jgi.p|Nanoce1779_2|667581, mRNA_1699 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|667581
Unique Name	mRNA_1699
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5216
Alignment location	scaffold_1:1270445..1275660 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	667667
Track	FilteredModels2
ProteinId	667581

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_1	supercontig	scaffold_1:1270445..1275660 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|667581	gene_1699	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|667581	mRNA_1699-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1699	CDS_1699	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_1:1270445..1275660-
coding sequence from alignment at scaffold_1:1270445..1275660-

mRNA sequence

>mRNA_1699 ID=mRNA_1699|Name=jgi.p|Nanoce1779_2|667581|organism=Nannochloropsis oceanica|type=mRNA|length=5216bp
GGTGATTTCATGATAAAGGTCGCCTTGGGTCGTCTTAGCACCCACAGTGC
TGCAGTGCTGTCATGTCTTCTAGTTTATGATCTTTTTTTTATTGTCATTC
AGGTATGGTATGCTGTGAGTGAGTGCATTTTTGTCTTTTCGACCTACGTT
GCCTTTGTGTCTAATCATTTCACGAATCATCTGTCTTAGTATATTTCCCG
TCCTCTCATTCCTCTTCCTCTGGCAGCTCCCTCCGACACTACAACACTCC
ACAATCTAGAACATGGGAATTGGAGGATATTTTTCCTGTCTCCTTTTCGC
CGCCCGGGCCATGCCTTGTGCAGCGTGGACTGTCTGCAAGTAGTTTACGT
ACAACACAGCCGCCTTGAGTACCACCTTCTTCCACCATGACTTCCTCAGG
AACCGGCTCCTCCCCATCTCCAACTCTTCCTCCCCTGGAAAAAGAACCTC
CACCTCCATCCTCCGATCCGCCACTTCCAAGTCCATCTCATCCTTCAACC
GTTCTAACGCCCATTCCCACTCCCACCCCTGCATCCTTCCCTTCCTCCGC
CCTACGGAAGCTGGAACAGCTGCTTCGGCCGCTTTTTGGAAGGCGGTGCT
CACGTCTTTTGTTATGGACGTCGCCTCCTTGTCCAAGGCACGTACAGGGA
GAAAGAGGCCAGTAAAACGGTCTTGGAATTTTGCAAAGTAATACTCGTTC
AGGGCGTCGAGGTGTTGGCGGAAGGAGGGAGCAAGTCGGCGCGTGAGTGC
GGCAATGACATCAGATTCCGCGGTCGTGGCAGCAGCAGCAGCAGCAGCAG
CAGAGGGAGGAAGGCGGACCGAGAGCGATTTGAGTGAGGAGGTAATGATG
CTGTCGGCGTCGCGGCCGTATTCTAAAATGGGCATCTCACTGGCAGCTGC
CTCTACCTTATGCCCCAATCTCTCGATGCGTTTCTCCGCCTCCTGGACAA
