jgi.p|Nanoce1779_2|668636, mRNA_1855 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|668636
Unique Name	mRNA_1855
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4357
Alignment location	scaffold_4:189195..193551 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	668722
Track	FilteredModels2
ProteinId	668636

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_4	supercontig	scaffold_4:189195..193551 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|668636	gene_1855	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|668636	mRNA_1855-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1855	CDS_1855	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_4:189195..193551+
coding sequence from alignment at scaffold_4:189195..193551+

mRNA sequence

>mRNA_1855 ID=mRNA_1855|Name=jgi.p|Nanoce1779_2|668636|organism=Nannochloropsis oceanica|type=mRNA|length=4357bp
AACAGGGAGGCCAGAGCCACGGCATCTGTATCCAGCAAAAATTCAGCGCC
CTGCCTGTCCGGTGGTCATGGTCTCCCAACCCTCCCTTCCCGCCACCCTT
GGACCTGAGCATGTCTCGCCGTTGTATTCAACTCTCCTTGCCGCCCTCGA
CACCACCGACCCTGCCGGTCGTCATCAAGCGGAAGAAGTTCTGCGCGCCT
TTGAGACTGTACCCAATTTTTTGGATGTCCTGGCGGTTATCATTCAAGGT
TCTGAAGCCGACGTGGATAACAACGCGCGCTTGCTCGCAGTACTGCTCAT
GCAAAATGTTGTTCGACGACATTGGCGGAACGCCGGCAGCAGCGCTGACG
GGGAGGATGGACTAAGATTAGGAAAGTTCGGGGGCGAAAGGATTGGAGAA
CTCATGCGACGGCGCGAGGGTGGGGGTATGGCGACAGGAGCGAGCTGTGA
TAGCCCGCATGCAATGTACCTACAGCAGCAGCAGCGACAAACACGACCTG
TGAGCGAGGAAGAAAAGGCGCGCTTCCGTGCTTTTTTGCTGTCCCGCATG
ACAGAACCACATGACTTGCTCGCGAAAAATACGGCGCACGTCCTTGCGAA
AGTGGTTCGTGCCGACTGGCCACGGAAATGGCCTGACTTCTTCCCGCAGC
TCCTTGCTTTCCTTCCACCCAGCTCTCCCCCGAGCAACAGCGCTGGGCAG
GACTACCATCAAGAGGATGACCTTCAAACTATCCGTGTCATTCATGCATT
ACATCGCGTTACCAAGGAACTTGCAGGTAAGGGTCTTTTAGCAGACAAGA
TGGCGTTTCAAGGAATGGCTCGCCTCCTGTTCCCAATTGTATACCAGCAC
CTCTGGCGTTCACGACTCGATAGCCTCCTACGTGCCCTCGAGAGGGAAGG
AGGTACGGAGAACCTGATAGGCTTGGCGCAGATTGTCAAAACGTGCACCA
AGATCTTGTACTTCCTCTCAGTACAGCACGCCGATGCCCTGGACCCCGAT
GCCCTGCTCGCCTTCTTTCACGACGCCCACGGAGCACTGCGCCTCCTCCT
GACCTTCGAGAAGGAGCTCATTGCTGCTTCCCTCTCCTCCTTCTCTGTTT
