAAAGC
TGCATTGACAGCAACAAAGAAACACAGGAGACAAGGGAAGGTGCGGACCT
CAGTCGACCAGACGAGCGCGCCCTCGCCGAAGCCGATTGGCAAGCTTTTC
TACTCGAGATCGTCCAGAAAGCCGTATCGGAGGTCAAAGCCAACCCAGAC
TCCCTCAAAGGTCGTGCCAGTGCTCGCCTTCTTACCTCTATAGCTCGCGC
CTCCGCCCGTGCTTACTCCGCTGTATTGAAAGCCACCATCCCTATCACCC
TCCAGCTCGTCATGGCTGGCAAGAAATCCAAACCCGGACGAGTCCTTGAA
GAAGAGGAAGGCGAGAAGCATCAAGCCGCTCTCCTCCTTCTCGTCGATTT
GGTGGAGTCCGTGGACCCTTCCCTTGACTTCAGCGCAACAGCCGAAGGCC
CTCCTATCTCCCCCTATGTGCCGCAACTCTATGCAACCCTCCTTGAATGC
CTCAGTTCCCCTGCTTCAGGCCCTGCCTTACTAGCGGTCAAAGGGCTCGC
GTCTCTTGCCACGCGCTCTCCTTCGGACCTCCTTTCTTCTTCGCAAATGT
CCTCCCTCGTCCCTTTGTTCACGGCACGATTGCAAGCTGAGGAACGCTCC
GTGGGCCCTGCTTATGACCCCGACCTGGCCCAGTCATTACTACAGGGGTT
GATGGCACTCAGCTCGCGACGAAAGATGTACACGATAGCTGTCTTGACCC
ATACGTTGCCGGAGTTGTTGACGTGGATGGATGAGGCGGCTGCTGCCGGT
GCTGCAGGGGAGAGAAAAGGAGGAACGGATACGACGACGACGACGACGAC
GACGACGAAATGTAGCATCGCTGCAGTTGCAAACGGTGTAAGAGCCAGTG
CAAGCAGTGGTAACAGCAGCAGCAGCAATGGGCTAGAACTGGAACGATGT
TTGGGTGCGTTGGCGACTTTGGCAGGTCAGGCCGAAGTCTTCCAAGCCGT
CGTTCCCTCCTTGCTCAATCGTGTCTTGGTCTCTCCTCCTACAGGAGGAG
CACCGGTGGGGGTGGAAGGCGAGGGATGGACGAAGGGAGGGCAAGTTATC
TCGAGTGCGTTGAAGGGGGGGGAAGGGGTGACGCAGATTTTGTCCTCTTT
GGCTTCCATTTTTGTATCGACCAGTGAGGCGAACCCTGCAGCCTTGCCTG
CTCTTTTAGCGTTACCACCATCGACCCTGCCTGCTTCATTTATTTCGCCT
TCCTCCGCAGCAACAGGTACAGCCGTGGATGTGGGGAAGGAACCATCTGC
CACTGCGGCTTCCTCTCCTTCCTCCTCTTCCTCCTCCCCTTGCCTCTGGT
CCTTACTAACAGCCCTTCTCTCCTCCGCAGCCCAAGGACGCATTCTGGAC
GACGCTGCTCTAGAAGCAACTCTCCGCATATTTGGCGCAGTCACCGAAGC
TCTTCCCCCCACCCTTCAAGACCTTTTCGCGTTTCGCCTTCTCCGTTTTT
TTTTCCCCTCCTCATCCTCCTTCTTGTCCTCGTCCTCAATCTTTGACGTC
CTCGACCCCTCCCCTCCCCCGGCTCCAGGCCCCAGCATCACTGGCCTCCA
ACCCCTCCTTCCCTCTACCTACCCCTCACAAGCACAAGCCCTCTCTCTTC
TTCTGACCGTTCTCGGTTCTCTTTACATTTCATCCCCCATCTTCGCATCT
TCAGGGATTCAAGACGCCCTTCTTCCTGCCCTCATCCGCCTAACCTTGTC
AGAAGCACAAGAAGCAGACAGCAGGAGCAGCCCCACTGGCAGCTATTCTA
