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Properties
| Property Name | Value |
|---|
| TranscriptId | 628122 |
| Track | FilteredModels2 |
| ProteinId | 628036 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:109433..112497 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1829 ID=mRNA_1829|Name=jgi.p|Nanoce1779_2|628036|organism=Nannochloropsis oceanica|type=mRNA|length=2421bp
AACAGGGGGAAACAATCGTTTGCCGTCCTTGGCTGGGGCAGGGTAGCCAG
GGCCGGGAGTGCGGGCAGAGGCTGCCGGCGGGGCGACTTTTCGGAGCAGC
ACGAGAACAGCGCGGCCTGATTTCGACTCAGCAGTCTTCTCGCTTGAGAA
AAGAGAGAATGGTGGACAGTTCAATATCGGTGCGGCACCATGACCCCAGG
TCTTCCGCTGCAGTCATGGCAGGTACCTTCCAGCCTCGACACTACGACAC
GCTAAAAGAGGAATTTCTAGGCCAACACATCCTGGCAGACTTGGCTGCCG
CCATGGGAGCATCGGCGTTGGTTGCCCCTTTTGTTAGCGTCATCGACAAA
GCCATCATCCAAAACCAAGCCGGTGCTGCCTCGCTTGAATCCTCCATCGT
CTCTTCATTTGCCTCCCTCCTCCGCAATCCTCTCCCCTTTCTCCGCCGCC
CCGAGGTCCTTATGGTCTGGTCCGTCTATGGTATCACCTACTTTTCAGCC
AATGTCATCAACACCACCAGCAAGGCCTACACCTTCAAACCTGAACTCCC
TCGGCTCCTCGCCACCACTGCCGCCAACATGGGTGCTGGCATTGCCAAAG
ACAGGACGTACGCAAGAATGTTTGGGACCGTCACTCCTCGCGGGCTCCCT
GCCTCTTCCTACCTCTTCTTCTTTTCGAGGGATTTGGTGACAATGGGCGC
GTCGTTTAATATTCCTGAGCCTTTGGCCGAGGAGATGCACACTGCCTTGG
GCATGCCCTTGGAGAAGGCGGAGATAGCGGCACAGCTTTTTTGTCCCGTG
GCCACGCAGTTCCTGACCACGCCAATGCACCTGCTTGGCCTCGACATGTA
TAACCGCCCTGCATCCTCATGGAAGAATCGCTACGAGCTGATTGCGTCGA
GCTACAGGAAAACGGTGATGGCGCGGATAGCGAGGATTTTGCCTGCGTTT
GGATTCGGCGGGTTGGGAAACAAGAGGATTAGGGCTGAGGCACATGCATG
GATTAAAAGAATGCATCAGCCGAAGCTGAAGGGGGGGAAGGAGCCGGTGG
TGGTGTTGGGGAGGGGGATGCATGTGGATCTAGGGGAGGGGAGACAGGGA
GGGATAGGGGGGGGTGTAGTGCCGATTTTTTCGCCGGGTTTGCTTCCACG
GCCGGTCTTGCCGTCTTTGTTGCCCGTGCCGGCATGGGCGGCGGGCCTTC
AATAGAAGCCCACGGAGGTAGAGAACGAGGGAGGGAGGGAGGGGGAGGAG
CGTGAATAGGATGGTTTTGTTTAGTGATGCAATGCACAGCGGATGGAGTA
TTGTTTGGCGTGCGGGAGCTGGTGGGACGTGCCCAGTACCTCCATTTTAT
CTAGGGTTGGCCTACACCTGATTGATACAGTCCGACATTTTTGTTATGGG
TGTACCACCCTTTGAGGGAGAGGAAAGGATTCAGGCTGTCTGTGTGTGAG
GAAAGGATTCAGGGCGTCTGTGTTTTGAAAGGATTCAGGGTGTCTGTGTG
TGTGGGAAAGATTCGGGCGACCCGCGCAATGTGGGCTATGCAAAGGGAAG
GAGGATTTTAGGAGGTGGGGGAGGGAAAGGAGGAGAAAGAGGGGGAAAAG
AGAAGAGGAAAAGGTTTTTGTCATGTAGCTATTGATGGTTGAGAAAGTAA
