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Properties
| Property Name | Value |
|---|
| TranscriptId | 573531 |
| Track | FilteredModels2 |
| ProteinId | 573445 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1505588..1506946 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1781 ID=mRNA_1781|Name=jgi.p|Nanoce1779_2|573445|organism=Nannochloropsis oceanica|type=mRNA|length=1359bp
ACGGCCACTCCGCCTTCCATGTCATCCACTTTGCCGGTCTCGACCTTGTC
CTCTCTCCCTCCCTCCCTCCCTCCCTCCCCCGGCATCACCCTATGTACCA
CCAGCTCCAGGGTCGGAGGGTGGACGCGTGGGAGGGGCGGGTGAGCCTGT
CGCCGTCGGATCCACCATTGCACTGGATCGAGACTTTGAGTCAAGTCAGG
GAGGAGGACGTGAGGGAGGCCGAGGCAGGGAGGGAGGAAGAGGCAGCATT
GGTGGCTGCTTTTCAGACCCACCTTCTCCCTGGGGCTCTCCTGGAGAGGG
GGAAGACCTGTTCCCGTCGACAGTACATTTCGTGGCTGCAGCAATTGTGG
GAGGGCGGGATGAAGGGCGGGAGAGAGGGAAGGGAGGACGGACCTCATGA
AGGCTTGCTTCGGCAGTGGGAGCATTTGCGGGTTCGGGTGGAGCATGACA
TCCGCTCGCGTGTGTTGGAGTGCGGGGTTTTGCAGGCGAACTGCACAACG
CTCTCCTCCCCCCACGCCGTGCGGGAGCTGGCGGAGCGCATGGGCCCGGA
GGCGGCCCAGGCGCGGGCGACGTTCAAGATCGAGAGCGAGGCCGTGGCGG
AGCTTCAAGCCTGCTGCATGCACCCTACGGCGTTGGGGCTGAGGAGCGTG
CAAAAACAAGTAGGGGTCAGCAATGGGGAGATGAGGGCGTGTTTGCATCG
ACTATTGGCCTTGCCGACCGGAAGCGGAGGGGGGGGGGCGAGGGAGGGGC
TGAGGGGCCTGGACGTGGTTGTGGGGAGGACGTACGGGGTGACGCGGGAG
GGTGCGGTGATGCTGCCGTGGGACTGGGTTTTGAGGAATGGCGGCGGCGG
GGGTCCATGGGGCGTGTGAGTACAGCGAATACTTCGGGGGTTTGACAGTG
TGCATGTGCACGTGCGTGGGTCAAGGAGAGCGTAACGATATAGCGAGATA
AATCTGGGGGAAAAGCCACATTGGTCGATGAATTGTGGTCCGCGGGCTCG
CTCTTTCGGATGTGGCCCATTCGAATACTATGTTTTGGTGGTTTTCATTT
TTCTATTTTTCTGCCATCATTTGGTCGTGTTTTCAGTGTCCTAAATCAAG
TCATGGACCACTTCTCGCTCCAACGACGAATTTGTCAATTTCTTCATTCG
TTTCGTCACCCCTCTCACGTCCCCCTCCCTGCCTTTATTCCCCTTCCTCT
TCTAGACCGCCACCACCTCTACCTCTTGCACAGCTTCTTTGTCTGGCCCC
TCCTTCTCCTCTTCCTCTCCTTCCAATCCACCGACCTCTTCCTCTTTCCC
TTCTTTCTCAGGTGCCAGCACCACCGCCTCCCACCTATCTTTTACCCCCC
CCCCCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|573445 >mRNA_1781-protein ID=mRNA_1781-protein|Name=jgi.p|Nanoce1779_2|573445|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MYHQLQGRRVDAWEGRVSLSPSDPPLHWIETLSQVREEDVREAEAGREEE
AALVAAFQTHLLPGALLERGKTCSRRQYISWLQQLWEGGMKGGREGREDG
PHEGLLRQWEHLRVRVEHDIRSRVLECGVLQANCTTLSSPHAVRELAERM
GPEAAQARATFKIESEAVAELQACCMHPTALGLRSVQKQVGVSNGEMRAC
LHRLLALPTGSGGGGAREGLRGLDVVVGRTYGVTREGAVMLPWDWVLRNG
GGGGPWGV* back to topmRNA from alignment at scaffold_1:1505588..1506946- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1781 ID=mRNA_1781|Name=jgi.p|Nanoce1779_2|573445|organism=Nannochloropsis oceanica|type=mRNA|length=1359bp|location=Sequence derived from alignment at scaffold_1:1505588..1506946- (Nannochloropsis oceanica)