CCAGCGCTCCACTTTCTTCTTCTTCGTGCTTTCCCGACCCGGCCTGTTGG
GGAGTAGCTCTCGTCGTGAATAAAACAGCGAAGGAAGAAGTAGTCGCAGA
GGCAGTCGCCACCCTCCTCTCAGGCTTTAAGCAACGGCTCGCCACTGCGA
CCAGTTGCAGCAACAGTAGCAGCTGCAGCAACAGCAGCAGCAGCAGCAGT
GATAGTATTTTGGCAACAGCGAGAAAGGACGTTGCATCCTTGATCTGGTT
GGCCAAAGCGCTGGCCCTTCGGTGCGCCCCAAAGAAGTCAATGGAAGAGG
CGGTCTCGTCGCTCATCTACGTGGCAGGGTGTCCCGGAGGAACAGGAACA
GGAGAAAGAGAAGTTGAATCAGCGGAAATAGAGCCATCTTCTGCCCGTCT
AGCCTTAGCTCGACAAGCTGCAGAAGGATTTGGTCTCATCCTCCGGGATG
CAGTGCCCTCGTCATCCTCCTCCCTCCCTTCTTCCTCCTCATCCTCACTC
ATCGAGCGCCTGCTCGCCCCGCGTCCGGGCACCTCTCGAGTCAACCCCCT
CTGGCGGCAACGGCTCTACTACCTGGCTTTTCCACGTCTACGGGAAGCTG
TGGATAAACACCGTGCCCGATCACAGGCAAAAGCAGCGGCTTTGCTGGCG
GTGTGTACCCTGGTGGGTTCGTTGCCCCAAGCCGTTATCCAGGCCGAGCT
CGAGCCTATCATGCTCGTGGTCCTGCAGGGAATGTCGTCTGTGTCGAGCA
AAAGCGGCAACAACGACAGCAGCAATGGTTCAGAGGAGGAGGAGGTGGAA
GAGAAGGAAATCGTAGTTGTTCTCAGGGCGCGGGCGACTGAGACATTTGT
TGCGCTGGTCAAGAACTCTCTCGAGGCAGTAGTGCCGCATCTTGCCACTG
CAATTCCTTTGCTTTATCAACTTTGCACCCCTTCTGACCCCCACTTTTTG
CCCAAGGCGAAGCTGCGTGTGTTGGCGCTGGGGAGTTTGATGGAGATAGC
TCGGTTGCCTTATGCCAAATTGCATCCCTACAGGGCGACGGTTAGTAGGG
GGCTGCTTGCCCCATTGGATGATCGGAAGCGGGTGGTGAGGCAGATGGCG
GTGAAGGTAAGGAATGAATGGATGATGATGGATAGATAGGTGAACGTGAA
GAATCAGGAGAAGGCTTAGCGGGTAGGTCAAATGGTCCAAATTTGATAAG
GAGGCTAGCTCTTGAAGATAGACAGAAAATAGTTTTGATAAATCACCAAA
AACAACAAGTAACAAATTTCGGTCGCCCATA

protein sequence of jgi.p|Nanoce1779_2|578449

>mRNA_1932-protein ID=mRNA_1932-protein|Name=jgi.p|Nanoce1779_2|578449|organism=Nannochloropsis oceanica|type=polypeptide|length=1407bp
MTTLALSSLASGISGSGDGASNTLSSSPFSTSSQALSQALAAYCAAVDPT
AGTAGEGTKPPPPSSFLPKSSQDASIPHLNTVLLHVQRSKRFDELVGQMG
PYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFP
SVAGSLLALRALLQHHGGAARKEADVIARAVFKDVHVPSMTQTIRQRAFE
VLFEMTGALEEEEKEDEQPQQPQRKGGDESSSTIPTSLLGMQTDFIRGLI