CAAGAAAGTAGTGCCATGCTTGAATGAATAGAGAGAAAGAGCGATAGAGA
GAGTGGAGTGAAACTTGCCAGGGCCAAGGAGGGTGTAACACTGCCTCCAA
AACCATGCACCTTCTCTCCCCCCCCTTCCCTCCTGCCCACCCTCCCACCT
TCCTGCCCGCCGTCCCTCGCTTTGTCAATACGTCAGGAGACGCTTCGAAG
GGCTTTCAGCTCATTTTGAGGGTCTTGTTCGATAGAGAATTTTGAATTTA
AGGCCCACGAAGGACATGTGTTGGTAATGTAGGTAAATTAGCAGTGGGAG
TAGAGTGTTTAGATCTTGAGTCAGAAGTAGTAGAAGAAGAAAATTAAGAT
GAAAAAGCAGAAAAGATGAATCCCTAAGCGAGCCGCCCAGCAGAGAATAA
AGAGGACTATATGAGGGAGGAAGGTAATGTAGAGAGAAGGGATGACGAGA
AAGAAAAATGAAAGTTAACATGACAGAAAAAATTTTGGCGTAAAAGAGGC
AGAGCAGAGAAAGAGGAAGAGCGAACGTAAGTCAGGGATGGAGTAGAGAG
AGCGAGACGAGATGACGTGCACGCACAAGGCACGAATAGATAATTGCTTC
GTTGTGTGGGTGGCGAAGTGATGGGTGACTGCCTTTACGGCTTGAACGAT
CCATACACCTGCAACGGCAGGACCCCGGGCAAAGCTTGATATGCGAGACT
CAAATTTCACTCATACGTAAAGTGAATACACAACCAGAGATAAAGTGAAA
TTAGATGGAGCATGCACTCGC back to topprotein sequence of jgi.p|Nanoce1779_2|628036 >mRNA_1829-protein ID=mRNA_1829-protein|Name=jgi.p|Nanoce1779_2|628036|organism=Nannochloropsis oceanica|type=polypeptide|length=349bp
MVDSSISVRHHDPRSSAAVMAGTFQPRHYDTLKEEFLGQHILADLAAAMG
ASALVAPFVSVIDKAIIQNQAGAASLESSIVSSFASLLRNPLPFLRRPEV
LMVWSVYGITYFSANVINTTSKAYTFKPELPRLLATTAANMGAGIAKDRT
YARMFGTVTPRGLPASSYLFFFSRDLVTMGASFNIPEPLAEEMHTALGMP
LEKAEIAAQLFCPVATQFLTTPMHLLGLDMYNRPASSWKNRYELIASSYR
KTVMARIARILPAFGFGGLGNKRIRAEAHAWIKRMHQPKLKGGKEPVVVL
GRGMHVDLGEGRQGGIGGGVVPIFSPGLLPRPVLPSLLPVPAWAAGLQ* back to topmRNA from alignment at scaffold_4:109433..112497+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1829 ID=mRNA_1829|Name=jgi.p|Nanoce1779_2|628036|organism=Nannochloropsis oceanica|type=mRNA|length=3065bp|location=Sequence derived from alignment at scaffold_4:109433..112497+ (Nannochloropsis oceanica)
AACAGGGGGAAACAATCGTTTGCCGTCCTTGGCTGGGGCAGGGTAGCCAG
GGCCGGGAGTGCGGGCAGAGGCTGCCGGCGGGGCGACTTTTCGGAGCAGC
ACGAGAACAGCGCGGCCTGATTTCGACTCAGCAGTCTTCTCGCTTGAGAA
AAGGTGAGCGTACGCTAAACGCAGCATTAAAATATTCTTTTAACATCCTA
TGCCCAGCGATAGGGCGTCAAGCCGTCTTGGTATGCGCCTCGCTACGACC
AAAAACCCGCACGTGACACCCCCATACTCGCAGCGGCTCAAATATTCTCC
GTGCCCATCCCCATATCGTTCGTCCTCCTCTCACTCTTTTTCTCTGTCAT
TTTCCAAACTACCCGCATAGAGAGAATGGTGGACAGTTCAATATCGGTGC
