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Properties
| Property Name | Value |
|---|
| TranscriptId | 573354 |
| Track | FilteredModels2 |
| ProteinId | 573268 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1359377..1360659 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1734 ID=mRNA_1734|Name=jgi.p|Nanoce1779_2|573268|organism=Nannochloropsis oceanica|type=mRNA|length=1283bp
GAGGAGGAGGAGGAGGAGGAGGAATGAATGGAGAAGCAGGAGAGGAAGGC
CACCTCCTCCTCCACGTCAAAGTGCCCGTGGCCAGCGAGTGGAAAGGGGC
AGGCGAAAAATTGGAGGGTGCGAAGGAGGGCGAAAAGGAGGGCGGGAGGG
AGGAGTGGCAATGGTACATCTTGAATGACTTTTTGGTCGCTCCGACGATC
TTAGAAGACGCATTGGGCTTTTTGCCTACGTGGAAGGAACCGTGTATTCT
CCTTTATAGGGACCGAGAAACATCGCCGGCAGCACATGCAGCATGGCTTG
AGCAGCTGCGGAAGGCAGGAGCAAGGATGGGTGGTGGCATGGAGGGAGAG
GAAAGAGAAGCAGGTGGTGTTGCTACAGCAGCAGCAACAGCAAAAGCAGC
AGCAACACCTGCAGCAGTAATGCCCTCTATCCCGGTCTCGGTCTTTTCTT
CCCCTTCCATTTCCACTGCTCCTCCGCGCTCTCTGTCCTTTACCCCCCTT
CCTCCCTCACAGATGCCGGGGAGAGGGGACGTGATCGGTATCGACGCGGA
GTTCGTCCAACTGGAGATGGAGATGGCATCTATTCGTGAGGATGGCACTC
GCGTCGTTTCGAAAGAGGGCCGACAAGCGCTGGCTCGTCTGTCGATATTA
GACGCACGGGAGGACATCGTAATGATGGATGATTACGTCTTGCCCTCTGA
GCCGGTCATGGATTACCTAACGCGATTTTCGGGTTTGACGAGGGAGGACC
TGGACCCATCTCTCTGTCGGCATCACCTTGTCTCGGCCCGGACTGCGTAT
TTGAAACTGCGATATTTGATCGATCGGGGCGTGGTCTTGGTCGGGCACGG
CCTGAAGAAAGACTTCCGGATTATCAATGTCTATGTACCACCGGCCCAGG
TGATTGATACGGTGGACCTGTGGTGCTTGGAGGGCCAGAGGAAGATCAGT
CTAAGATTCCTGGCTGCCTTCTTGTTGAAGGAAAACATTCAGGGGGAGAC
GCACGACTCGATTGAGGATGCGCGGACGGCCTTGAGATTATGGAGGAAGT
GGGAGGAGGTGCGGAGGGAGGGGAAGGTGGAGCTGGTTTTGAACGCGTTG
TATGAGTACGGCCGGAAGACGGGATGGAAGCTGCAGCAGGATCAAGAGCA
GGAGCAGGAGCAGCAGCTGTGATGGGGAGGGAGCGAGGCAGGAGGGAAGG
AGGGAGGCATGTAAAGCATTTGAGAAATGCCTAGCTTTAATGAATGCTTA
CCCTTACCCACGCACCCGCATAAGCAGTATGGC back to topprotein sequence of jgi.p|Nanoce1779_2|573268 >mRNA_1734-protein ID=mRNA_1734-protein|Name=jgi.p|Nanoce1779_2|573268|organism=Nannochloropsis oceanica|type=polypeptide|length=383bp
MNGEAGEEGHLLLHVKVPVASEWKGAGEKLEGAKEGEKEGGREEWQWYIL
NDFLVAPTILEDALGFLPTWKEPCILLYRDRETSPAAHAAWLEQLRKAGA
RMGGGMEGEEREAGGVATAAATAKAAATPAAVMPSIPVSVFSSPSISTAP
PRSLSFTPLPPSQMPGRGDVIGIDAEFVQLEMEMASIREDGTRVVSKEGR
QALARLSILDAREDIVMMDDYVLPSEPVMDYLTRFSGLTREDLDPSLCRH
HLVSARTAYLKLRYLIDRGVVLVGHGLKKDFRIINVYVPPAQVIDTVDLW
CLEGQRKISLRFLAAFLLKENIQGETHDSIEDARTALRLWRKWEEVRREG
KVELVLNALYEYGRKTGWKLQQDQEQEQEQQL* back to topmRNA from alignment at scaffold_1:1359377..1360659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1734 ID=mRNA_1734|Name=jgi.p|Nanoce1779_2|573268|organism=Nannochloropsis oceanica|type=mRNA|length=1283bp|location=Sequence derived from alignment at scaffold_1:1359377..1360659- (Nannochloropsis oceanica)
GAGGAGGAGGAGGAGGAGGAGGAATGAATGGAGAAGCAGGAGAGGAAGGC
CACCTCCTCCTCCACGTCAAAGTGCCCGTGGCCAGCGAGTGGAAAGGGGC