DSGEGEKDPRCLILFLKVIGRAQSSFPEAADALIEAVFDVTACYFPITFT
PPPNDPYGITPDMLAQALREALTSRPSMAPLLLPLLVDKLTSTHVPAKLE
ALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRV
LAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNK
ETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKANPDSLKGRA
SARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEK
HQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSSPAS
GPALLAVKGLASLATRSPSDLLSSSQMSSLVPLFTARLQAEERSVGPAYD
PDLAQSLLQGLMALSSRRKMYTIAVLTHTLPELLTWMDEAAAAGAAGERK
GGTDTTTTTTTTTKCSIAAVANGVRASASSGNSSSSNGLELERCLGALAT
LAGQAEVFQAVVPSLLNRVLVSPPTGGAPVGVEGEGWTKGGQVISSALKG
GEGVTQILSSLASIFVSTSEANPAALPALLALPPSTLPASFISPSSAATG
TAVDVGKEPSATAASSPSSSSSSPCLWSLLTALLSSAAQGRILDDAALEA
TLRIFGAVTEALPPTLQDLFAFRLLRFFFPSSSSFLSSSSIFDVLDPSPP
PAPGPSITGLQPLLPSTYPSQAQALSLLLTVLGSLYISSPIFASSGIQDA
LLPALIRLTLSEAQEADSRSSPTGSYSTSAPLSSSSCFPDPACWGVALVV
NKTAKEEVVAEAVATLLSGFKQRLATATSCSNSSSCSNSSSSSSDSILAT
ARKDVASLIWLAKALALRCAPKKSMEEAVSSLIYVAGCPGGTGTGEREVE
SAEIEPSSARLALARQAAEGFGLILRDAVPSSSSSLPSSSSSSLIERLLA
PRPGTSRVNPLWRQRLYYLAFPRLREAVDKHRARSQAKAAALLAVCTLVG
SLPQAVIQAELEPIMLVVLQGMSSVSSKSGNNDSSNGSEEEEVEEKEIVV
VLRARATETFVALVKNSLEAVVPHLATAIPLLYQLCTPSDPHFLPKAKLR
VLALGSLMEIARLPYAKLHPYRATVSRGLLAPLDDRKRVVRQMAVKVRNE
WMMMDR*

mRNA from alignment at scaffold_4:381624..386004+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1932 ID=mRNA_1932|Name=jgi.p|Nanoce1779_2|578449|organism=Nannochloropsis oceanica|type=mRNA|length=4381bp|location=Sequence derived from alignment at scaffold_4:381624..386004+ (Nannochloropsis oceanica)
AATAGAAGAACCTACGTCATGACTACATTGGCACTGAGTAGCTTGGCATC
GGGAATTTCAGGGAGTGGGGATGGAGCTAGCAATACCCTATCCTCGTCTC
CCTTCTCGACCTCCTCTCAAGCGCTGTCGCAAGCCCTCGCTGCATACTGC
GCGGCCGTCGACCCTACTGCAGGGACCGCTGGGGAAGGGACGAAGCCCCC