ACGGCCACTCCGCCTTCCATGTCATCCACTTTGCCGGTCTCGACCTTGTC
CTCTCTCCCTCCCTCCCTCCCTCCCTCCCCCGGCATCACCCTATGTACCA
CCAGCTCCAGGGTCGGAGGGTGGACGCGTGGGAGGGGCGGGTGAGCCTGT
CGCCGTCGGATCCACCATTGCACTGGATCGAGACTTTGAGTCAAGTCAGG
GAGGAGGACGTGAGGGAGGCCGAGGCAGGGAGGGAGGAAGAGGCAGCATT
GGTGGCTGCTTTTCAGACCCACCTTCTCCCTGGGGCTCTCCTGGAGAGGG
GGAAGACCTGTTCCCGTCGACAGTACATTTCGTGGCTGCAGCAATTGTGG
GAGGGCGGGATGAAGGGCGGGAGAGAGGGAAGGGAGGACGGACCTCATGA
AGGCTTGCTTCGGCAGTGGGAGCATTTGCGGGTTCGGGTGGAGCATGACA
TCCGCTCGCGTGTGTTGGAGTGCGGGGTTTTGCAGGCGAACTGCACAACG
CTCTCCTCCCCCCACGCCGTGCGGGAGCTGGCGGAGCGCATGGGCCCGGA
GGCGGCCCAGGCGCGGGCGACGTTCAAGATCGAGAGCGAGGCCGTGGCGG
AGCTTCAAGCCTGCTGCATGCACCCTACGGCGTTGGGGCTGAGGAGCGTG
CAAAAACAAGTAGGGGTCAGCAATGGGGAGATGAGGGCGTGTTTGCATCG
ACTATTGGCCTTGCCGACCGGAAGCGGAGGGGGGGGGGCGAGGGAGGGGC
TGAGGGGCCTGGACGTGGTTGTGGGGAGGACGTACGGGGTGACGCGGGAG
GGTGCGGTGATGCTGCCGTGGGACTGGGTTTTGAGGAATGGCGGCGGCGG
GGGTCCATGGGGCGTGTGAGTACAGCGAATACTTCGGGGGTTTGACAGTG
TGCATGTGCACGTGCGTGGGTCAAGGAGAGCGTAACGATATAGCGAGATA
AATCTGGGGGAAAAGCCACATTGGTCGATGAATTGTGGTCCGCGGGCTCG
CTCTTTCGGATGTGGCCCATTCGAATACTATGTTTTGGTGGTTTTCATTT
TTCTATTTTTCTGCCATCATTTGGTCGTGTTTTCAGTGTCCTAAATCAAG
TCATGGACCACTTCTCGCTCCAACGACGAATTTGTCAATTTCTTCATTCG
TTTCGTCACCCCTCTCACGTCCCCCTCCCTGCCTTTATTCCCCTTCCTCT
TCTAGACCGCCACCACCTCTACCTCTTGCACAGCTTCTTTGTCTGGCCCC
TCCTTCTCCTCTTCCTCTCCTTCCAATCCACCGACCTCTTCCTCTTTCCC
TTCTTTCTCAGGTGCCAGCACCACCGCCTCCCACCTATCTTTTACCCCCC
CCCCCCCCC back to topCoding sequence (CDS) from alignment at scaffold_1:1505588..1506946- >mRNA_1781 ID=mRNA_1781|Name=jgi.p|Nanoce1779_2|573445|organism=Nannochloropsis oceanica|type=CDS|length=777bp|location=Sequence derived from alignment at scaffold_1:1505588..1506946- (Nannochloropsis oceanica)
ATGTACCACCAGCTCCAGGGTCGGAGGGTGGACGCGTGGGAGGGGCGGGT
GAGCCTGTCGCCGTCGGATCCACCATTGCACTGGATCGAGACTTTGAGTC
AAGTCAGGGAGGAGGACGTGAGGGAGGCCGAGGCAGGGAGGGAGGAAGAG
GCAGCATTGGTGGCTGCTTTTCAGACCCACCTTCTCCCTGGGGCTCTCCT
GGAGAGGGGGAAGACCTGTTCCCGTCGACAGTACATTTCGTGGCTGCAGC
AATTGTGGGAGGGCGGGATGAAGGGCGGGAGAGAGGGAAGGGAGGACGGA
CCTCATGAAGGCTTGCTTCGGCAGTGGGAGCATTTGCGGGTTCGGGTGGA
GCATGACATCCGCTCGCGTGTGTTGGAGTGCGGGGTTTTGCAGGCGAACT
GCACAACGCTCTCCTCCCCCCACGCCGTGCGGGAGCTGGCGGAGCGCATG
GGCCCGGAGGCGGCCCAGGCGCGGGCGACGTTCAAGATCGAGAGCGAGGC
CGTGGCGGAGCTTCAAGCCTGCTGCATGCACCCTACGGCGTTGGGGCTGA
GGAGCGTGCAAAAACAAGTAGGGGTCAGCAATGGGGAGATGAGGGCGTGT
TTGCATCGACTATTGGCCTTGCCGACCGGAAGCGGAGGGGGGGGGGCGAG
GGAGGGGCTGAGGGGCCTGGACGTGGTTGTGGGGAGGACGTACGGGGTGA
CGCGGGAGGGTGCGGTGATGCTGCCGTGGGACTGGGTTTTGAGGAATGGC
GGCGGCGGGGGTCCATGGGGCGTGTGA back to top
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