TACCCCCTGTCCTCCATCAACTGGCCAAAGTCACCAAGAATCTGAGTGCA
TTAATTGTCGAGACGCAAAGTCGCTCTCCCCTTGTACTGCGCGGTGGGGC
GCTTCCCCTCTTCCTCCACTTCTTTTATGACGAGATCTGCAGTATCACTG
GCGTCTCTTCCTCCACCTCTTCCTCCTCCTTCTGCTCATCATCCTTCGCT
TTCTCCACCTTGTCTTCACCTGCCCCTGCAGCGGTCATGGAAGCCATGCT
TTGGGACCCCGATCCCGCTGATCCCTGCAGAAAATTCTACCTTAACGCGT
GTGCCTTTCTAGGGAACTGCCTCACTTGTCCTGACTACCAACATTCGGAG
CATGCCTCTCACAATCCTTCCTTCCCTCCCTCTTCCTCCACCAGTCCCTC
CAATGGCCAGAACTGTGGCACGAGTAGTAAAAGGGGGTCGCCGCGTTCGA
TTTCGTTCGCCGCGGACGGAGAGAGGCCCCCATGTCAAAGGGAGATGTCG
AGAGAGATAACCGAGTTTTATACCGAAGAGCGGTTACTGGCTTTGTACAA
TTTGTTACTTGCGTCATTGTTAAGGTTGAGACACGCGGAGATGGAGGAGT
GGAGGGAGGCCCCGGAGGAGTTCATGTTGGAGGAGGAACAGCGACGTCCG
GACGATGACTTGCAAGCAGCGGCCGAGCACCTTTTCTTGGCCATGTTTGA
CGCGAGAAGAGATGTCCTCGGTCCACATTTGGCGGCCATCCTCTCAGACT
ACCCACGTCAGCTCCACGCTGCCTCTCTGTCCGTCACGTCGTCCTCGTCC
TCATCCTCAGCTTCGACTTCCTCCCCCCTTCCTCCTCCAGAAGTGTGTTT
TTGGGATGCAGTTTACCTCTTGCTAGGTGTTGCTTCCTATTCCCTCCGAG
ATTTCCTCGACCTCCCATCCTGGTACACCCAATGTTTCATCCCTATGATG
CGAATCCTCCTCCTCTCCCCCTCCCTCCCACCCTCTGTAGCACCATCCCT
TCCCCCCATCCTCCTCCGCCGCCTCCTCTACCTTGTGGCGTGCGCCGCTC
CCGATGTCCCTGCTCGCTTTCGAGGAGGGGAGGGGGGTGTCTTTCACCTC
TTTTCCTGCGCGCTCGACCCCAATAATCCACGCACAGACCTGGTGGCCGC
CCTCCAAGCCATCGAGGCTGTCTCGGCCTTGCTCCACGATTGGACGTTCG
CGGAATCCGAAAAGAGGGACCCCACCCTTCCTCCTTTCCTCGGGCTGTAC
CTCACCCATGTGTACCGAGTGATTGAAACTGCAACCGAGATGGAAAATAA
ACGGAAAGCCTTGGGACTCATAAACCTGCTTTTGAAAAGTGTGGTTGACC
ATGGTGTGGTTGCCTCGTTTGCGCCTGTGATACTAGGGCCCTTGCCGGGA
TTGTGGACGTTTTCAGGCGGGGGAGGGGATGGGGAGGGAGGGAGGGAAGG
AGGGGTGGTGGCGGATTTGCGAATAAGCATCATGCAGGTGCTCATTGGGT
TGCTCCCTCGCCTGGCCGCCGCCGCGGCAGCGGTAGAAAGCAATAACGGC
CAAACTCAGCAGCAGCAGCATCAGCAGCATCATCTGGTCTCTTCCCTCCT
CCTCCCCCTCCTCACCGACGCCACCGATACCTCCCGCCCGGAAGCTGGAG
CCCTCCTTGAGGATGCCCTGAGGCTCTGGCACACCACCTTTCTCTACCTT
CCCCCCTCCCCTCCCTCCTCCCCCTCCCTCCTCCTCCCCCTCCTCCCCCT
CCTCCCCCGCCTGCCTCGCCTCTTGGAGCATCACGGCTTCGAGCTCATCA
AACCCATGATGACTCTCCTTGAAGACTACATTGTCGTCCTTTCCATTTCC
TCCCCCCCTCTCTCCTCCTCCATCCCCCAGCAACAACTGTGCTTCTCCCC
TCTCTGCGACGCCTTATCTCACTCTCTCCAGGGTGTTGCCCCTCGAGGCT
TGGTGCACGTCACAAGAGTAATGGAGACCTTTCTTATCGCCTTCCCCGAA