TGCTTTCCACCACCTTCCGACGAATGAAGGCTTGGATCTCTTCTTCGTCC
GTTCCTCGCTTTGAGGGGGACGGGAGGGAGGCAGGGCTGTCTCCAACCAT
CCCTCCGGCACTTTCCTGGATGATGGAGGCCCAGAGCTCAGCGGCGAAGG
CGGGGAATTCGGAAAGAGGTACCGGTTGGAAGAGCTGCGTGGGTGCTTCT
GACCAGGAGGACGGCTTCTTCGTCTTGATTGTTGACAATTCAGCTCTTCC
GATCCCTGTTGCGTTTGCTGACGATTCTCGGTCAAAGAGCAGGAGAGTGC
GTCGAAGCTCTTGCACTGCCTCTTCGAACGCACTTGGCTGGAATTCTCTG
GAAGGCATTGCTACCACCCGTACGTCCAACCCCCCTTCCTCTGCTTTCCC
TCCCTCCTTCTTCGTCGTGGTCGATTTCTTCGATCCTTTCACTAAAGAGG
CGGAAAAGGAGGAGAAGGAAGAGGAGGAGGAAGGGGGGGGGTGTCCCAGA
GCAGCGTAAGCCTCTTCAAGGCAGCGCGTGACGATGCCCAGGGCCCCCGC
CGCGTCTCCATCCAGCTGCTCTGAGTCCCTCAAGACCACCACCAACGCCT
TCCTCCTCTTGGTCAGTCTAGAGACAGTGGTCTTCGTCGTGGTTGTTGTT
GCTACTGTCTTTCCCTGATTCTCTTTCTCTTCTTTCTTTTTCTTTCCTCC
TTCACTCGCCCTTCCACTCGAGCTCCTCGTCGTCACCGTCGTCGTCCGCT
CGATCAATGTCTGCAGCAACGATGCATGCAGCTCCCCTCCCATCCGGCCC
CCTCTAATATCCCTCGCCCATACATTTAAAATGATAACGTCGGCGGCCGT
TACTGCTAGCGCGGAGAGCTGCCGATCGAAGAGGTCGCTCCCCTCCCCAC
GTGCCACGCTTTCCAACCCTTCCGTGTCCAGGACCACCAGCGGTCTTTGA
CTTTGGCAAGCAGACGATAAGGTTGCTGTTGGACTGCTACTACTGCTGGC
ACTGTTGCAGCTACTCCCTTTCTCGCTGCCAAGGTCAACCCAAACGCCCC
TCGTCGTCCTCCTTCCCGCCCCTGCATCCCTCACATTAAGCACCGGAAAC
CTTGTTCCAAACAAAGCATTCAATAAGGTGGATTTCCCACTTGCTTGTGG
GCCAACAATGGCCACCACGCCATATTGCAATGCGGTGTACAACTCCTCCT
CCTCTGCAAAACTCTGTATGCCTTGTGTCCGCCAGGTTGCTTGCTTCTTT
TCCTCCTCCTCCCCCTCCTCCTCCTGCTGATCCTCCACGTCCGCCTCTTC
GAGGTGGCATTCGTGCGTCACCATTGACTGAAAGCGTTCTCCGATGGTAA
AAAAAAAATGTGCCTCATTTTCCTCCTCTTTCCTTTGTCGAGCAGGGGTT
GGATGGGCGGGAGGCGGACTGCTGCTGCTCTTACTGGACCCTACCCCCCC
CCCTCGCGCTGCGTGCAAGGAACATGGGCGGCTCTGAGGGCCCCACAGCT
TAGAGGAGGGTGCGCTTAAGGTAGCAACGGTGGTTGTGGGTCGCAGGAGG
GTAACGACCAGCTCGAGGAGTAAGGTTGCAGTGATGATGAGGGATAGACA
GCTACTGGTGGGGAGGCTAGGCAACGTCCTTGGTCTCCTTGGATGGCTGA
GCTGTATTGGTGGCGTCAGCCGCTTCCTCGTCATGACTGCAAGTGTCCTA
CGTGATGATATGGGTTTAAAAAGATGGAATGAGAGTGAGGGAAGGAGTAC
GCAGACACATTCTATGCGGCTCCAGGTTACAAGTCGCCCTCCCTGAGGGG