ACCACCTTCCTCCTTTTTACCCAAGTCTTCTCAAGACGCCTCCATTCCGC
ACCTTAACACGGTACTCCTGCATGTACAACGTAGCAAGCGCTTCGACGAA
TTGGTGGGGCAAATGGGGCCTTACCTCACGAGCGAGGAAGGACGAGTTCG
AACCCGCGCCGCTGCGTTGTTGGGTGAAATCTTGAACCGCCTTCCAAAGC
TACCTCTCACCTGCGCGGCTGTCCACCACTTTGTGGATTTCTTTTCGAGT
CGCCTCTCCGATTTCCCCTCTGTAGCCGGCTCGCTCTTAGCCTTGCGTGC
CCTGCTCCAACACCACGGAGGGGCGGCCAGAAAGGAGGCCGATGTCATTG
CCCGTGCTGTATTCAAGGACGTGCATGTCCCCTCCATGACGCAAACGATT
CGACAACGAGCCTTTGAGGTCCTGTTTGAGATGACGGGTGCGTTGGAGGA
AGAGGAGAAGGAGGACGAGCAGCCGCAGCAGCCGCAGCGGAAAGGCGGGG
ACGAGAGCAGTAGCACTATTCCCACTAGCTTGCTAGGGATGCAAACAGAC
TTCATTCGCGGGCTGATTGATAGCGGGGAAGGCGAGAAGGATCCACGTTG
CCTGATCCTCTTCCTCAAAGTCATCGGCCGTGCCCAGTCGTCCTTTCCCG
AGGCCGCCGACGCCCTCATCGAAGCCGTCTTCGATGTGACCGCCTGCTAC
TTCCCTATCACCTTCACCCCTCCTCCCAACGACCCCTACGGCATCACGCC
CGACATGCTGGCACAAGCCTTGCGAGAAGCCTTGACATCCCGCCCGTCCA
TGGCCCCGCTCCTCCTTCCCCTCCTGGTCGACAAACTCACATCTACCCAC
GTCCCGGCCAAATTGGAAGCGCTCCTCACCCTTCAGACGGCCGTACGGAC
ACTTGGGGTGCATACCATGCGCTTGAATCTCCCTGCGCTTACTGGGGCGT
TATTTCAAGAGGTAGTATCATGTCCCGAGGCAGCAGTAGTGTCCCACGCG
CTGGAAACGTGTCGAGTACTGGCTGCGCATCTGTCAAATCCGGATGATGC
AAACGTCATAGGAAGAGGAAAAAGGCGGGAGAGGACAGGCAGCAGCAGCA
AAAGCAGAAACAAGAAAATCAAAGAAGAAGCAGATGTAGCAGCAGAAAGC
TGCATTGACAGCAACAAAGAAACACAGGAGACAAGGGAAGGTGCGGACCT
CAGTCGACCAGACGAGCGCGCCCTCGCCGAAGCCGATTGGCAAGCTTTTC
TACTCGAGATCGTCCAGAAAGCCGTATCGGAGGTCAAAGCCAACCCAGAC
TCCCTCAAAGGTCGTGCCAGTGCTCGCCTTCTTACCTCTATAGCTCGCGC
CTCCGCCCGTGCTTACTCCGCTGTATTGAAAGCCACCATCCCTATCACCC
TCCAGCTCGTCATGGCTGGCAAGAAATCCAAACCCGGACGAGTCCTTGAA
GAAGAGGAAGGCGAGAAGCATCAAGCCGCTCTCCTCCTTCTCGTCGATTT
GGTGGAGTCCGTGGACCCTTCCCTTGACTTCAGCGCAACAGCCGAAGGCC
CTCCTATCTCCCCCTATGTGCCGCAACTCTATGCAACCCTCCTTGAATGC
CTCAGTTCCCCTGCTTCAGGCCCTGCCTTACTAGCGGTCAAAGGGCTCGC
GTCTCTTGCCACGCGCTCTCCTTCGGACCTCCTTTCTTCTTCGCAAATGT
CCTCCCTCGTCCCTTTGTTCACGGCACGATTGCAAGCTGAGGAACGCTCC