GCCGGCATACGGGCCCTCATAAACTCGAACATCTTAAGTTTCCTCCTTGA
TTACTCTGGCCTCCACTCCCCTCCTCCTCCTCCTTCTTCCTCTTCTCAGC
TCCCGAAACGCCTGGAGGAAGGAGAGGCCGGACGACGACGGGATGAGGGG
ATACAAGTGCAATACCTCTCCCTAATCGCACGTGCCCTTTTGACGGCTCC
TCGTGTCCTCCTTCCCCTCCTCCACGCCCTCCGGCTGGACGTCCTACTTG
TGGTTGATTCCCTTCTTGTACATTTCGACCACGTTCCTGCCGGGTCACCT
CCCGCCACCCCTTCCCTCTCTTTCTCCTCCTCCTCCTCGTTCCTCGCCTG
CTCCTCTTCGAGTCGTCGGAAGCTTTGGTGTCTATGCCTGCTATTTCTTC
TTGGGGGTGGCGAGGGAGGGAGAGAGGGAGGGGAGCTGGAGGACTTGAAT
TTCCGCAGGCCTCTCGTCATGGGTGTTCTGCAGCGGTTGGAGCAAGTATT
GAGCATTTGTGTCGACGTGATAGTAGAGGCGGAGGGCGAGGCCAAGGAAC
GCCAGGAGCAGCTGGAGGAGGAAGCGAAAGAAGCAGTAGCTGCTGCAGCT
GCAGCAGCTCCTGTCGCCGCAGGGACGGCAGCAGGTGGTGGAGGGGTTCA
TGCAGAGGTGGGGAGAGACGAGCGTCTTCTGAAAGGAATGGACTCCGGCC
GTCTCTATGGGGGGCTCGGCGACGAGTTGCTGCTAGTGGAGGACGCGACA
GAGGGAGGGGGGGAGGGAGGAGGAGGGTTCCCACCACACCCTGGAGTGGG
GGTGATGGTGGTGGAGAGGGGGGAGGTGGTATATATGCATAGGGAGGGAG
AAGCCTTGAGGGCTGCAGTGGGCGAGGCCCTTGGGAGGGCGGGAAGGGTG
GTAGGGGAGGAAGTGATAAGGCAGGCGATACAGGCAGTGCACCCTTCGAT
TTGGGTGCAGGTTGAGCAGCAGCGGCAATAGTGTTAGCAGCAGCAGCATC
ATCATCATCATTTATAGTAGAACTTATTGGAAGACTGACAGCCATACATA
CCGATGAGAGCTTTTTGTGTTGCAGTAAGTAGTTGGGAAAAGGAGGCCAT
GACTGAACGAATGAATGACGGAGTGGCACAATAATGCGCGAAGTGATGTA
AAGATACACCCCGAGAAGGGGATGGGGAAGACCCAGAAATCGAAGAAGAA
GAAGGGAAACGAGAGCAAGAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAG
AATGGAG

protein sequence of jgi.p|Nanoce1779_2|668636

>mRNA_1855-protein ID=mRNA_1855-protein|Name=jgi.p|Nanoce1779_2|668636|organism=Nannochloropsis oceanica|type=polypeptide|length=1338bp
MVSQPSLPATLGPEHVSPLYSTLLAALDTTDPAGRHQAEEVLRAFETVPN
FLDVLAVIIQGSEADVDNNARLLAVLLMQNVVRRHWRNAGSSADGEDGLR
LGKFGGERIGELMRRREGGGMATGASCDSPHAMYLQQQQRQTRPVSEEEK
ARFRAFLLSRMTEPHDLLAKNTAHVLAKVVRADWPRKWPDFFPQLLAFLP
PSSPPSNSAGQDYHQEDDLQTIRVIHALHRVTKELAGKGLLADKMAFQGM
ARLLFPIVYQHLWRSRLDSLLRALEREGGTENLIGLAQIVKTCTKILYFL
SVQHADALDPDALLAFFHDAHGALRLLLTFEKELIAASLSSFSVLPPVLH
QLAKVTKNLSALIVETQSRSPLVLRGGALPLFLHFFYDEICSITGVSSST
SSSSFCSSSFAFSTLSSPAPAAVMEAMLWDPDPADPCRKFYLNACAFLGN
CLTCPDYQHSEHASHNPSFPPSSSTSPSNGQNCGTSSKRGSPRSISFAAD
