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Properties
| Property Name | Value |
|---|
| TranscriptId | 667682 |
| Track | FilteredModels2 |
| ProteinId | 667596 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1308875..1310158 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1716 ID=mRNA_1716|Name=jgi.p|Nanoce1779_2|667596|organism=Nannochloropsis oceanica|type=mRNA|length=699bp
ATGGCCGACGCCGCCAAGGTGGAGGAGCGGGAAGGTTTCCCGGGGCAGGT
GCCAGCCCCAGCCACCCAGTTGCCTCCCCACCAGCAGGAGGAGCAAGCCA
CGGGCGTCAAGCCCCAAGAGCCTCTTCCCGTTAACTTTTTGCGCTGGCCC
TTGGTCGTCCTCCTCTTCTCGTACATAATCCTGCTCTACGTGCGCGACGC
AACGACGGCAGCAACCAGCACCAAAAAGGAAGCCTTGGGAGTTGTTCCTT
CCCCCCAGTCCCCGCCCCACATCATGGGGCAAGCACCGAGTGACCCCGAG
CAAACGTTCGTTATCCACGGGGAGAACTACCCACCTCCCCCTTACGCTAT
TTTTCTGGCCACGATAATGAGCTATGTTCAGGTAGCCGTGTTTATGCTCA
TGGTCACTGGTCGGGTCGTCTTCCGTCTGCTGGGTGCAGAGCCGCCAGCA
TGGTTTGAGAACATGATGAATAACAAGATCCAAACCTTTGCCATCATTCT
CCTCGGCAACACCGCCGCTGCCTCCCTGGCTGCCACCGGTGCCTTCGAAA
TAACTTATTTCGGTCCTCCGGTTGGGGGGAGGGAAGGAGGGAGGGAGGGA
GGGATGGTAGCTCATCTGGTGTTTTCCAAGCTGGCGACGGGAGGGATGCC
GAATGGGCATGAGATTTTGAGGAGGTTGAGGGAGTTGGGGGTGGAGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|667596 >mRNA_1716-protein ID=mRNA_1716-protein|Name=jgi.p|Nanoce1779_2|667596|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MADAAKVEEREGFPGQVPAPATQLPPHQQEEQATGVKPQEPLPVNFLRWP
LVVLLFSYIILLYVRDATTAATSTKKEALGVVPSPQSPPHIMGQAPSDPE
QTFVIHGENYPPPPYAIFLATIMSYVQVAVFMLMVTGRVVFRLLGAEPPA
WFENMMNNKIQTFAIILLGNTAAASLAATGAFEITYFGPPVGGREGGREG
GMVAHLVFSKLATGGMPNGHEILRRLRELGVE* back to topmRNA from alignment at scaffold_1:1308875..1310158- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1716 ID=mRNA_1716|Name=jgi.p|Nanoce1779_2|667596|organism=Nannochloropsis oceanica|type=mRNA|length=1284bp|location=Sequence derived from alignment at scaffold_1:1308875..1310158- (Nannochloropsis oceanica)
ATGGCCGACGCCGCCAAGGTGGAGGAGCGGGAAGGTTTCCCGGGGCAGGT
GCCAGCCCCAGCCACCCAGTTGCCTCCCCACCAGCAGGAGGAGCAAGCCA
CGGGCGTCAAGCCCCAAGAGCCTCTTCCCGTTAACTTTTTGCGCTGGCCC
TTGGTCGTCCTCCTCTTCTCGTACATAATCCTGCTCTACGTGCGCGACGC
AACGACGGCAGCAACCAGCACCAAAAAGGAAGCCTTGGGAGTTGTTCCTT
CCCCCCAGTCCCCGCCCCACATCATGGGGCAAGCACCGGTGGGGATCCAT
CCAGAGCGCACCGCCCCCATTTCCCAAGATGGCACTGAAAGGCTTCCTTC
ACCTTCTTCTTCCTCTTCTTCTCCTTCTTTAATGTTTCCGATTGCGGGAG
GAGGCAAAAACTTTCGTCAACACCCGCACATTCTGGTGCAGTATTGTACA
AGCTGAGGTAATTAGAAAAAGGAGGGTGGAGAGGAGGGAGAGGGAAGAAG
CTGGAAGATACAAGATAAAATAGTTCACGCTTGCTTCTTTTCGTTCTTGT
CTCGCAACTAAAGGTGGCGACTTTATTTTTACTTTGTCCATCTATCGATT
CCTGACTGCGTGTGCACAGGTTACCGGGGGAGCTTTGTGCAGCTTTCAAA
GTTCCTCCGTCACCACCTGCCGTCCCTCGTCCCCTCCTTCCCCCCATCCT
CCTCCGTGTCCTCCTCCGCCTCCTCCTCCTCTTCCTCCTTTAAGAGTGAC
CCCGAGCAAACGTTCGTTATCCACGGGGAGAACTACCCACCTCCCCCTTA
CGCTATTTTTCTGGCCACGATAATGAGCTATGTTCAGGTAGCCGTGTTTA
TGCTCATGGTCACTGGTCGGGTCGTCTTCCGTCTGCTGGGTGCAGAGCCG
CCAGCATGGTTTGAGAACATGATGAATAACAAGGTTCGAAAGGATGCGGA