GTGGGCCCTGCTTATGACCCCGACCTGGCCCAGTCATTACTACAGGGGTT
GATGGCACTCAGCTCGCGACGAAAGATGTACACGATAGCTGTCTTGACCC
ATACGTTGCCGGAGTTGTTGACGTGGATGGATGAGGCGGCTGCTGCCGGT
GCTGCAGGGGAGAGAAAAGGAGGAACGGATACGACGACGACGACGACGAC
GACGACGAAATGTAGCATCGCTGCAGTTGCAAACGGTGTAAGAGCCAGTG
CAAGCAGTGGTAACAGCAGCAGCAGCAATGGGCTAGAACTGGAACGATGT
TTGGGTGCGTTGGCGACTTTGGCAGGTCAGGCCGAAGTCTTCCAAGCCGT
CGTTCCCTCCTTGCTCAATCGTGTCTTGGTCTCTCCTCCTACAGGAGGAG
CACCGGTGGGGGTGGAAGGCGAGGGATGGACGAAGGGAGGGCAAGTTATC
TCGAGTGCGTTGAAGGGGGGGGAAGGGGTGACGCAGATTTTGTCCTCTTT
GGCTTCCATTTTTGTATCGACCAGTGAGGCGAACCCTGCAGCCTTGCCTG
CTCTTTTAGCGTTACCACCATCGACCCTGCCTGCTTCATTTATTTCGCCT
TCCTCCGCAGCAACAGGTACAGCCGTGGATGTGGGGAAGGAACCATCTGC
CACTGCGGCTTCCTCTCCTTCCTCCTCTTCCTCCTCCCCTTGCCTCTGGT
CCTTACTAACAGCCCTTCTCTCCTCCGCAGCCCAAGGACGCATTCTGGAC
GACGCTGCTCTAGAAGCAACTCTCCGCATATTTGGCGCAGTCACCGAAGC
TCTTCCCCCCACCCTTCAAGACCTTTTCGCGTTTCGCCTTCTCCGTTTTT
TTTTCCCCTCCTCATCCTCCTTCTTGTCCTCGTCCTCAATCTTTGACGTC
CTCGACCCCTCCCCTCCCCCGGCTCCAGGCCCCAGCATCACTGGCCTCCA
ACCCCTCCTTCCCTCTACCTACCCCTCACAAGCACAAGCCCTCTCTCTTC
TTCTGACCGTTCTCGGTTCTCTTTACATTTCATCCCCCATCTTCGCATCT
TCAGGGATTCAAGACGCCCTTCTTCCTGCCCTCATCCGCCTAACCTTGTC
AGAAGCACAAGAAGCAGACAGCAGGAGCAGCCCCACTGGCAGCTATTCTA
CCAGCGCTCCACTTTCTTCTTCTTCGTGCTTTCCCGACCCGGCCTGTTGG
GGAGTAGCTCTCGTCGTGAATAAAACAGCGAAGGAAGAAGTAGTCGCAGA
GGCAGTCGCCACCCTCCTCTCAGGCTTTAAGCAACGGCTCGCCACTGCGA
CCAGTTGCAGCAACAGTAGCAGCTGCAGCAACAGCAGCAGCAGCAGCAGT
GATAGTATTTTGGCAACAGCGAGAAAGGACGTTGCATCCTTGATCTGGTT
GGCCAAAGCGCTGGCCCTTCGGTGCGCCCCAAAGAAGTCAATGGAAGAGG
CGGTCTCGTCGCTCATCTACGTGGCAGGGTGTCCCGGAGGAACAGGAACA
GGAGAAAGAGAAGTTGAATCAGCGGAAATAGAGCCATCTTCTGCCCGTCT
AGCCTTAGCTCGACAAGCTGCAGAAGGATTTGGTCTCATCCTCCGGGATG
CAGTGCCCTCGTCATCCTCCTCCCTCCCTTCTTCCTCCTCATCCTCACTC
ATCGAGCGCCTGCTCGCCCCGCGTCCGGGCACCTCTCGAGTCAACCCCCT
CTGGCGGCAACGGCTCTACTACCTGGCTTTTCCACGTCTACGGGAAGCTG