GERPPCQREMSREITEFYTEERLLALYNLLLASLLRLRHAEMEEWREAPE
EFMLEEEQRRPDDDLQAAAEHLFLAMFDARRDVLGPHLAAILSDYPRQLH
AASLSVTSSSSSSSASTSSPLPPPEVCFWDAVYLLLGVASYSLRDFLDLP
SWYTQCFIPMMRILLLSPSLPPSVAPSLPPILLRRLLYLVACAAPDVPAR
FRGGEGGVFHLFSCALDPNNPRTDLVAALQAIEAVSALLHDWTFAESEKR
DPTLPPFLGLYLTHVYRVIETATEMENKRKALGLINLLLKSVVDHGVVAS
FAPVILGPLPGLWTFSGGGGDGEGGREGGVVADLRISIMQVLIGLLPRLA
AAAAAVESNNGQTQQQQHQQHHLVSSLLLPLLTDATDTSRPEAGALLEDA
LRLWHTTFLYLPPSPPSSPSLLLPLLPLLPRLPRLLEHHGFELIKPMMTL
LEDYIVVLSISSPPLSSSIPQQQLCFSPLCDALSHSLQGVAPRGLVHVTR
VMETFLIAFPEAGIRALINSNILSFLLDYSGLHSPPPPPSSSSQLPKRLE
EGEAGRRRDEGIQVQYLSLIARALLTAPRVLLPLLHALRLDVLLVVDSLL
VHFDHVPAGSPPATPSLSFSSSSSFLACSSSSRRKLWCLCLLFLLGGGEG
GREGGELEDLNFRRPLVMGVLQRLEQVLSICVDVIVEAEGEAKERQEQLE
EEAKEAVAAAAAAAPVAAGTAAGGGGVHAEVGRDERLLKGMDSGRLYGGL
GDELLLVEDATEGGGEGGGGFPPHPGVGVMVVERGEVVYMHREGEALRAA
VGEALGRAGRVVGEEVIRQAIQAVHPSIWVQVEQQRQ*

mRNA from alignment at scaffold_4:189195..193551+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1855 ID=mRNA_1855|Name=jgi.p|Nanoce1779_2|668636|organism=Nannochloropsis oceanica|type=mRNA|length=4357bp|location=Sequence derived from alignment at scaffold_4:189195..193551+ (Nannochloropsis oceanica)
AACAGGGAGGCCAGAGCCACGGCATCTGTATCCAGCAAAAATTCAGCGCC
CTGCCTGTCCGGTGGTCATGGTCTCCCAACCCTCCCTTCCCGCCACCCTT
GGACCTGAGCATGTCTCGCCGTTGTATTCAACTCTCCTTGCCGCCCTCGA
CACCACCGACCCTGCCGGTCGTCATCAAGCGGAAGAAGTTCTGCGCGCCT
TTGAGACTGTACCCAATTTTTTGGATGTCCTGGCGGTTATCATTCAAGGT
TCTGAAGCCGACGTGGATAACAACGCGCGCTTGCTCGCAGTACTGCTCAT
GCAAAATGTTGTTCGACGACATTGGCGGAACGCCGGCAGCAGCGCTGACG
GGGAGGATGGACTAAGATTAGGAAAGTTCGGGGGCGAAAGGATTGGAGAA
CTCATGCGACGGCGCGAGGGTGGGGGTATGGCGACAGGAGCGAGCTGTGA
TAGCCCGCATGCAATGTACCTACAGCAGCAGCAGCGACAAACACGACCTG
TGAGCGAGGAAGAAAAGGCGCGCTTCCGTGCTTTTTTGCTGTCCCGCATG
ACAGAACCACATGACTTGCTCGCGAAAAATACGGCGCACGTCCTTGCGAA
AGTGGTTCGTGCCGACTGGCCACGGAAATGGCCTGACTTCTTCCCGCAGC
TCCTTGCTTTCCTTCCACCCAGCTCTCCCCCGAGCAACAGCGCTGGGCAG
GACTACCATCAAGAGGATGACCTTCAAACTATCCGTGTCATTCATGCATT
ACATCGCGTTACCAAGGAACTTGCAGGTAAGGGTCTTTTAGCAGACAAGA