CTTGTCGGCAGCCATTTGCTTCCGCTGCTTTTTCCCACTCCCGTCGTCGA
CCGCCTCAGTGATCGTGGGCATAGTCGTGGGACCAGGGTTAGGCAAATTG
GGGGAGGCAACAGGCTGTGTAGATAAACGAGATTTATCGATACAGCAGCG
GCGCGATTGAAAACGGCTATCTGTGGTTGAGGGATGGTTTGGTTCGGTTT
TATTTGGTACTACTCTTAATACTGGTGCCGCCTCTCTCATTCTTCTCACC
CTCAACCTTCTATGTATCTGGACACATAGGCTCCACGTCGTGGAGAACTG
TGAAACAACACATTCGGCCCCTTCCCCTCCTCCCTTTTTTTCTCAAAAAA
GCGACGGATGGGTACTGCACGTTTGCCTCACGCAAATCAACCCTCTCGGT
TGCGTGTGGCTTCCGGACAGCGTGACAGAGTGCTGTACCCACTCCCTAGC
ATCTGTCCAATAAGAGACATGATTTCAAGCATAAAATATTGTAACACTCA
AAGTTCCTTCCCTTGATAAAATCCCTCTTCAGGCAAGGAGAGCTGCAACT
CAGCCAAGCAGGGTGCTCCTCCTCACCCTCAAGACACAATGAGCAGCGAC
GCTCCAAGCCCACCCCCACTCCCACCACTACGAGTCAGACGACGGTTAGC
TCTGGGCACGGTGGCACTCTTGCTGGGCAGCATGTTAGCGACGGTAGGCG
CAGTAGCAGGTGGAGTAGCAGGCGGAATAGGGAGGGGGAGGCTAGCAACA
CGACCAGGAGGTCGGCAGCACCCGCTGCCGTCATGGATGCGCATGGGACG
AGGACAAGGAGCGTCAAAGATGGCGCATATCCGCAGTAGTAGAAGTAGAA
GTAGTAGAAGTAGTAGTAGTAGCAGCAGCAGCAGTAATAGGAGTGGGAAT
TCAGCGCCGTTATCACCCACGGCGCGGAGAAGAAAAAGGGGGGGAGAAGA
AAGAGGAGAACAAGCTGCAGCAGCATCTACAGCAGAAGCACCAGCACCTT
CGGATGATAGAAGGAGGCTTTCGTTTTGCTGGCTGAAAGCGCAGCGTGGA
GGATCTTCCGCGCATGAAGACCCTTTCCAGAACCTTGCGTTTGGAGATGG
CGTCGACGGGGCAGCAGCGGATAAAGCAGCGAGGCAGCAGCGATCCCCAT
CACCAGCGCCACCAGATCGCATCAAAGTCTTGGTAAAGACCGATTCAGGC
TTTAAAGATATGGACCAAAAACTGGATTTGGTGCTCGATGGGAGCAACAC
AACAATTGCTGACGTGAAGCAAATCTTGCAGAAGCAGATGAGTGGCAGTC
CACCCGTGAGACTACAGCGTTTATTCTACGCAGGCCGGAAGCTTCAAGAC
GCGGAGCTGGTCGGGGATGTAATGCGACAAGACAAAGAGGACGACGAGGA
AGAGGAAGGGAGGATTGGAGGGCGGCCAGCGGTGGCGTTGCCTATCGTGC
TGGACATGCCCCCCCCTCTTCCTCATTTGGATTATGAGGGGATGTTGGCG
TTGAAGGTTCGATTTGAATCACTTGATTTCAAACAGCCCTTATTTTATGC
CGCGAATGCCGTGGGGCTTCGATATGCGATCCAGGCGCTGGATGAGCATT
TATTGAGGGGGAGACCGACGGAAGGAGAGGAGGACGAGGAGGAGGACGAG
GAGGACGAGGAGGAAGGGGGGGAGGAGGCCAGGACGAGGAGGATGAAAGA
CGAGGTGATCATGTTGAAAGAATATCTTAAACAGCATGAGCAGGAGATGC
CCCCTCCTTCTCCAGTCAAACCGAACCCATATTTGATCAGTGCTGTGGTG
CGGGAGTTAGGTGTGCCGGGGTTGGAGGAGATTGTCAAGTCCCTGGCAGT