TGGATAAACACCGTGCCCGATCACAGGCAAAAGCAGCGGCTTTGCTGGCG
GTGTGTACCCTGGTGGGTTCGTTGCCCCAAGCCGTTATCCAGGCCGAGCT
CGAGCCTATCATGCTCGTGGTCCTGCAGGGAATGTCGTCTGTGTCGAGCA
AAAGCGGCAACAACGACAGCAGCAATGGTTCAGAGGAGGAGGAGGTGGAA
GAGAAGGAAATCGTAGTTGTTCTCAGGGCGCGGGCGACTGAGACATTTGT
TGCGCTGGTCAAGAACTCTCTCGAGGCAGTAGTGCCGCATCTTGCCACTG
CAATTCCTTTGCTTTATCAACTTTGCACCCCTTCTGACCCCCACTTTTTG
CCCAAGGCGAAGCTGCGTGTGTTGGCGCTGGGGAGTTTGATGGAGATAGC
TCGGTTGCCTTATGCCAAATTGCATCCCTACAGGGCGACGGTTAGTAGGG
GGCTGCTTGCCCCATTGGATGATCGGAAGCGGGTGGTGAGGCAGATGGCG
GTGAAGGTAAGGAATGAATGGATGATGATGGATAGATAGGTGAACGTGAA
GAATCAGGAGAAGGCTTAGCGGGTAGGTCAAATGGTCCAAATTTGATAAG
GAGGCTAGCTCTTGAAGATAGACAGAAAATAGTTTTGATAAATCACCAAA
AACAACAAGTAACAAATTTCGGTCGCCCATA

Coding sequence (CDS) from alignment at scaffold_4:381624..386004+

>mRNA_1932 ID=mRNA_1932|Name=jgi.p|Nanoce1779_2|578449|organism=Nannochloropsis oceanica|type=CDS|length=4221bp|location=Sequence derived from alignment at scaffold_4:381624..386004+ (Nannochloropsis oceanica)
ATGACTACATTGGCACTGAGTAGCTTGGCATCGGGAATTTCAGGGAGTGG
GGATGGAGCTAGCAATACCCTATCCTCGTCTCCCTTCTCGACCTCCTCTC
AAGCGCTGTCGCAAGCCCTCGCTGCATACTGCGCGGCCGTCGACCCTACT
GCAGGGACCGCTGGGGAAGGGACGAAGCCCCCACCACCTTCCTCCTTTTT
ACCCAAGTCTTCTCAAGACGCCTCCATTCCGCACCTTAACACGGTACTCC
TGCATGTACAACGTAGCAAGCGCTTCGACGAATTGGTGGGGCAAATGGGG
CCTTACCTCACGAGCGAGGAAGGACGAGTTCGAACCCGCGCCGCTGCGTT
GTTGGGTGAAATCTTGAACCGCCTTCCAAAGCTACCTCTCACCTGCGCGG
CTGTCCACCACTTTGTGGATTTCTTTTCGAGTCGCCTCTCCGATTTCCCC
TCTGTAGCCGGCTCGCTCTTAGCCTTGCGTGCCCTGCTCCAACACCACGG
AGGGGCGGCCAGAAAGGAGGCCGATGTCATTGCCCGTGCTGTATTCAAGG
ACGTGCATGTCCCCTCCATGACGCAAACGATTCGACAACGAGCCTTTGAG
GTCCTGTTTGAGATGACGGGTGCGTTGGAGGAAGAGGAGAAGGAGGACGA
GCAGCCGCAGCAGCCGCAGCGGAAAGGCGGGGACGAGAGCAGTAGCACTA
TTCCCACTAGCTTGCTAGGGATGCAAACAGACTTCATTCGCGGGCTGATT