TGGCGTTTCAAGGAATGGCTCGCCTCCTGTTCCCAATTGTATACCAGCAC
CTCTGGCGTTCACGACTCGATAGCCTCCTACGTGCCCTCGAGAGGGAAGG
AGGTACGGAGAACCTGATAGGCTTGGCGCAGATTGTCAAAACGTGCACCA
AGATCTTGTACTTCCTCTCAGTACAGCACGCCGATGCCCTGGACCCCGAT
GCCCTGCTCGCCTTCTTTCACGACGCCCACGGAGCACTGCGCCTCCTCCT
GACCTTCGAGAAGGAGCTCATTGCTGCTTCCCTCTCCTCCTTCTCTGTTT
TACCCCCTGTCCTCCATCAACTGGCCAAAGTCACCAAGAATCTGAGTGCA
TTAATTGTCGAGACGCAAAGTCGCTCTCCCCTTGTACTGCGCGGTGGGGC
GCTTCCCCTCTTCCTCCACTTCTTTTATGACGAGATCTGCAGTATCACTG
GCGTCTCTTCCTCCACCTCTTCCTCCTCCTTCTGCTCATCATCCTTCGCT
TTCTCCACCTTGTCTTCACCTGCCCCTGCAGCGGTCATGGAAGCCATGCT
TTGGGACCCCGATCCCGCTGATCCCTGCAGAAAATTCTACCTTAACGCGT
GTGCCTTTCTAGGGAACTGCCTCACTTGTCCTGACTACCAACATTCGGAG
CATGCCTCTCACAATCCTTCCTTCCCTCCCTCTTCCTCCACCAGTCCCTC
CAATGGCCAGAACTGTGGCACGAGTAGTAAAAGGGGGTCGCCGCGTTCGA
TTTCGTTCGCCGCGGACGGAGAGAGGCCCCCATGTCAAAGGGAGATGTCG
AGAGAGATAACCGAGTTTTATACCGAAGAGCGGTTACTGGCTTTGTACAA
TTTGTTACTTGCGTCATTGTTAAGGTTGAGACACGCGGAGATGGAGGAGT
GGAGGGAGGCCCCGGAGGAGTTCATGTTGGAGGAGGAACAGCGACGTCCG
GACGATGACTTGCAAGCAGCGGCCGAGCACCTTTTCTTGGCCATGTTTGA
CGCGAGAAGAGATGTCCTCGGTCCACATTTGGCGGCCATCCTCTCAGACT
ACCCACGTCAGCTCCACGCTGCCTCTCTGTCCGTCACGTCGTCCTCGTCC
TCATCCTCAGCTTCGACTTCCTCCCCCCTTCCTCCTCCAGAAGTGTGTTT
TTGGGATGCAGTTTACCTCTTGCTAGGTGTTGCTTCCTATTCCCTCCGAG
ATTTCCTCGACCTCCCATCCTGGTACACCCAATGTTTCATCCCTATGATG
CGAATCCTCCTCCTCTCCCCCTCCCTCCCACCCTCTGTAGCACCATCCCT
TCCCCCCATCCTCCTCCGCCGCCTCCTCTACCTTGTGGCGTGCGCCGCTC
CCGATGTCCCTGCTCGCTTTCGAGGAGGGGAGGGGGGTGTCTTTCACCTC
TTTTCCTGCGCGCTCGACCCCAATAATCCACGCACAGACCTGGTGGCCGC
CCTCCAAGCCATCGAGGCTGTCTCGGCCTTGCTCCACGATTGGACGTTCG
CGGAATCCGAAAAGAGGGACCCCACCCTTCCTCCTTTCCTCGGGCTGTAC
CTCACCCATGTGTACCGAGTGATTGAAACTGCAACCGAGATGGAAAATAA
ACGGAAAGCCTTGGGACTCATAAACCTGCTTTTGAAAAGTGTGGTTGACC
ATGGTGTGGTTGCCTCGTTTGCGCCTGTGATACTAGGGCCCTTGCCGGGA
TTGTGGACGTTTTCAGGCGGGGGAGGGGATGGGGAGGGAGGGAGGGAAGG
AGGGGTGGTGGCGGATTTGCGAATAAGCATCATGCAGGTGCTCATTGGGT
TGCTCCCTCGCCTGGCCGCCGCCGCGGCAGCGGTAGAAAGCAATAACGGC
CAAACTCAGCAGCAGCAGCATCAGCAGCATCATCTGGTCTCTTCCCTCCT
CCTCCCCCTCCTCACCGACGCCACCGATACCTCCCGCCCGGAAGCTGGAG
CCCTCCTTGAGGATGCCCTGAGGCTCTGGCACACCACCTTTCTCTACCTT