GGCACCATGACCCCAGGTCTTCCGCTGCAGTCATGGCAGGTACCTTCCAG
CCTCGACACTACGACACGCTAAAAGAGGAATTTCTAGGCCAACACATCCT
GGCAGACTTGGCTGCCGCCATGGGAGCATCGGCGTTGGTTGCCCCTTTTG
TTAGGTATGTGTGCGTCTGCTACGTTTAATTGTGGTGGTACCTTGGATTT
ATAAGACCATTGGGACCACGGATCTTCTACTCATTACCTCCATACCTCCC
TCTTTCTTCATCCAGCGTCATCGACAAAGCCATCATCCAAAACCAAGCCG
GTGCTGCCTCGCTTGAATCCTCCATCGTCTCTTCATTTGCCTCCCTCCTC
CGCAATCCTCTCCCCTTTCTCCGCCGCCCCGAGGTCCTTATGGTCTGGTC
CGTCTATGGTATCACCTACTTTTCAGCCAATGTCATCAACACCACCAGCA
AGGCCTACACCTTCAAACCTGAACTCCCTCGGCTCCTCGCCACCACTGCC
GCCAACATGGGTGCTGGCATTGCCAAAGACAGGACGTACGCAAGAATGTT
TGGGACCGTCACTCCTCGCGGGCTCCCTGCCTCTTCCTACCTCTTCTTCT
TTTCGAGGGATTTGGTGACAATGGGCGCGTCGTTTAATATTCCTGAGCCT
TTGGCCGAGGAGATGCACACTGCCTTGGGCATGCCCTTGGAGAAGGCGGA
GATAGCGGCACAGGTATGAGAGAGTGGAAGGAAGAGAGGGAAATGCTGTA
AGATGACCTCGCGTTTAGTTGTCTTATTTTAGCTGTCGTCGTGTATTCAA
TTTATTCCTACTCTGTTGCTTCTGTCTGCAATGGTAGTCTGTCTCCATGT
TCTGTCTCCATGTAGAGGTGTGTATGTGGCTGAGTGTATGTGGCTGTGTG
TATGTGGCCGTGAGTCTGAGGGACGCCGCAAGATCTCACATAACTTTTAT
TCTTGCCCTTTACTCATCCCCCTCCCCCTCCCTCACTTCCTCCTTCCCTC
TTTCCCTCCTTCCCTCCCTCCCATCCCAGCTTTTTTGTCCCGTGGCCACG
CAGTTCCTGACCACGCCAATGCACCTGCTTGGCCTCGACATGTATAACCG
CCCTGCATCCTCATGGAAGAATCGCTACGAGCTGATTGCGTCGAGCTACA
GGAAAACGGTGATGGCGCGGATAGCGAGGATTTTGCCTGCGTTTGGATTC
GGCGGGTTGGGAAACAAGAGGATTAGGGCTGAGGCACATGCATGGATTAA
AAGAATGCATCAGCCGAAGCTGAAGGGGGGGAAGGAGCCGGTGGTGGTGT
TGGGGAGGGGGATGCATGTGGATCTAGGGGAGGGGAGACAGGGAGGGATA
GGGGGGGGTGTAGTGCCGATTTTTTCGCCGGGTTTGCTTCCACGGCCGGT
CTTGCCGTCTTTGTTGCCCGTGCCGGCATGGGCGGCGGGCCTTCAATAGA
AGCCCACGGAGGTAGAGAACGAGGGAGGGAGGGAGGGGGAGGAGCGTGAA
TAGGATGGTTTTGTTTAGTGATGCAATGCACAGCGGATGGAGTATTGTTT
GGCGTGCGGGAGCTGGTGGGACGTGCCCAGTACCTCCATTTTATCTAGGG
TTGGCCTACACCTGATTGATACAGTCCGACATTTTTGTTATGGGTGTACC
ACCCTTTGAGGGAGAGGAAAGGATTCAGGCTGTCTGTGTGTGAGGAAAGG
ATTCAGGGCGTCTGTGTTTTGAAAGGATTCAGGGTGTCTGTGTGTGTGGG
AAAGATTCGGGCGACCCGCGCAATGTGGGCTATGCAAAGGGAAGGAGGAT
TTTAGGAGGTGGGGGAGGGAAAGGAGGAGAAAGAGGGGGAAAAGAGAAGA
GGAAAAGGTTTTTGTCATGTAGCTATTGATGGTTGAGAAAGTAACAAGAA
AGTAGTGCCATGCTTGAATGAATAGAGAGAAAGAGCGATAGAGAGAGTGG
AGTGAAACTTGCCAGGGCCAAGGAGGGTGTAACACTGCCTCCAAAACCAT
GCACCTTCTCTCCCCCCCCTTCCCTCCTGCCCACCCTCCCACCTTCCTGC