GATAGCGGGGAAGGCGAGAAGGATCCACGTTGCCTGATCCTCTTCCTCAA
AGTCATCGGCCGTGCCCAGTCGTCCTTTCCCGAGGCCGCCGACGCCCTCA
TCGAAGCCGTCTTCGATGTGACCGCCTGCTACTTCCCTATCACCTTCACC
CCTCCTCCCAACGACCCCTACGGCATCACGCCCGACATGCTGGCACAAGC
CTTGCGAGAAGCCTTGACATCCCGCCCGTCCATGGCCCCGCTCCTCCTTC
CCCTCCTGGTCGACAAACTCACATCTACCCACGTCCCGGCCAAATTGGAA
GCGCTCCTCACCCTTCAGACGGCCGTACGGACACTTGGGGTGCATACCAT
GCGCTTGAATCTCCCTGCGCTTACTGGGGCGTTATTTCAAGAGGTAGTAT
CATGTCCCGAGGCAGCAGTAGTGTCCCACGCGCTGGAAACGTGTCGAGTA
CTGGCTGCGCATCTGTCAAATCCGGATGATGCAAACGTCATAGGAAGAGG
AAAAAGGCGGGAGAGGACAGGCAGCAGCAGCAAAAGCAGAAACAAGAAAA
TCAAAGAAGAAGCAGATGTAGCAGCAGAAAGCTGCATTGACAGCAACAAA
GAAACACAGGAGACAAGGGAAGGTGCGGACCTCAGTCGACCAGACGAGCG
CGCCCTCGCCGAAGCCGATTGGCAAGCTTTTCTACTCGAGATCGTCCAGA
AAGCCGTATCGGAGGTCAAAGCCAACCCAGACTCCCTCAAAGGTCGTGCC
AGTGCTCGCCTTCTTACCTCTATAGCTCGCGCCTCCGCCCGTGCTTACTC
CGCTGTATTGAAAGCCACCATCCCTATCACCCTCCAGCTCGTCATGGCTG
GCAAGAAATCCAAACCCGGACGAGTCCTTGAAGAAGAGGAAGGCGAGAAG
CATCAAGCCGCTCTCCTCCTTCTCGTCGATTTGGTGGAGTCCGTGGACCC
TTCCCTTGACTTCAGCGCAACAGCCGAAGGCCCTCCTATCTCCCCCTATG
TGCCGCAACTCTATGCAACCCTCCTTGAATGCCTCAGTTCCCCTGCTTCA
GGCCCTGCCTTACTAGCGGTCAAAGGGCTCGCGTCTCTTGCCACGCGCTC
TCCTTCGGACCTCCTTTCTTCTTCGCAAATGTCCTCCCTCGTCCCTTTGT
TCACGGCACGATTGCAAGCTGAGGAACGCTCCGTGGGCCCTGCTTATGAC
CCCGACCTGGCCCAGTCATTACTACAGGGGTTGATGGCACTCAGCTCGCG
ACGAAAGATGTACACGATAGCTGTCTTGACCCATACGTTGCCGGAGTTGT
TGACGTGGATGGATGAGGCGGCTGCTGCCGGTGCTGCAGGGGAGAGAAAA
GGAGGAACGGATACGACGACGACGACGACGACGACGACGAAATGTAGCAT
CGCTGCAGTTGCAAACGGTGTAAGAGCCAGTGCAAGCAGTGGTAACAGCA
GCAGCAGCAATGGGCTAGAACTGGAACGATGTTTGGGTGCGTTGGCGACT
TTGGCAGGTCAGGCCGAAGTCTTCCAAGCCGTCGTTCCCTCCTTGCTCAA
TCGTGTCTTGGTCTCTCCTCCTACAGGAGGAGCACCGGTGGGGGTGGAAG
GCGAGGGATGGACGAAGGGAGGGCAAGTTATCTCGAGTGCGTTGAAGGGG
GGGGAAGGGGTGACGCAGATTTTGTCCTCTTTGGCTTCCATTTTTGTATC
GACCAGTGAGGCGAACCCTGCAGCCTTGCCTGCTCTTTTAGCGTTACCAC