CCCCCCTCCCCTCCCTCCTCCCCCTCCCTCCTCCTCCCCCTCCTCCCCCT
CCTCCCCCGCCTGCCTCGCCTCTTGGAGCATCACGGCTTCGAGCTCATCA
AACCCATGATGACTCTCCTTGAAGACTACATTGTCGTCCTTTCCATTTCC
TCCCCCCCTCTCTCCTCCTCCATCCCCCAGCAACAACTGTGCTTCTCCCC
TCTCTGCGACGCCTTATCTCACTCTCTCCAGGGTGTTGCCCCTCGAGGCT
TGGTGCACGTCACAAGAGTAATGGAGACCTTTCTTATCGCCTTCCCCGAA
GCCGGCATACGGGCCCTCATAAACTCGAACATCTTAAGTTTCCTCCTTGA
TTACTCTGGCCTCCACTCCCCTCCTCCTCCTCCTTCTTCCTCTTCTCAGC
TCCCGAAACGCCTGGAGGAAGGAGAGGCCGGACGACGACGGGATGAGGGG
ATACAAGTGCAATACCTCTCCCTAATCGCACGTGCCCTTTTGACGGCTCC
TCGTGTCCTCCTTCCCCTCCTCCACGCCCTCCGGCTGGACGTCCTACTTG
TGGTTGATTCCCTTCTTGTACATTTCGACCACGTTCCTGCCGGGTCACCT
CCCGCCACCCCTTCCCTCTCTTTCTCCTCCTCCTCCTCGTTCCTCGCCTG
CTCCTCTTCGAGTCGTCGGAAGCTTTGGTGTCTATGCCTGCTATTTCTTC
TTGGGGGTGGCGAGGGAGGGAGAGAGGGAGGGGAGCTGGAGGACTTGAAT
TTCCGCAGGCCTCTCGTCATGGGTGTTCTGCAGCGGTTGGAGCAAGTATT
GAGCATTTGTGTCGACGTGATAGTAGAGGCGGAGGGCGAGGCCAAGGAAC
GCCAGGAGCAGCTGGAGGAGGAAGCGAAAGAAGCAGTAGCTGCTGCAGCT
GCAGCAGCTCCTGTCGCCGCAGGGACGGCAGCAGGTGGTGGAGGGGTTCA
TGCAGAGGTGGGGAGAGACGAGCGTCTTCTGAAAGGAATGGACTCCGGCC
GTCTCTATGGGGGGCTCGGCGACGAGTTGCTGCTAGTGGAGGACGCGACA
GAGGGAGGGGGGGAGGGAGGAGGAGGGTTCCCACCACACCCTGGAGTGGG
GGTGATGGTGGTGGAGAGGGGGGAGGTGGTATATATGCATAGGGAGGGAG
AAGCCTTGAGGGCTGCAGTGGGCGAGGCCCTTGGGAGGGCGGGAAGGGTG
GTAGGGGAGGAAGTGATAAGGCAGGCGATACAGGCAGTGCACCCTTCGAT
TTGGGTGCAGGTTGAGCAGCAGCGGCAATAGTGTTAGCAGCAGCAGCATC
ATCATCATCATTTATAGTAGAACTTATTGGAAGACTGACAGCCATACATA
CCGATGAGAGCTTTTTGTGTTGCAGTAAGTAGTTGGGAAAAGGAGGCCAT
GACTGAACGAATGAATGACGGAGTGGCACAATAATGCGCGAAGTGATGTA
AAGATACACCCCGAGAAGGGGATGGGGAAGACCCAGAAATCGAAGAAGAA
GAAGGGAAACGAGAGCAAGAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAG
AATGGAG

Coding sequence (CDS) from alignment at scaffold_4:189195..193551+

>mRNA_1855 ID=mRNA_1855|Name=jgi.p|Nanoce1779_2|668636|organism=Nannochloropsis oceanica|type=CDS|length=4014bp|location=Sequence derived from alignment at scaffold_4:189195..193551+ (Nannochloropsis oceanica)
ATGGTCTCCCAACCCTCCCTTCCCGCCACCCTTGGACCTGAGCATGTCTC
GCCGTTGTATTCAACTCTCCTTGCCGCCCTCGACACCACCGACCCTGCCG