CCGCCGTCCCTCGCTTTGTCAATACGTCAGGAGACGCTTCGAAGGGCTTT
CAGCTCATTTTGAGGGTCTTGTTCGATAGAGAATTTTGAATTTAAGGCCC
ACGAAGGACATGTGTTGGTAATGTAGGTAAATTAGCAGTGGGAGTAGAGT
GTTTAGATCTTGAGTCAGAAGTAGTAGAAGAAGAAAATTAAGATGAAAAA
GCAGAAAAGATGAATCCCTAAGCGAGCCGCCCAGCAGAGAATAAAGAGGA
CTATATGAGGGAGGAAGGTAATGTAGAGAGAAGGGATGACGAGAAAGAAA
AATGAAAGTTAACATGACAGAAAAAATTTTGGCGTAAAAGAGGCAGAGCA
GAGAAAGAGGAAGAGCGAACGTAAGTCAGGGATGGAGTAGAGAGAGCGAG
ACGAGATGACGTGCACGCACAAGGCACGAATAGATAATTGCTTCGTTGTG
TGGGTGGCGAAGTGATGGGTGACTGCCTTTACGGCTTGAACGATCCATAC
ACCTGCAACGGCAGGACCCCGGGCAAAGCTTGATATGCGAGACTCAAATT
TCACTCATACGTAAAGTGAATACACAACCAGAGATAAAGTGAAATTAGAT
GGAGCATGCACTCGC back to topCoding sequence (CDS) from alignment at scaffold_4:109433..112497+ >mRNA_1829 ID=mRNA_1829|Name=jgi.p|Nanoce1779_2|628036|organism=Nannochloropsis oceanica|type=CDS|length=3141bp|location=Sequence derived from alignment at scaffold_4:109433..112497+ (Nannochloropsis oceanica)
ATGGTGGACAGTTCAATATCGGTGCGGCACCATGACCCCAGGTCTTCCGC
TGCAGTCATGGCAGGTACCTTCCAGCCTCGACACTACGACACGCTAAAAG
AGGAATTTCTAGGCCAACACATCCTGGCAGACTTGGCTGCCGCCATGGGA
GCATCGGCGTTGGTTGCCCCTTTTGTTAGCGTCATCGACAAAGCCATCAT
CCAAAACCAAGCCGGTGCTGCCTCGCTTGAATCCTCCATCGTCTCTTCAT
TTGCCTCCCTCCTCCGCAATCCTCTCCCCTTTCTCCGCCGCCCCGAGGTC
CTTATGGTCTGGTCCGTCTATGGTATCACCTACTTTTCAGCCAATGTCAT
CAACACCACCAGCAAGGCCTACACCTTCAAACCTGAACTCCCTCGGCTCC
TCGCCACCACTGCCGCCAACATGGGTGCTGGCATTGCCAAAGACAGGACG
TACGCAAGAATGTTTGGGACCGTCACTCCTCGCGGGCTCCCTGCCTCTTC
CTACCTCTTCTTCTTTTCGAGGGATTTGGTGACAATGGGCGCGTCGTTTA
ATATTCCTGAGCCTTTGGCCGAGGAGATGCACACTGCCTTGGGCATGCCC
TTGGAGAAGGCGGAGATAGCGGCACAGCTTTTTTGTCCCGTGGCCACGCA
GTTCCTGACCACGCCAATGCACCTGCTTGGCCTCGACATGTATAACCGCC
CTGCATCCTCATGGAAGAATCGCTACGAGCTGATTGCGTCGAGCTACAGG
AAAACGGTGATGGCGCGGATAGCGAGGATTTTGCCTGCGTTTGGATTCGG
CGGGTTGGGAAACAAGAGGATTAGGGCTGAGGCACATGCATGGATTAAAA
GAATGCATCAGCCGAAGCTGAAGGGGGGGAAGGAGCCGGTGGTGGTGTTG
GGGAGGGGGATGCATGTGGATCTAGGGGAGGGGAGACAGGGAGGGATAGG
GGGGGGTGTAGTGCCGATTTTTTCGCCGGGTTTGCTTCCACGGCCGGTCT
TGCCGTCTTTGTTGCCCGTGCCGGCATGGGCGGCGGGCCTTCAATAGATG
GTGGACAGTTCAATATCGGTGCGGCACCATGACCCCAGGTCTTCCGCTGC
AGTCATGGCAGGTACCTTCCAGCCTCGACACTACGACACGCTAAAAGAGG