GCAGTTGAATTTTGACTGGGGACGTACGTGTAGGTACGCATTTGCTGCTT
ATTTGTTCGGAAAATTTGGAGCACAAGGGCCGTGGAAGCCGTTATTGCTG
TGCATGGTCCCGGGGGTTTTCTTGCTACAGTTGAAACCGTTCAGGTATGG
AGCAAAAGTGGCGTGGGAGATGATGGCCGTCTCGCCGCTGGTGGGTGGAT
TCTCGTCTGCCTTGCTGTCAGCGCCGCAGCAGGTATTGTTGACGTTTGAT
GAGCAGGCATATTTGGAGCGGTTGTATGGTGAGGGTGGTGGGGTGGTGCC
CCCCCCGATGGGACCACCGCCATCGATGTCAGATCTTAGGGGGGCGGGAG
GAGGGAGGGGAGAGGAAGAGGATGACGAGTACGAGGACGATGAGGATGAG
GGATTGAGCATGGAGACGCAAGCGGGAAATGAAAGAGAAAAGCTGGGGGA
GGAAGGGATGGAGGAGATGATGATGGAGGAGGAAGAGGAGGAGCAGGAGG
AGGAGGAGATGGAAGAACACGAGGATGCAGAGGAGGATGAAGAATTTGTA
GAAGCGGAAGACTATGATAATGGTGGTGATGATGATGAAGCAGAAGAAGA
AGAAGAAGAATAGGGC

protein sequence of jgi.p|Nanoce1779_2|667581

>mRNA_1699-protein ID=mRNA_1699-protein|Name=jgi.p|Nanoce1779_2|667581|organism=Nannochloropsis oceanica|type=polypeptide|length=625bp
MSSDAPSPPPLPPLRVRRRLALGTVALLLGSMLATVGAVAGGVAGGIGRG
RLATRPGGRQHPLPSWMRMGRGQGASKMAHIRSSRSRSSRSSSSSSSSSN
RSGNSAPLSPTARRRKRGGEERGEQAAAASTAEAPAPSDDRRRLSFCWLK
AQRGGSSAHEDPFQNLAFGDGVDGAAADKAARQQRSPSPAPPDRIKVLVK
TDSGFKDMDQKLDLVLDGSNTTIADVKQILQKQMSGSPPVRLQRLFYAGR
KLQDAELVGDVMRQDKEDDEEEEGRIGGRPAVALPIVLDMPPPLPHLDYE
GMLALKVRFESLDFKQPLFYAANAVGLRYAIQALDEHLLRGRPTEGEEDE
EEDEEDEEEGGEEARTRRMKDEVIMLKEYLKQHEQEMPPPSPVKPNPYLI
SAVVRELGVPGLEEIVKSLAVQLNFDWGRTCRYAFAAYLFGKFGAQGPWK
PLLLCMVPGVFLLQLKPFRYGAKVAWEMMAVSPLVGGFSSALLSAPQQVL
LTFDEQAYLERLYGEGGGVVPPPMGPPPSMSDLRGAGGGRGEEEDDEYED
DEDEGLSMETQAGNEREKLGEEGMEEMMMEEEEEEQEEEEMEEHEDAEED
EEFVEAEDYDNGGDDDEAEEEEEE*

mRNA from alignment at scaffold_1:1270445..1275660-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1699 ID=mRNA_1699|Name=jgi.p|Nanoce1779_2|667581|organism=Nannochloropsis oceanica|type=mRNA|length=5216bp|location=Sequence derived from alignment at scaffold_1:1270445..1275660- (Nannochloropsis oceanica)
GGTGATTTCATGATAAAGGTCGCCTTGGGTCGTCTTAGCACCCACAGTGC
TGCAGTGCTGTCATGTCTTCTAGTTTATGATCTTTTTTTTATTGTCATTC