GTCGTCATCAAGCGGAAGAAGTTCTGCGCGCCTTTGAGACTGTACCCAAT
TTTTTGGATGTCCTGGCGGTTATCATTCAAGGTTCTGAAGCCGACGTGGA
TAACAACGCGCGCTTGCTCGCAGTACTGCTCATGCAAAATGTTGTTCGAC
GACATTGGCGGAACGCCGGCAGCAGCGCTGACGGGGAGGATGGACTAAGA
TTAGGAAAGTTCGGGGGCGAAAGGATTGGAGAACTCATGCGACGGCGCGA
GGGTGGGGGTATGGCGACAGGAGCGAGCTGTGATAGCCCGCATGCAATGT
ACCTACAGCAGCAGCAGCGACAAACACGACCTGTGAGCGAGGAAGAAAAG
GCGCGCTTCCGTGCTTTTTTGCTGTCCCGCATGACAGAACCACATGACTT
GCTCGCGAAAAATACGGCGCACGTCCTTGCGAAAGTGGTTCGTGCCGACT
GGCCACGGAAATGGCCTGACTTCTTCCCGCAGCTCCTTGCTTTCCTTCCA
CCCAGCTCTCCCCCGAGCAACAGCGCTGGGCAGGACTACCATCAAGAGGA
TGACCTTCAAACTATCCGTGTCATTCATGCATTACATCGCGTTACCAAGG
AACTTGCAGGTAAGGGTCTTTTAGCAGACAAGATGGCGTTTCAAGGAATG
GCTCGCCTCCTGTTCCCAATTGTATACCAGCACCTCTGGCGTTCACGACT
CGATAGCCTCCTACGTGCCCTCGAGAGGGAAGGAGGTACGGAGAACCTGA
TAGGCTTGGCGCAGATTGTCAAAACGTGCACCAAGATCTTGTACTTCCTC
TCAGTACAGCACGCCGATGCCCTGGACCCCGATGCCCTGCTCGCCTTCTT
TCACGACGCCCACGGAGCACTGCGCCTCCTCCTGACCTTCGAGAAGGAGC
TCATTGCTGCTTCCCTCTCCTCCTTCTCTGTTTTACCCCCTGTCCTCCAT
CAACTGGCCAAAGTCACCAAGAATCTGAGTGCATTAATTGTCGAGACGCA
AAGTCGCTCTCCCCTTGTACTGCGCGGTGGGGCGCTTCCCCTCTTCCTCC
ACTTCTTTTATGACGAGATCTGCAGTATCACTGGCGTCTCTTCCTCCACC
TCTTCCTCCTCCTTCTGCTCATCATCCTTCGCTTTCTCCACCTTGTCTTC
ACCTGCCCCTGCAGCGGTCATGGAAGCCATGCTTTGGGACCCCGATCCCG
CTGATCCCTGCAGAAAATTCTACCTTAACGCGTGTGCCTTTCTAGGGAAC
TGCCTCACTTGTCCTGACTACCAACATTCGGAGCATGCCTCTCACAATCC
TTCCTTCCCTCCCTCTTCCTCCACCAGTCCCTCCAATGGCCAGAACTGTG
GCACGAGTAGTAAAAGGGGGTCGCCGCGTTCGATTTCGTTCGCCGCGGAC
GGAGAGAGGCCCCCATGTCAAAGGGAGATGTCGAGAGAGATAACCGAGTT
TTATACCGAAGAGCGGTTACTGGCTTTGTACAATTTGTTACTTGCGTCAT
TGTTAAGGTTGAGACACGCGGAGATGGAGGAGTGGAGGGAGGCCCCGGAG
GAGTTCATGTTGGAGGAGGAACAGCGACGTCCGGACGATGACTTGCAAGC
AGCGGCCGAGCACCTTTTCTTGGCCATGTTTGACGCGAGAAGAGATGTCC
TCGGTCCACATTTGGCGGCCATCCTCTCAGACTACCCACGTCAGCTCCAC
GCTGCCTCTCTGTCCGTCACGTCGTCCTCGTCCTCATCCTCAGCTTCGAC
TTCCTCCCCCCTTCCTCCTCCAGAAGTGTGTTTTTGGGATGCAGTTTACC
TCTTGCTAGGTGTTGCTTCCTATTCCCTCCGAGATTTCCTCGACCTCCCA
TCCTGGTACACCCAATGTTTCATCCCTATGATGCGAATCCTCCTCCTCTC
CCCCTCCCTCCCACCCTCTGTAGCACCATCCCTTCCCCCCATCCTCCTCC
GCCGCCTCCTCTACCTTGTGGCGTGCGCCGCTCCCGATGTCCCTGCTCGC