CATCGACCCTGCCTGCTTCATTTATTTCGCCTTCCTCCGCAGCAACAGGT
ACAGCCGTGGATGTGGGGAAGGAACCATCTGCCACTGCGGCTTCCTCTCC
TTCCTCCTCTTCCTCCTCCCCTTGCCTCTGGTCCTTACTAACAGCCCTTC
TCTCCTCCGCAGCCCAAGGACGCATTCTGGACGACGCTGCTCTAGAAGCA
ACTCTCCGCATATTTGGCGCAGTCACCGAAGCTCTTCCCCCCACCCTTCA
AGACCTTTTCGCGTTTCGCCTTCTCCGTTTTTTTTTCCCCTCCTCATCCT
CCTTCTTGTCCTCGTCCTCAATCTTTGACGTCCTCGACCCCTCCCCTCCC
CCGGCTCCAGGCCCCAGCATCACTGGCCTCCAACCCCTCCTTCCCTCTAC
CTACCCCTCACAAGCACAAGCCCTCTCTCTTCTTCTGACCGTTCTCGGTT
CTCTTTACATTTCATCCCCCATCTTCGCATCTTCAGGGATTCAAGACGCC
CTTCTTCCTGCCCTCATCCGCCTAACCTTGTCAGAAGCACAAGAAGCAGA
CAGCAGGAGCAGCCCCACTGGCAGCTATTCTACCAGCGCTCCACTTTCTT
CTTCTTCGTGCTTTCCCGACCCGGCCTGTTGGGGAGTAGCTCTCGTCGTG
AATAAAACAGCGAAGGAAGAAGTAGTCGCAGAGGCAGTCGCCACCCTCCT
CTCAGGCTTTAAGCAACGGCTCGCCACTGCGACCAGTTGCAGCAACAGTA
GCAGCTGCAGCAACAGCAGCAGCAGCAGCAGTGATAGTATTTTGGCAACA
GCGAGAAAGGACGTTGCATCCTTGATCTGGTTGGCCAAAGCGCTGGCCCT
TCGGTGCGCCCCAAAGAAGTCAATGGAAGAGGCGGTCTCGTCGCTCATCT
ACGTGGCAGGGTGTCCCGGAGGAACAGGAACAGGAGAAAGAGAAGTTGAA
TCAGCGGAAATAGAGCCATCTTCTGCCCGTCTAGCCTTAGCTCGACAAGC
TGCAGAAGGATTTGGTCTCATCCTCCGGGATGCAGTGCCCTCGTCATCCT
CCTCCCTCCCTTCTTCCTCCTCATCCTCACTCATCGAGCGCCTGCTCGCC
CCGCGTCCGGGCACCTCTCGAGTCAACCCCCTCTGGCGGCAACGGCTCTA
CTACCTGGCTTTTCCACGTCTACGGGAAGCTGTGGATAAACACCGTGCCC
GATCACAGGCAAAAGCAGCGGCTTTGCTGGCGGTGTGTACCCTGGTGGGT
TCGTTGCCCCAAGCCGTTATCCAGGCCGAGCTCGAGCCTATCATGCTCGT
GGTCCTGCAGGGAATGTCGTCTGTGTCGAGCAAAAGCGGCAACAACGACA
GCAGCAATGGTTCAGAGGAGGAGGAGGTGGAAGAGAAGGAAATCGTAGTT
GTTCTCAGGGCGCGGGCGACTGAGACATTTGTTGCGCTGGTCAAGAACTC
TCTCGAGGCAGTAGTGCCGCATCTTGCCACTGCAATTCCTTTGCTTTATC
AACTTTGCACCCCTTCTGACCCCCACTTTTTGCCCAAGGCGAAGCTGCGT
GTGTTGGCGCTGGGGAGTTTGATGGAGATAGCTCGGTTGCCTTATGCCAA
ATTGCATCCCTACAGGGCGACGGTTAGTAGGGGGCTGCTTGCCCCATTGG
ATGATCGGAAGCGGGTGGTGAGGCAGATGGCGGTGAAGGTAAGGAATGAA
TGGATGATGATGGATAGATAG

Synonyms

Publications