AGGTATGGTATGCTGTGAGTGAGTGCATTTTTGTCTTTTCGACCTACGTT
GCCTTTGTGTCTAATCATTTCACGAATCATCTGTCTTAGTATATTTCCCG
TCCTCTCATTCCTCTTCCTCTGGCAGCTCCCTCCGACACTACAACACTCC
ACAATCTAGAACATGGGAATTGGAGGATATTTTTCCTGTCTCCTTTTCGC
CGCCCGGGCCATGCCTTGTGCAGCGTGGACTGTCTGCAAGTAGTTTACGT
ACAACACAGCCGCCTTGAGTACCACCTTCTTCCACCATGACTTCCTCAGG
AACCGGCTCCTCCCCATCTCCAACTCTTCCTCCCCTGGAAAAAGAACCTC
CACCTCCATCCTCCGATCCGCCACTTCCAAGTCCATCTCATCCTTCAACC
GTTCTAACGCCCATTCCCACTCCCACCCCTGCATCCTTCCCTTCCTCCGC
CCTACGGAAGCTGGAACAGCTGCTTCGGCCGCTTTTTGGAAGGCGGTGCT
CACGTCTTTTGTTATGGACGTCGCCTCCTTGTCCAAGGCACGTACAGGGA
GAAAGAGGCCAGTAAAACGGTCTTGGAATTTTGCAAAGTAATACTCGTTC
AGGGCGTCGAGGTGTTGGCGGAAGGAGGGAGCAAGTCGGCGCGTGAGTGC
GGCAATGACATCAGATTCCGCGGTCGTGGCAGCAGCAGCAGCAGCAGCAG
CAGAGGGAGGAAGGCGGACCGAGAGCGATTTGAGTGAGGAGGTAATGATG
CTGTCGGCGTCGCGGCCGTATTCTAAAATGGGCATCTCACTGGCAGCTGC
CTCTACCTTATGCCCCAATCTCTCGATGCGTTTCTCCGCCTCCTGGACAA
TGCTTTCCACCACCTTCCGACGAATGAAGGCTTGGATCTCTTCTTCGTCC
GTTCCTCGCTTTGAGGGGGACGGGAGGGAGGCAGGGCTGTCTCCAACCAT
CCCTCCGGCACTTTCCTGGATGATGGAGGCCCAGAGCTCAGCGGCGAAGG
CGGGGAATTCGGAAAGAGGTACCGGTTGGAAGAGCTGCGTGGGTGCTTCT
GACCAGGAGGACGGCTTCTTCGTCTTGATTGTTGACAATTCAGCTCTTCC
GATCCCTGTTGCGTTTGCTGACGATTCTCGGTCAAAGAGCAGGAGAGTGC
GTCGAAGCTCTTGCACTGCCTCTTCGAACGCACTTGGCTGGAATTCTCTG
GAAGGCATTGCTACCACCCGTACGTCCAACCCCCCTTCCTCTGCTTTCCC
TCCCTCCTTCTTCGTCGTGGTCGATTTCTTCGATCCTTTCACTAAAGAGG
CGGAAAAGGAGGAGAAGGAAGAGGAGGAGGAAGGGGGGGGGTGTCCCAGA
GCAGCGTAAGCCTCTTCAAGGCAGCGCGTGACGATGCCCAGGGCCCCCGC
CGCGTCTCCATCCAGCTGCTCTGAGTCCCTCAAGACCACCACCAACGCCT
TCCTCCTCTTGGTCAGTCTAGAGACAGTGGTCTTCGTCGTGGTTGTTGTT
GCTACTGTCTTTCCCTGATTCTCTTTCTCTTCTTTCTTTTTCTTTCCTCC
TTCACTCGCCCTTCCACTCGAGCTCCTCGTCGTCACCGTCGTCGTCCGCT
CGATCAATGTCTGCAGCAACGATGCATGCAGCTCCCCTCCCATCCGGCCC
CCTCTAATATCCCTCGCCCATACATTTAAAATGATAACGTCGGCGGCCGT
TACTGCTAGCGCGGAGAGCTGCCGATCGAAGAGGTCGCTCCCCTCCCCAC
GTGCCACGCTTTCCAACCCTTCCGTGTCCAGGACCACCAGCGGTCTTTGA
