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Properties
| Property Name | Value |
|---|
| TranscriptId | 578435 |
| Track | FilteredModels2 |
| ProteinId | 578349 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:300397..301633 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1898 ID=mRNA_1898|Name=jgi.p|Nanoce1779_2|578349|organism=Nannochloropsis oceanica|type=mRNA|length=1078bp
ACAGGGATACACACCGAAAGCAAACCGTGGAAGATGCGCCGTTGCTGCAC
TTCCTTCCTGGCCGCGTCCGCCGCTATGCTCCTCGCTGTAAGTGCCGTGG
AGACTTTGCCCGAGATGAGGCACGACGATCTCGAGAGAGACACACCCAGC
TGGCCCGGCCCGATTGCGCCCGTGACGGAGTTGGATGTTGAAGCCTACAC
GGGGCGATGGTTTCAGTTGTACGCCAATCTTCTCGTCAAGTATACCTTTG
AACTGGGCGGCGTCTGCGTCACGGCCGATTATGGCCTCCTCGCCAACGGC
ACAGGTGTGTCAGTCCACAACGCCCAAAACTTCCTGCAGCCCAACGGCAC
CACGACCATCATCAACGGGCAAGCCACCGCAATGAATGCCTCTGAGCCCG
GCAAGTTGACCGTGACCTTTGATCCCATCCCTTTCCCTGGTAGCTACTGG
ATCGTGAAGTTAGGTCCGGTGGAAGACGGAGAGTATCAATACAGTGTGGT
GACAGACGCGTATGCAATCACCCTCTTCATCCTGGCGCGGGACCCCGCGA
CTTTCAAGGAGAGGTATGAGAAGGAAGTCTTGGAATTTGTCAACCCGTTG
TTCGCGGGTTTTTTGCGCAAGCCTCGCCCGACCGTGCAGGGGCCGGACTG
TCTGTACTCGCCTGTGCCTTCCGTTTTTGCGAGTGGAAGCGAGAGTGAGA
ACGTGAGTGTGTATGTGGAACGAAAAGGGGGAGTGGAGAGTATGGTGGAC
GAGAGTATGAGCCTCAGAGGCCATGACGCCATGGCGGAGGATGTGGCGCG
CTTGCATGGGGCGTTGCGCGCAGGGGGACCGAAGTAAAGAGAAGGAGGAG
TAGGAGGAGAGGGATGATAGTAAGACAGAATGGAATTGAAGCAGGAACGG
GCAGCATTGGGGTACAAAAGGAACCATCCAAGAAGCTTGCAGTGCATACA
CAAGAGACCGACGCATTGCATCTGGAATATTCAGTGCGGGAGATTTTGAA
GGGGAAAGAAGGCAAACGGATGTCTCGGCACGGGCATGGGCCAGGGGGTA
CGGATATGGGCCAGGGGGTACGGATATG back to topprotein sequence of jgi.p|Nanoce1779_2|578349 >mRNA_1898-protein ID=mRNA_1898-protein|Name=jgi.p|Nanoce1779_2|578349|organism=Nannochloropsis oceanica|type=polypeptide|length=268bp
MRRCCTSFLAASAAMLLAVSAVETLPEMRHDDLERDTPSWPGPIAPVTEL
DVEAYTGRWFQLYANLLVKYTFELGGVCVTADYGLLANGTGVSVHNAQNF
LQPNGTTTIINGQATAMNASEPGKLTVTFDPIPFPGSYWIVKLGPVEDGE
YQYSVVTDAYAITLFILARDPATFKERYEKEVLEFVNPLFAGFLRKPRPT
VQGPDCLYSPVPSVFASGSESENVSVYVERKGGVESMVDESMSLRGHDAM
AEDVARLHGALRAGGPK* back to topmRNA from alignment at scaffold_4:300397..301633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1898 ID=mRNA_1898|Name=jgi.p|Nanoce1779_2|578349|organism=Nannochloropsis oceanica|type=mRNA|length=1237bp|location=Sequence derived from alignment at scaffold_4:300397..301633- (Nannochloropsis oceanica)
ACAGGGATACACACCGAAAGCAAACCGTGGAAGATGCGCCGTTGCTGCAC
TTCCTTCCTGGCCGCGTCCGCCGCTATGCTCCTCGCTGTAAGTGCCGTGG
AGACTTTGCCCGAGATGAGGCACGACGATCTCGAGAGAGACACACCCAGC
TGGCCCGGCCCGATTGCGCCCGTGACGGAGTTGGATGTTGAAGCCTACAC
GGGGCGATGGTTTCAGGTAAATGGCAGAATAAAATCTCTAGTGTTGGGAA
AGGGGACGTGGTGGAATTCGAAACGATCAAGTATTTATTTTCCTCTCCTT
GCCCTTTCAACTTGACTCATGCTCGCTCCACTCGGAACCACCTCCTCCAT
CTTTCTTTTGTCTCAACCCTTTAAGTTGTACGCCAATCTTCTCGTCAAGT
ATACCTTTGAACTGGGCGGCGTCTGCGTCACGGCCGATTATGGCCTCCTC
GCCAACGGCACAGGTGTGTCAGTCCACAACGCCCAAAACTTCCTGCAGCC
