Properties
| Property Name | Value |
|---|
| TranscriptId | 578155 |
| Track | FilteredModels2 |
| ProteinId | 578069 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:100745..102171 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1824 ID=mRNA_1824|Name=jgi.p|Nanoce1779_2|578069|organism=Nannochloropsis oceanica|type=mRNA|length=762bp
ACAGGGACAGCACTTACCAATCAACACTTGTCTGATAAGTCCGCAGCCGG
ATACCGACCGCATTTCGTCAACCTCGTTCTCCTTCCTTCTTGGCCTGCGC
GTACATGAACCACGAGCACCATCACCACGACACTCATCGAAATGACAGCG
ACACTTGTCTATCAAGTCCCGGCAGGCGATTTTGGGGCTTATTTACTCGG
GCCCTGGAAGCGCACTCTCGAGTGCCGGGAGTTTGGCAAGACCTACGAGC
ATCAACGGACGTCCAGTTCAGTTGTGGTAATTGAACATGCCATAGGCGTC
GCAGCCGAGCCGCCGACTTATTTTCTCAATTGGAAGTTTGGCCGTTCATT
GGAGAAGGAGGATCTGAAACTTGGCTACTGCATGCACTTTATGCGCGACA
CGGATATAACGAATCTGGAATGGCGGTATGAAGAAAACAAATGCCATGGT
TGGTTCCTGCCGCATATTGCCGTCGCCACCCTCAATTTTCGGACGCCCGA
GCGCTCCACGACGGTGACATACAGGGTAGTGGACGAGGATACCATGGCGG
TCTCCATTGTGGAGGTGGAAAGTCATCGATCCGTTTTACAATACGGACAC
ATGCTGCGCTTGCCAGTGATGGACAGCAATATGAATGTAAGCGGCGTTGG
GAGACGGAGTAGGGGTGGCATGGGTGGAGAGAGATGATGATGATGCTGTG
AGGCGAAAGCAAAGGTATAACGCGACGCTTGACAAAAGAAATATAGATAT
AAACATGCCGCC back to topprotein sequence of jgi.p|Nanoce1779_2|578069 >mRNA_1824-protein ID=mRNA_1824-protein|Name=jgi.p|Nanoce1779_2|578069|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MTATLVYQVPAGDFGAYLLGPWKRTLECREFGKTYEHQRTSSSVVVIEHA
IGVAAEPPTYFLNWKFGRSLEKEDLKLGYCMHFMRDTDITNLEWRYEENK
CHGWFLPHIAVATLNFRTPERSTTVTYRVVDEDTMAVSIVEVESHRSVLQ
YGHMLRLPVMDSNMNVSGVGRRSRGGMGGER* back to topmRNA from alignment at scaffold_4:100745..102171+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1824 ID=mRNA_1824|Name=jgi.p|Nanoce1779_2|578069|organism=Nannochloropsis oceanica|type=mRNA|length=1427bp|location=Sequence derived from alignment at scaffold_4:100745..102171+ (Nannochloropsis oceanica)
ACAGGGACAGCACTTACCAATCAACACTTGTCTGATAAGTCCGCAGCCGG
ATACCGACCGCATTTCGTCAACCTCGTTCTCCTTCCTTCTTGGCCTGCGC
GTACATGAACCACGAGCACCATCACCACGACACTCATCGAAATGACAGCG
ACACTTGTCTATCAAGTCCCGGCAGGCGATTTTGGGGCTTATTTACTCGG
GCCCTGGAAGCGCACTCTCGAGTGCCGGGAGTTTGGCAAGACCTACGAGC
ATCAACGGACGTCCAGTTCAGTTGTGGTAATTGAACATGCCATAGGCGTC
GCAGCCGAGCCGCCGACTTATGTAAGTTATGCATGCATATGTGTAGGCAA
TCATCGAGTGTGAACTTGCGGGAAGACAGGTGCGCGCTTCGCTTCCCGCG
GTAAGTGTGGATGGAGAAATGGGAAAGGGCATGCGACGGAAAGAGAGGTG
ATGGCAGCAATGCGATTTGCCTGTACCCACCAAGCTGTATACGTATGAGG
TTTCTGGATAGATATGCCGCTACGCACCAGGGGAGAATAAAATAATAAGG
TTGAAAAGTAAGACGATAGGGCATATTCAAATTAGTCTCATGGCGGCCAC
TGTGAGTGCTTGGCGCATGGTCTTTTGAAGCACTCTCTCGGCCTGCTTTC
CTTCACACAGCATACTCATGTGCCTGTATTTTATTATTTCGGATGTTGGC
TATTTTGACATGTAGCCAAATATCTGATAACGACGACATTGATACCAAAG
CTTGCAGCAATTGCCACCCAGCCAATTTACCGCACTTTACCCCATCCATT