CTTTGGCAAGCAGACGATAAGGTTGCTGTTGGACTGCTACTACTGCTGGC
ACTGTTGCAGCTACTCCCTTTCTCGCTGCCAAGGTCAACCCAAACGCCCC
TCGTCGTCCTCCTTCCCGCCCCTGCATCCCTCACATTAAGCACCGGAAAC
CTTGTTCCAAACAAAGCATTCAATAAGGTGGATTTCCCACTTGCTTGTGG
GCCAACAATGGCCACCACGCCATATTGCAATGCGGTGTACAACTCCTCCT
CCTCTGCAAAACTCTGTATGCCTTGTGTCCGCCAGGTTGCTTGCTTCTTT
TCCTCCTCCTCCCCCTCCTCCTCCTGCTGATCCTCCACGTCCGCCTCTTC
GAGGTGGCATTCGTGCGTCACCATTGACTGAAAGCGTTCTCCGATGGTAA
AAAAAAAATGTGCCTCATTTTCCTCCTCTTTCCTTTGTCGAGCAGGGGTT
GGATGGGCGGGAGGCGGACTGCTGCTGCTCTTACTGGACCCTACCCCCCC
CCCTCGCGCTGCGTGCAAGGAACATGGGCGGCTCTGAGGGCCCCACAGCT
TAGAGGAGGGTGCGCTTAAGGTAGCAACGGTGGTTGTGGGTCGCAGGAGG
GTAACGACCAGCTCGAGGAGTAAGGTTGCAGTGATGATGAGGGATAGACA
GCTACTGGTGGGGAGGCTAGGCAACGTCCTTGGTCTCCTTGGATGGCTGA
GCTGTATTGGTGGCGTCAGCCGCTTCCTCGTCATGACTGCAAGTGTCCTA
CGTGATGATATGGGTTTAAAAAGATGGAATGAGAGTGAGGGAAGGAGTAC
GCAGACACATTCTATGCGGCTCCAGGTTACAAGTCGCCCTCCCTGAGGGG
CTTGTCGGCAGCCATTTGCTTCCGCTGCTTTTTCCCACTCCCGTCGTCGA
CCGCCTCAGTGATCGTGGGCATAGTCGTGGGACCAGGGTTAGGCAAATTG
GGGGAGGCAACAGGCTGTGTAGATAAACGAGATTTATCGATACAGCAGCG
GCGCGATTGAAAACGGCTATCTGTGGTTGAGGGATGGTTTGGTTCGGTTT
TATTTGGTACTACTCTTAATACTGGTGCCGCCTCTCTCATTCTTCTCACC
CTCAACCTTCTATGTATCTGGACACATAGGCTCCACGTCGTGGAGAACTG
TGAAACAACACATTCGGCCCCTTCCCCTCCTCCCTTTTTTTCTCAAAAAA
GCGACGGATGGGTACTGCACGTTTGCCTCACGCAAATCAACCCTCTCGGT
TGCGTGTGGCTTCCGGACAGCGTGACAGAGTGCTGTACCCACTCCCTAGC
ATCTGTCCAATAAGAGACATGATTTCAAGCATAAAATATTGTAACACTCA
AAGTTCCTTCCCTTGATAAAATCCCTCTTCAGGCAAGGAGAGCTGCAACT
CAGCCAAGCAGGGTGCTCCTCCTCACCCTCAAGACACAATGAGCAGCGAC
GCTCCAAGCCCACCCCCACTCCCACCACTACGAGTCAGACGACGGTTAGC
TCTGGGCACGGTGGCACTCTTGCTGGGCAGCATGTTAGCGACGGTAGGCG
CAGTAGCAGGTGGAGTAGCAGGCGGAATAGGGAGGGGGAGGCTAGCAACA
CGACCAGGAGGTCGGCAGCACCCGCTGCCGTCATGGATGCGCATGGGACG
AGGACAAGGAGCGTCAAAGATGGCGCATATCCGCAGTAGTAGAAGTAGAA
GTAGTAGAAGTAGTAGTAGTAGCAGCAGCAGCAGTAATAGGAGTGGGAAT
TCAGCGCCGTTATCACCCACGGCGCGGAGAAGAAAAAGGGGGGGAGAAGA
AAGAGGAGAACAAGCTGCAGCAGCATCTACAGCAGAAGCACCAGCACCTT