TCTGCACGACATGCATGGTGCATCAGCTTTCCCACCCTTCTTCCTTTGGA
TAGTAATCATAACCCTCCCTCCTTCCCCCCCTCCTTCCCTCTCTCCTTCC
CCCCCTCCTAAGATCCAAACCTTTGCCATCATTCTCCTCGGCAACACCGC
CGCTGCCTCCCTGGCTGCCACCGGTGCCTTCGAAATAACTTATTTCGGTC
CTCCGGTTGGGGGGAGGGAAGGAGGGAGGGAGGGAGGGATGGTAGCTCAT
CTGGTGTTTTCCAAGCTGGCGACGGGAGGGATGCCGAATGGGCATGAGAT
TTTGAGGAGGTTGAGGGAGTTGGGGGTGGAGTAG back to topCoding sequence (CDS) from alignment at scaffold_1:1308875..1310158- >mRNA_1716 ID=mRNA_1716|Name=jgi.p|Nanoce1779_2|667596|organism=Nannochloropsis oceanica|type=CDS|length=2097bp|location=Sequence derived from alignment at scaffold_1:1308875..1310158- (Nannochloropsis oceanica)
ATCCAAACCTTTGCCATCATTCTCCTCGGCAACACCGCCGCTGCCTCCCT
GGCTGCCACCGGTGCCTTCGAAATAACTTATTTCGGTCCTCCGGTTGGGG
GGAGGGAAGGAGGGAGGGAGGGAGGGATGGTAGCTCATCTGGTGTTTTCC
AAGCTGGCGACGGGAGGGATGCCGAATGGGCATGAGATTTTGAGGAGGTT
GAGGGAGTTGGGGGTGGAGTAGAGTGACCCCGAGCAAACGTTCGTTATCC
ACGGGGAGAACTACCCACCTCCCCCTTACGCTATTTTTCTGGCCACGATA
ATGAGCTATGTTCAGGTAGCCGTGTTTATGCTCATGGTCACTGGTCGGGT
CGTCTTCCGTCTGCTGGGTGCAGAGCCGCCAGCATGGTTTGAGAACATGA
TGAATAACAAGATGGCCGACGCCGCCAAGGTGGAGGAGCGGGAAGGTTTC
CCGGGGCAGGTGCCAGCCCCAGCCACCCAGTTGCCTCCCCACCAGCAGGA
GGAGCAAGCCACGGGCGTCAAGCCCCAAGAGCCTCTTCCCGTTAACTTTT
TGCGCTGGCCCTTGGTCGTCCTCCTCTTCTCGTACATAATCCTGCTCTAC
GTGCGCGACGCAACGACGGCAGCAACCAGCACCAAAAAGGAAGCCTTGGG
AGTTGTTCCTTCCCCCCAGTCCCCGCCCCACATCATGGGGCAAGCACCGA
TCCAAACCTTTGCCATCATTCTCCTCGGCAACACCGCCGCTGCCTCCCTG
GCTGCCACCGGTGCCTTCGAAATAACTTATTTCGGTCCTCCGGTTGGGGG
GAGGGAAGGAGGGAGGGAGGGAGGGATGGTAGCTCATCTGGTGTTTTCCA
AGCTGGCGACGGGAGGGATGCCGAATGGGCATGAGATTTTGAGGAGGTTG
AGGGAGTTGGGGGTGGAGTAGAGTGACCCCGAGCAAACGTTCGTTATCCA
CGGGGAGAACTACCCACCTCCCCCTTACGCTATTTTTCTGGCCACGATAA
TGAGCTATGTTCAGGTAGCCGTGTTTATGCTCATGGTCACTGGTCGGGTC
GTCTTCCGTCTGCTGGGTGCAGAGCCGCCAGCATGGTTTGAGAACATGAT
GAATAACAAGATGGCCGACGCCGCCAAGGTGGAGGAGCGGGAAGGTTTCC
CGGGGCAGGTGCCAGCCCCAGCCACCCAGTTGCCTCCCCACCAGCAGGAG
GAGCAAGCCACGGGCGTCAAGCCCCAAGAGCCTCTTCCCGTTAACTTTTT
GCGCTGGCCCTTGGTCGTCCTCCTCTTCTCGTACATAATCCTGCTCTACG
TGCGCGACGCAACGACGGCAGCAACCAGCACCAAAAAGGAAGCCTTGGGA
GTTGTTCCTTCCCCCCAGTCCCCGCCCCACATCATGGGGCAAGCACCGAT
CCAAACCTTTGCCATCATTCTCCTCGGCAACACCGCCGCTGCCTCCCTGG
CTGCCACCGGTGCCTTCGAAATAACTTATTTCGGTCCTCCGGTTGGGGGG
AGGGAAGGAGGGAGGGAGGGAGGGATGGTAGCTCATCTGGTGTTTTCCAA
GCTGGCGACGGGAGGGATGCCGAATGGGCATGAGATTTTGAGGAGGTTGA
GGGAGTTGGGGGTGGAGTAGAGTGACCCCGAGCAAACGTTCGTTATCCAC
GGGGAGAACTACCCACCTCCCCCTTACGCTATTTTTCTGGCCACGATAAT
GAGCTATGTTCAGGTAGCCGTGTTTATGCTCATGGTCACTGGTCGGGTCG
TCTTCCGTCTGCTGGGTGCAGAGCCGCCAGCATGGTTTGAGAACATGATG
AATAACAAGATGGCCGACGCCGCCAAGGTGGAGGAGCGGGAAGGTTTCCC
GGGGCAGGTGCCAGCCCCAGCCACCCAGTTGCCTCCCCACCAGCAGGAGG
AGCAAGCCACGGGCGTCAAGCCCCAAGAGCCTCTTCCCGTTAACTTTTTG
CGCTGGCCCTTGGTCGTCCTCCTCTTCTCGTACATAATCCTGCTCTACGT
GCGCGACGCAACGACGGCAGCAACCAGCACCAAAAAGGAAGCCTTGGGAG
TTGTTCCTTCCCCCCAGTCCCCGCCCCACATCATGGGGCAAGCACCG back to top
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