TTTCGAGGAGGGGAGGGGGGTGTCTTTCACCTCTTTTCCTGCGCGCTCGA
CCCCAATAATCCACGCACAGACCTGGTGGCCGCCCTCCAAGCCATCGAGG
CTGTCTCGGCCTTGCTCCACGATTGGACGTTCGCGGAATCCGAAAAGAGG
GACCCCACCCTTCCTCCTTTCCTCGGGCTGTACCTCACCCATGTGTACCG
AGTGATTGAAACTGCAACCGAGATGGAAAATAAACGGAAAGCCTTGGGAC
TCATAAACCTGCTTTTGAAAAGTGTGGTTGACCATGGTGTGGTTGCCTCG
TTTGCGCCTGTGATACTAGGGCCCTTGCCGGGATTGTGGACGTTTTCAGG
CGGGGGAGGGGATGGGGAGGGAGGGAGGGAAGGAGGGGTGGTGGCGGATT
TGCGAATAAGCATCATGCAGGTGCTCATTGGGTTGCTCCCTCGCCTGGCC
GCCGCCGCGGCAGCGGTAGAAAGCAATAACGGCCAAACTCAGCAGCAGCA
GCATCAGCAGCATCATCTGGTCTCTTCCCTCCTCCTCCCCCTCCTCACCG
ACGCCACCGATACCTCCCGCCCGGAAGCTGGAGCCCTCCTTGAGGATGCC
CTGAGGCTCTGGCACACCACCTTTCTCTACCTTCCCCCCTCCCCTCCCTC
CTCCCCCTCCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCGCCTGCCTC
GCCTCTTGGAGCATCACGGCTTCGAGCTCATCAAACCCATGATGACTCTC
CTTGAAGACTACATTGTCGTCCTTTCCATTTCCTCCCCCCCTCTCTCCTC
CTCCATCCCCCAGCAACAACTGTGCTTCTCCCCTCTCTGCGACGCCTTAT
CTCACTCTCTCCAGGGTGTTGCCCCTCGAGGCTTGGTGCACGTCACAAGA
GTAATGGAGACCTTTCTTATCGCCTTCCCCGAAGCCGGCATACGGGCCCT
CATAAACTCGAACATCTTAAGTTTCCTCCTTGATTACTCTGGCCTCCACT
CCCCTCCTCCTCCTCCTTCTTCCTCTTCTCAGCTCCCGAAACGCCTGGAG
GAAGGAGAGGCCGGACGACGACGGGATGAGGGGATACAAGTGCAATACCT
CTCCCTAATCGCACGTGCCCTTTTGACGGCTCCTCGTGTCCTCCTTCCCC
TCCTCCACGCCCTCCGGCTGGACGTCCTACTTGTGGTTGATTCCCTTCTT
GTACATTTCGACCACGTTCCTGCCGGGTCACCTCCCGCCACCCCTTCCCT
CTCTTTCTCCTCCTCCTCCTCGTTCCTCGCCTGCTCCTCTTCGAGTCGTC
GGAAGCTTTGGTGTCTATGCCTGCTATTTCTTCTTGGGGGTGGCGAGGGA
GGGAGAGAGGGAGGGGAGCTGGAGGACTTGAATTTCCGCAGGCCTCTCGT
CATGGGTGTTCTGCAGCGGTTGGAGCAAGTATTGAGCATTTGTGTCGACG
TGATAGTAGAGGCGGAGGGCGAGGCCAAGGAACGCCAGGAGCAGCTGGAG
GAGGAAGCGAAAGAAGCAGTAGCTGCTGCAGCTGCAGCAGCTCCTGTCGC
CGCAGGGACGGCAGCAGGTGGTGGAGGGGTTCATGCAGAGGTGGGGAGAG
ACGAGCGTCTTCTGAAAGGAATGGACTCCGGCCGTCTCTATGGGGGGCTC
GGCGACGAGTTGCTGCTAGTGGAGGACGCGACAGAGGGAGGGGGGGAGGG
AGGAGGAGGGTTCCCACCACACCCTGGAGTGGGGGTGATGGTGGTGGAGA
GGGGGGAGGTGGTATATATGCATAGGGAGGGAGAAGCCTTGAGGGCTGCA
GTGGGCGAGGCCCTTGGGAGGGCGGGAAGGGTGGTAGGGGAGGAAGTGAT
AAGGCAGGCGATACAGGCAGTGCACCCTTCGATTTGGGTGCAGGTTGAGC
AGCAGCGGCAATAG

Synonyms

Publications