CGGATGATAGAAGGAGGCTTTCGTTTTGCTGGCTGAAAGCGCAGCGTGGA
GGATCTTCCGCGCATGAAGACCCTTTCCAGAACCTTGCGTTTGGAGATGG
CGTCGACGGGGCAGCAGCGGATAAAGCAGCGAGGCAGCAGCGATCCCCAT
CACCAGCGCCACCAGATCGCATCAAAGTCTTGGTAAAGACCGATTCAGGC
TTTAAAGATATGGACCAAAAACTGGATTTGGTGCTCGATGGGAGCAACAC
AACAATTGCTGACGTGAAGCAAATCTTGCAGAAGCAGATGAGTGGCAGTC
CACCCGTGAGACTACAGCGTTTATTCTACGCAGGCCGGAAGCTTCAAGAC
GCGGAGCTGGTCGGGGATGTAATGCGACAAGACAAAGAGGACGACGAGGA
AGAGGAAGGGAGGATTGGAGGGCGGCCAGCGGTGGCGTTGCCTATCGTGC
TGGACATGCCCCCCCCTCTTCCTCATTTGGATTATGAGGGGATGTTGGCG
TTGAAGGTTCGATTTGAATCACTTGATTTCAAACAGCCCTTATTTTATGC
CGCGAATGCCGTGGGGCTTCGATATGCGATCCAGGCGCTGGATGAGCATT
TATTGAGGGGGAGACCGACGGAAGGAGAGGAGGACGAGGAGGAGGACGAG
GAGGACGAGGAGGAAGGGGGGGAGGAGGCCAGGACGAGGAGGATGAAAGA
CGAGGTGATCATGTTGAAAGAATATCTTAAACAGCATGAGCAGGAGATGC
CCCCTCCTTCTCCAGTCAAACCGAACCCATATTTGATCAGTGCTGTGGTG
CGGGAGTTAGGTGTGCCGGGGTTGGAGGAGATTGTCAAGTCCCTGGCAGT
GCAGTTGAATTTTGACTGGGGACGTACGTGTAGGTACGCATTTGCTGCTT
ATTTGTTCGGAAAATTTGGAGCACAAGGGCCGTGGAAGCCGTTATTGCTG
TGCATGGTCCCGGGGGTTTTCTTGCTACAGTTGAAACCGTTCAGGTATGG
AGCAAAAGTGGCGTGGGAGATGATGGCCGTCTCGCCGCTGGTGGGTGGAT
TCTCGTCTGCCTTGCTGTCAGCGCCGCAGCAGGTATTGTTGACGTTTGAT
GAGCAGGCATATTTGGAGCGGTTGTATGGTGAGGGTGGTGGGGTGGTGCC
CCCCCCGATGGGACCACCGCCATCGATGTCAGATCTTAGGGGGGCGGGAG
GAGGGAGGGGAGAGGAAGAGGATGACGAGTACGAGGACGATGAGGATGAG
GGATTGAGCATGGAGACGCAAGCGGGAAATGAAAGAGAAAAGCTGGGGGA
GGAAGGGATGGAGGAGATGATGATGGAGGAGGAAGAGGAGGAGCAGGAGG
AGGAGGAGATGGAAGAACACGAGGATGCAGAGGAGGATGAAGAATTTGTA
GAAGCGGAAGACTATGATAATGGTGGTGATGATGATGAAGCAGAAGAAGA
AGAAGAAGAATAGGGC

Coding sequence (CDS) from alignment at scaffold_1:1270445..1275660-

>mRNA_1699 ID=mRNA_1699|Name=jgi.p|Nanoce1779_2|667581|organism=Nannochloropsis oceanica|type=CDS|length=1875bp|location=Sequence derived from alignment at scaffold_1:1270445..1275660- (Nannochloropsis oceanica)
ATGAGCAGCGACGCTCCAAGCCCACCCCCACTCCCACCACTACGAGTCAG