CACTCTCACTCCTTCTTGACACCCCTACACCCAACAACAGTTTCTCAATT
GGAAGTTTGGCCGTTCATTGGAGAAGGAGGATCTGAAACTTGGCTACTGC
ATGCACTTTATGCGCGACACGGATATAACGAATCTGGAATGGCGGTATGA
AGGTATGTGCACCATGCTGGATAGGCGTATAGGGTCACGCTGATTGAGAG
CAGGAAAGAAAATAGTACAGTGTGGATCAAATCATTTTTCACACGATGTA
CTCATAAAATTTACTCTTTCCTTTTTTTGACCCAATCCTCTTGCCCAGAA
AACAAATGCCATGGTTGGTTCCTGCCGCATATTGCCGTCGCCACCCTCAA
TTTTCGGACGCCCGAGCGCTCCACGACGGTGACATACAGGGTAGTGGACG
AGGATACCATGGCGGTCTCCATTGTGGAGGTGGAAAGTCATCGATCCGTT
TTACAATACGGACACATGCTGCGCTTGCCAGTGATGGACAGCAATATGAA
TGTAAGCGGCGTTGGGAGACGGAGTAGGGGTGGCATGGGTGGAGAGAGAT
GATGATGATGCTGTGAGGCGAAAGCAAAGGTATAACGCGACGCTTGACAA
AAGAAATATAGATATAAACATGCCGCC back to topCoding sequence (CDS) from alignment at scaffold_4:100745..102171+ >mRNA_1824 ID=mRNA_1824|Name=jgi.p|Nanoce1779_2|578069|organism=Nannochloropsis oceanica|type=CDS|length=1638bp|location=Sequence derived from alignment at scaffold_4:100745..102171+ (Nannochloropsis oceanica)
ATGACAGCGACACTTGTCTATCAAGTCCCGGCAGGCGATTTTGGGGCTTA
TTTACTCGGGCCCTGGAAGCGCACTCTCGAGTGCCGGGAGTTTGGCAAGA
CCTACGAGCATCAACGGACGTCCAGTTCAGTTGTGGTAATTGAACATGCC
ATAGGCGTCGCAGCCGAGCCGCCGACTTATTTTCTCAATTGGAAGTTTGG
CCGTTCATTGGAGAAGGAGGATCTGAAACTTGGCTACTGCATGCACTTTA
TGCGCGACACGGATATAACGAATCTGGAATGGCGGTATGAAGAAAACAAA
TGCCATGGTTGGTTCCTGCCGCATATTGCCGTCGCCACCCTCAATTTTCG
GACGCCCGAGCGCTCCACGACGGTGACATACAGGGTAGTGGACGAGGATA
CCATGGCGGTCTCCATTGTGGAGGTGGAAAGTCATCGATCCGTTTTACAA
TACGGACACATGCTGCGCTTGCCAGTGATGGACAGCAATATGAATGTAAG
CGGCGTTGGGAGACGGAGTAGGGGTGGCATGGGTGGAGAGAGATGAATGA
CAGCGACACTTGTCTATCAAGTCCCGGCAGGCGATTTTGGGGCTTATTTA
CTCGGGCCCTGGAAGCGCACTCTCGAGTGCCGGGAGTTTGGCAAGACCTA
CGAGCATCAACGGACGTCCAGTTCAGTTGTGGTAATTGAACATGCCATAG
GCGTCGCAGCCGAGCCGCCGACTTATTTTCTCAATTGGAAGTTTGGCCGT
TCATTGGAGAAGGAGGATCTGAAACTTGGCTACTGCATGCACTTTATGCG
CGACACGGATATAACGAATCTGGAATGGCGGTATGAAGAAAACAAATGCC
ATGGTTGGTTCCTGCCGCATATTGCCGTCGCCACCCTCAATTTTCGGACG
CCCGAGCGCTCCACGACGGTGACATACAGGGTAGTGGACGAGGATACCAT
GGCGGTCTCCATTGTGGAGGTGGAAAGTCATCGATCCGTTTTACAATACG
GACACATGCTGCGCTTGCCAGTGATGGACAGCAATATGAATGTAAGCGGC
GTTGGGAGACGGAGTAGGGGTGGCATGGGTGGAGAGAGATGAATGACAGC
GACACTTGTCTATCAAGTCCCGGCAGGCGATTTTGGGGCTTATTTACTCG
GGCCCTGGAAGCGCACTCTCGAGTGCCGGGAGTTTGGCAAGACCTACGAG
CATCAACGGACGTCCAGTTCAGTTGTGGTAATTGAACATGCCATAGGCGT
CGCAGCCGAGCCGCCGACTTATTTTCTCAATTGGAAGTTTGGCCGTTCAT
TGGAGAAGGAGGATCTGAAACTTGGCTACTGCATGCACTTTATGCGCGAC
ACGGATATAACGAATCTGGAATGGCGGTATGAAGAAAACAAATGCCATGG
TTGGTTCCTGCCGCATATTGCCGTCGCCACCCTCAATTTTCGGACGCCCG
AGCGCTCCACGACGGTGACATACAGGGTAGTGGACGAGGATACCATGGCG
GTCTCCATTGTGGAGGTGGAAAGTCATCGATCCGTTTTACAATACGGACA
CATGCTGCGCTTGCCAGTGATGGACAGCAATATGAATGTAAGCGGCGTTG
GGAGACGGAGTAGGGGTGGCATGGGTGGAGAGAGATGA back to top
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