CAACGGCACCACGACCATCATCAACGGGCAAGCCACCGCAATGAATGCCT
CTGAGCCCGGCAAGTTGACCGTGACCTTTGATCCCATCCCTTTCCCTGGT
AGCTACTGGATCGTGAAGTTAGGTCCGGTGGAAGACGGAGAGTATCAATA
CAGTGTGGTGACAGACGCGTATGCAATCACCCTCTTCATCCTGGCGCGGG
ACCCCGCGACTTTCAAGGAGAGGTATGAGAAGGAAGTCTTGGAATTTGTC
AACCCGTTGTTCGCGGGTTTTTTGCGCAAGCCTCGCCCGACCGTGCAGGG
GCCGGACTGTCTGTACTCGCCTGTGCCTTCCGTTTTTGCGAGTGGAAGCG
AGAGTGAGAACGTGAGTGTGTATGTGGAACGAAAAGGGGGAGTGGAGAGT
ATGGTGGACGAGAGTATGAGCCTCAGAGGCCATGACGCCATGGCGGAGGA
TGTGGCGCGCTTGCATGGGGCGTTGCGCGCAGGGGGACCGAAGTAAAGAG
AAGGAGGAGTAGGAGGAGAGGGATGATAGTAAGACAGAATGGAATTGAAG
CAGGAACGGGCAGCATTGGGGTACAAAAGGAACCATCCAAGAAGCTTGCA
GTGCATACACAAGAGACCGACGCATTGCATCTGGAATATTCAGTGCGGGA
GATTTTGAAGGGGAAAGAAGGCAAACGGATGTCTCGGCACGGGCATGGGC
CAGGGGGTACGGATATGGGCCAGGGGGTACGGATATG back to topCoding sequence (CDS) from alignment at scaffold_4:300397..301633- >mRNA_1898 ID=mRNA_1898|Name=jgi.p|Nanoce1779_2|578349|organism=Nannochloropsis oceanica|type=CDS|length=1608bp|location=Sequence derived from alignment at scaffold_4:300397..301633- (Nannochloropsis oceanica)
TTGTACGCCAATCTTCTCGTCAAGTATACCTTTGAACTGGGCGGCGTCTG
CGTCACGGCCGATTATGGCCTCCTCGCCAACGGCACAGGTGTGTCAGTCC
ACAACGCCCAAAACTTCCTGCAGCCCAACGGCACCACGACCATCATCAAC
GGGCAAGCCACCGCAATGAATGCCTCTGAGCCCGGCAAGTTGACCGTGAC
CTTTGATCCCATCCCTTTCCCTGGTAGCTACTGGATCGTGAAGTTAGGTC
CGGTGGAAGACGGAGAGTATCAATACAGTGTGGTGACAGACGCGTATGCA
ATCACCCTCTTCATCCTGGCGCGGGACCCCGCGACTTTCAAGGAGAGGTA
TGAGAAGGAAGTCTTGGAATTTGTCAACCCGTTGTTCGCGGGTTTTTTGC
GCAAGCCTCGCCCGACCGTGCAGGGGCCGGACTGTCTGTACTCGCCTGTG
CCTTCCGTTTTTGCGAGTGGAAGCGAGAGTGAGAACGTGAGTGTGTATGT
GGAACGAAAAGGGGGAGTGGAGAGTATGGTGGACGAGAGTATGAGCCTCA
GAGGCCATGACGCCATGGCGGAGGATGTGGCGCGCTTGCATGGGGCGTTG
CGCGCAGGGGGACCGAAGTAAATGCGCCGTTGCTGCACTTCCTTCCTGGC
CGCGTCCGCCGCTATGCTCCTCGCTGTAAGTGCCGTGGAGACTTTGCCCG
AGATGAGGCACGACGATCTCGAGAGAGACACACCCAGCTGGCCCGGCCCG
ATTGCGCCCGTGACGGAGTTGGATGTTGAAGCCTACACGGGGCGATGGTT
TCAGTTGTACGCCAATCTTCTCGTCAAGTATACCTTTGAACTGGGCGGCG
TCTGCGTCACGGCCGATTATGGCCTCCTCGCCAACGGCACAGGTGTGTCA
GTCCACAACGCCCAAAACTTCCTGCAGCCCAACGGCACCACGACCATCAT
CAACGGGCAAGCCACCGCAATGAATGCCTCTGAGCCCGGCAAGTTGACCG
TGACCTTTGATCCCATCCCTTTCCCTGGTAGCTACTGGATCGTGAAGTTA
GGTCCGGTGGAAGACGGAGAGTATCAATACAGTGTGGTGACAGACGCGTA
TGCAATCACCCTCTTCATCCTGGCGCGGGACCCCGCGACTTTCAAGGAGA
GGTATGAGAAGGAAGTCTTGGAATTTGTCAACCCGTTGTTCGCGGGTTTT
TTGCGCAAGCCTCGCCCGACCGTGCAGGGGCCGGACTGTCTGTACTCGCC
TGTGCCTTCCGTTTTTGCGAGTGGAAGCGAGAGTGAGAACGTGAGTGTGT
ATGTGGAACGAAAAGGGGGAGTGGAGAGTATGGTGGACGAGAGTATGAGC
CTCAGAGGCCATGACGCCATGGCGGAGGATGTGGCGCGCTTGCATGGGGC
GTTGCGCGCAGGGGGACCGAAGTAAATGCGCCGTTGCTGCACTTCCTTCC
TGGCCGCGTCCGCCGCTATGCTCCTCGCTGTAAGTGCCGTGGAGACTTTG
CCCGAGATGAGGCACGACGATCTCGAGAGAGACACACCCAGCTGGCCCGG
CCCGATTGCGCCCGTGACGGAGTTGGATGTTGAAGCCTACACGGGGCGAT
GGTTTCAG back to top
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