ACGACGGTTAGCTCTGGGCACGGTGGCACTCTTGCTGGGCAGCATGTTAG
CGACGGTAGGCGCAGTAGCAGGTGGAGTAGCAGGCGGAATAGGGAGGGGG
AGGCTAGCAACACGACCAGGAGGTCGGCAGCACCCGCTGCCGTCATGGAT
GCGCATGGGACGAGGACAAGGAGCGTCAAAGATGGCGCATATCCGCAGTA
GTAGAAGTAGAAGTAGTAGAAGTAGTAGTAGTAGCAGCAGCAGCAGTAAT
AGGAGTGGGAATTCAGCGCCGTTATCACCCACGGCGCGGAGAAGAAAAAG
GGGGGGAGAAGAAAGAGGAGAACAAGCTGCAGCAGCATCTACAGCAGAAG
CACCAGCACCTTCGGATGATAGAAGGAGGCTTTCGTTTTGCTGGCTGAAA
GCGCAGCGTGGAGGATCTTCCGCGCATGAAGACCCTTTCCAGAACCTTGC
GTTTGGAGATGGCGTCGACGGGGCAGCAGCGGATAAAGCAGCGAGGCAGC
AGCGATCCCCATCACCAGCGCCACCAGATCGCATCAAAGTCTTGGTAAAG
ACCGATTCAGGCTTTAAAGATATGGACCAAAAACTGGATTTGGTGCTCGA
TGGGAGCAACACAACAATTGCTGACGTGAAGCAAATCTTGCAGAAGCAGA
TGAGTGGCAGTCCACCCGTGAGACTACAGCGTTTATTCTACGCAGGCCGG
AAGCTTCAAGACGCGGAGCTGGTCGGGGATGTAATGCGACAAGACAAAGA
GGACGACGAGGAAGAGGAAGGGAGGATTGGAGGGCGGCCAGCGGTGGCGT
TGCCTATCGTGCTGGACATGCCCCCCCCTCTTCCTCATTTGGATTATGAG
GGGATGTTGGCGTTGAAGGTTCGATTTGAATCACTTGATTTCAAACAGCC
CTTATTTTATGCCGCGAATGCCGTGGGGCTTCGATATGCGATCCAGGCGC
TGGATGAGCATTTATTGAGGGGGAGACCGACGGAAGGAGAGGAGGACGAG
GAGGAGGACGAGGAGGACGAGGAGGAAGGGGGGGAGGAGGCCAGGACGAG
GAGGATGAAAGACGAGGTGATCATGTTGAAAGAATATCTTAAACAGCATG
AGCAGGAGATGCCCCCTCCTTCTCCAGTCAAACCGAACCCATATTTGATC
AGTGCTGTGGTGCGGGAGTTAGGTGTGCCGGGGTTGGAGGAGATTGTCAA
GTCCCTGGCAGTGCAGTTGAATTTTGACTGGGGACGTACGTGTAGGTACG
CATTTGCTGCTTATTTGTTCGGAAAATTTGGAGCACAAGGGCCGTGGAAG
CCGTTATTGCTGTGCATGGTCCCGGGGGTTTTCTTGCTACAGTTGAAACC
GTTCAGGTATGGAGCAAAAGTGGCGTGGGAGATGATGGCCGTCTCGCCGC
TGGTGGGTGGATTCTCGTCTGCCTTGCTGTCAGCGCCGCAGCAGGTATTG
TTGACGTTTGATGAGCAGGCATATTTGGAGCGGTTGTATGGTGAGGGTGG
TGGGGTGGTGCCCCCCCCGATGGGACCACCGCCATCGATGTCAGATCTTA
GGGGGGCGGGAGGAGGGAGGGGAGAGGAAGAGGATGACGAGTACGAGGAC
GATGAGGATGAGGGATTGAGCATGGAGACGCAAGCGGGAAATGAAAGAGA
AAAGCTGGGGGAGGAAGGGATGGAGGAGATGATGATGGAGGAGGAAGAGG
AGGAGCAGGAGGAGGAGGAGATGGAAGAACACGAGGATGCAGAGGAGGAT
GAAGAATTTGTAGAAGCGGAAGACTATGATAATGGTGGTGATGATGATGA
AGCAGAAGAAGAAGAAGAAGAATAG

Synonyms

Publications