AGGCGAAAAATTGGAGGGTGCGAAGGAGGGCGAAAAGGAGGGCGGGAGGG
AGGAGTGGCAATGGTACATCTTGAATGACTTTTTGGTCGCTCCGACGATC
TTAGAAGACGCATTGGGCTTTTTGCCTACGTGGAAGGAACCGTGTATTCT
CCTTTATAGGGACCGAGAAACATCGCCGGCAGCACATGCAGCATGGCTTG
AGCAGCTGCGGAAGGCAGGAGCAAGGATGGGTGGTGGCATGGAGGGAGAG
GAAAGAGAAGCAGGTGGTGTTGCTACAGCAGCAGCAACAGCAAAAGCAGC
AGCAACACCTGCAGCAGTAATGCCCTCTATCCCGGTCTCGGTCTTTTCTT
CCCCTTCCATTTCCACTGCTCCTCCGCGCTCTCTGTCCTTTACCCCCCTT
CCTCCCTCACAGATGCCGGGGAGAGGGGACGTGATCGGTATCGACGCGGA
GTTCGTCCAACTGGAGATGGAGATGGCATCTATTCGTGAGGATGGCACTC
GCGTCGTTTCGAAAGAGGGCCGACAAGCGCTGGCTCGTCTGTCGATATTA
GACGCACGGGAGGACATCGTAATGATGGATGATTACGTCTTGCCCTCTGA
GCCGGTCATGGATTACCTAACGCGATTTTCGGGTTTGACGAGGGAGGACC
TGGACCCATCTCTCTGTCGGCATCACCTTGTCTCGGCCCGGACTGCGTAT
TTGAAACTGCGATATTTGATCGATCGGGGCGTGGTCTTGGTCGGGCACGG
CCTGAAGAAAGACTTCCGGATTATCAATGTCTATGTACCACCGGCCCAGG
TGATTGATACGGTGGACCTGTGGTGCTTGGAGGGCCAGAGGAAGATCAGT
CTAAGATTCCTGGCTGCCTTCTTGTTGAAGGAAAACATTCAGGGGGAGAC
GCACGACTCGATTGAGGATGCGCGGACGGCCTTGAGATTATGGAGGAAGT
GGGAGGAGGTGCGGAGGGAGGGGAAGGTGGAGCTGGTTTTGAACGCGTTG
TATGAGTACGGCCGGAAGACGGGATGGAAGCTGCAGCAGGATCAAGAGCA
GGAGCAGGAGCAGCAGCTGTGATGGGGAGGGAGCGAGGCAGGAGGGAAGG
AGGGAGGCATGTAAAGCATTTGAGAAATGCCTAGCTTTAATGAATGCTTA
CCCTTACCCACGCACCCGCATAAGCAGTATGGC back to topCoding sequence (CDS) from alignment at scaffold_1:1359377..1360659- >mRNA_1734 ID=mRNA_1734|Name=jgi.p|Nanoce1779_2|573268|organism=Nannochloropsis oceanica|type=CDS|length=1149bp|location=Sequence derived from alignment at scaffold_1:1359377..1360659- (Nannochloropsis oceanica)
ATGAATGGAGAAGCAGGAGAGGAAGGCCACCTCCTCCTCCACGTCAAAGT
GCCCGTGGCCAGCGAGTGGAAAGGGGCAGGCGAAAAATTGGAGGGTGCGA
AGGAGGGCGAAAAGGAGGGCGGGAGGGAGGAGTGGCAATGGTACATCTTG
AATGACTTTTTGGTCGCTCCGACGATCTTAGAAGACGCATTGGGCTTTTT
GCCTACGTGGAAGGAACCGTGTATTCTCCTTTATAGGGACCGAGAAACAT
CGCCGGCAGCACATGCAGCATGGCTTGAGCAGCTGCGGAAGGCAGGAGCA
AGGATGGGTGGTGGCATGGAGGGAGAGGAAAGAGAAGCAGGTGGTGTTGC
TACAGCAGCAGCAACAGCAAAAGCAGCAGCAACACCTGCAGCAGTAATGC
CCTCTATCCCGGTCTCGGTCTTTTCTTCCCCTTCCATTTCCACTGCTCCT
CCGCGCTCTCTGTCCTTTACCCCCCTTCCTCCCTCACAGATGCCGGGGAG
AGGGGACGTGATCGGTATCGACGCGGAGTTCGTCCAACTGGAGATGGAGA
TGGCATCTATTCGTGAGGATGGCACTCGCGTCGTTTCGAAAGAGGGCCGA
CAAGCGCTGGCTCGTCTGTCGATATTAGACGCACGGGAGGACATCGTAAT
GATGGATGATTACGTCTTGCCCTCTGAGCCGGTCATGGATTACCTAACGC
GATTTTCGGGTTTGACGAGGGAGGACCTGGACCCATCTCTCTGTCGGCAT
CACCTTGTCTCGGCCCGGACTGCGTATTTGAAACTGCGATATTTGATCGA
TCGGGGCGTGGTCTTGGTCGGGCACGGCCTGAAGAAAGACTTCCGGATTA
TCAATGTCTATGTACCACCGGCCCAGGTGATTGATACGGTGGACCTGTGG
TGCTTGGAGGGCCAGAGGAAGATCAGTCTAAGATTCCTGGCTGCCTTCTT
GTTGAAGGAAAACATTCAGGGGGAGACGCACGACTCGATTGAGGATGCGC
GGACGGCCTTGAGATTATGGAGGAAGTGGGAGGAGGTGCGGAGGGAGGGG
AAGGTGGAGCTGGTTTTGAACGCGTTGTATGAGTACGGCCGGAAGACGGG
ATGGAAGCTGCAGCAGGATCAAGAGCAGGAGCAGGAGCAGCAGCTGTGA back to top
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