AATTTCTAGGCCAACACATCCTGGCAGACTTGGCTGCCGCCATGGGAGCA
TCGGCGTTGGTTGCCCCTTTTGTTAGCGTCATCGACAAAGCCATCATCCA
AAACCAAGCCGGTGCTGCCTCGCTTGAATCCTCCATCGTCTCTTCATTTG
CCTCCCTCCTCCGCAATCCTCTCCCCTTTCTCCGCCGCCCCGAGGTCCTT
ATGGTCTGGTCCGTCTATGGTATCACCTACTTTTCAGCCAATGTCATCAA
CACCACCAGCAAGGCCTACACCTTCAAACCTGAACTCCCTCGGCTCCTCG
CCACCACTGCCGCCAACATGGGTGCTGGCATTGCCAAAGACAGGACGTAC
GCAAGAATGTTTGGGACCGTCACTCCTCGCGGGCTCCCTGCCTCTTCCTA
CCTCTTCTTCTTTTCGAGGGATTTGGTGACAATGGGCGCGTCGTTTAATA
TTCCTGAGCCTTTGGCCGAGGAGATGCACACTGCCTTGGGCATGCCCTTG
GAGAAGGCGGAGATAGCGGCACAGCTTTTTTGTCCCGTGGCCACGCAGTT
CCTGACCACGCCAATGCACCTGCTTGGCCTCGACATGTATAACCGCCCTG
CATCCTCATGGAAGAATCGCTACGAGCTGATTGCGTCGAGCTACAGGAAA
ACGGTGATGGCGCGGATAGCGAGGATTTTGCCTGCGTTTGGATTCGGCGG
GTTGGGAAACAAGAGGATTAGGGCTGAGGCACATGCATGGATTAAAAGAA
TGCATCAGCCGAAGCTGAAGGGGGGGAAGGAGCCGGTGGTGGTGTTGGGG
AGGGGGATGCATGTGGATCTAGGGGAGGGGAGACAGGGAGGGATAGGGGG
GGGTGTAGTGCCGATTTTTTCGCCGGGTTTGCTTCCACGGCCGGTCTTGC
CGTCTTTGTTGCCCGTGCCGGCATGGGCGGCGGGCCTTCAATAGATGGTG
GACAGTTCAATATCGGTGCGGCACCATGACCCCAGGTCTTCCGCTGCAGT
CATGGCAGGTACCTTCCAGCCTCGACACTACGACACGCTAAAAGAGGAAT
TTCTAGGCCAACACATCCTGGCAGACTTGGCTGCCGCCATGGGAGCATCG
GCGTTGGTTGCCCCTTTTGTTAGCGTCATCGACAAAGCCATCATCCAAAA
CCAAGCCGGTGCTGCCTCGCTTGAATCCTCCATCGTCTCTTCATTTGCCT
CCCTCCTCCGCAATCCTCTCCCCTTTCTCCGCCGCCCCGAGGTCCTTATG
GTCTGGTCCGTCTATGGTATCACCTACTTTTCAGCCAATGTCATCAACAC
CACCAGCAAGGCCTACACCTTCAAACCTGAACTCCCTCGGCTCCTCGCCA
CCACTGCCGCCAACATGGGTGCTGGCATTGCCAAAGACAGGACGTACGCA
AGAATGTTTGGGACCGTCACTCCTCGCGGGCTCCCTGCCTCTTCCTACCT
CTTCTTCTTTTCGAGGGATTTGGTGACAATGGGCGCGTCGTTTAATATTC
CTGAGCCTTTGGCCGAGGAGATGCACACTGCCTTGGGCATGCCCTTGGAG
AAGGCGGAGATAGCGGCACAGCTTTTTTGTCCCGTGGCCACGCAGTTCCT
GACCACGCCAATGCACCTGCTTGGCCTCGACATGTATAACCGCCCTGCAT
CCTCATGGAAGAATCGCTACGAGCTGATTGCGTCGAGCTACAGGAAAACG
GTGATGGCGCGGATAGCGAGGATTTTGCCTGCGTTTGGATTCGGCGGGTT
GGGAAACAAGAGGATTAGGGCTGAGGCACATGCATGGATTAAAAGAATGC
ATCAGCCGAAGCTGAAGGGGGGGAAGGAGCCGGTGGTGGTGTTGGGGAGG
GGGATGCATGTGGATCTAGGGGAGGGGAGACAGGGAGGGATAGGGGGGGG
TGTAGTGCCGATTTTTTCGCCGGGTTTGCTTCCACGGCCGGTCTTGCCGT
CTTTGTTGCCCGTGCCGGCATGGGCGGCGGGCCTTCAATAG back to top
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