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Properties
| Property Name | Value |
|---|
| TranscriptId | 573185 |
| Track | FilteredModels2 |
| ProteinId | 573099 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1237127..1238819 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1688 ID=mRNA_1688|Name=jgi.p|Nanoce1779_2|573099|organism=Nannochloropsis oceanica|type=mRNA|length=1693bp
GTGGTCACATTTTGTCGTATTGCTCCCACGCCAAAAGCCACATGCCGTGT
TCCTTTCCAAAGTGGTGGAAGCACTGGCAAATTATTTCCTTGGGCGTCTT
GTATTGGTACTTGTTCTTCTCGTTGTTGGTACACTTAATGTGGATAAATG
GATGATAAATCGTATGTAGGGAGTGGAGACACTTTGTCGTCCCGAATTAT
TTTCTCCTTGTGGAAGGGAAGGACACGTAGACTAGTAGGGTGCAGGGCGA
CGACAAACGAAGACAAATCTACAAGGTAAGCTGCCGCTGTTGCCTTCACC
CGTTCTCACTTTCCCTCACTCGTACGCCCACTACTCTGCCCGATGGTATG
TGCTTGCTTACATCTTCTGTCTGTGTGTTGACCTTGGACATGCCCTTCTC
CTCTTCTTGCTTTGAATGGGTTGCTTTGATCCAGTCTTCTCGCGAGGCTG
CTGCTGTTGCAAATGCTACTGCTGCTGCTTCTTCTTCTTCTTCCTACTCT
TCAACTGCTTCTTTTTTTTAGGTCTCTCTGTACATGTTTGAAATATCCGC
CCATTGACTCGCTTTTTCTGTTGTTCGTATGCGACTGTTGATGCTGTCGC
TTGTCTTGCCTCCGCTGCTGCTGCTGCTGGCTTTCCTTTCCTTTCCCCCT
ATTCATCTTCGTTTCACTTTGGTAGTTGTATGATGGTGGTTGTGGTCGAC
GTCCATAAAAATATGCGTATTATAGTGTACCTTTTCCTTTGTTCCTCTCC
ATCCTCCCTATCTCTCTCTCATTTTCTCTCTCTCTGTCTCTCTCTCATTT
TCCCTGATTCTCGTTCTCACTTTTTCATTTTCTCTCTTGGGGAATATCGG
ACGTATTATCTTCACATGCTTGATTGATAAATGTCACAATATTATATAAG
TGTAATGTGGGTCTTTCGTTTTTCATCTTCGTGCTTTTTTGGGTTGGTTG
CCATGATCCTTGCGCTCTTCTTCTCCTCTGCCGACGTCAAAAATGGTCTC
TTTCTTCCCCCCTTCCCCTTTTATCCCCCACCTTCTTTGTGTGAATTTTG
TCTTCTGCGGTTCGTGTTGGTGGCCTTAATTACTTCCTTTCGCCCACTCG
TAACTATCGCCCTTACGCTTTTCGTCTCCATCATCGTCTTCCTCAACCAC
ACAATTCGTCTTGCTTCGCCATTCCTTACGTTCCCCATCGGTTCTTTTTC
CACCATACATGTACATACAAGCACATGCACGCACATACAGATGACTGACA
CTGAATGGATCAAAACAGAGGGGCCGCATTCGTCTTCTCCTTCCACTTCT
CCCTCGGGGTACTTTATCTCCCTTTATGTTTATCGTCTTCCTTCTTCCAT
CTTCCCGCTTGTGCTGCTGTGGCTGCTTTCTCTTGGTCTCCGCATATGTA
CACAAAAATCGTGAGATAGTCATTTTTCCTCCTCCTCTTCCCCCTACACA
GAGGCGCATGCACAAATCCCGTTGTTCTCTCCATCGTTTCCTCCCTTCCT
CATTCTTTCCTACTCTCCCCTTGGGATTGAAAGCGATTGTCTCGTCTCTT
GCAAATAATAAGAGTGTCCCTGTACACAAATAAACCGTCCCTCCCTCTGT
CCTCCCATCTTCCTCCCTCCATCCCTCCCTCCCTCAAACAAAAAGGGTAA
CATTCTTAACCTCCACAGGGACGCTGCCTCCATTCCCTACTCC back to topprotein sequence of jgi.p|Nanoce1779_2|573099 >mRNA_1688-protein ID=mRNA_1688-protein|Name=jgi.p|Nanoce1779_2|573099|organism=Nannochloropsis oceanica|type=polypeptide|length=178bp
MSQYYISVMWVFRFSSSCFFGLVAMILALFFSSADVKNGLFLPPFPFYPP
PSLCEFCLLRFVLVALITSFRPLVTIALTLFVSIIVFLNHTIRLASPFLT
FPIGSFSTIHVHTSTCTHIQMTDTEWIKTEGPHSSSPSTSPSGYFISLYV
YRLPSSIFPLVLLWLLSLGLRICTQKS* back to topmRNA from alignment at scaffold_1:1237127..1238819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1688 ID=mRNA_1688|Name=jgi.p|Nanoce1779_2|573099|organism=Nannochloropsis oceanica|type=mRNA|length=1693bp|location=Sequence derived from alignment at scaffold_1:1237127..1238819- (Nannochloropsis oceanica)
GTGGTCACATTTTGTCGTATTGCTCCCACGCCAAAAGCCACATGCCGTGT
TCCTTTCCAAAGTGGTGGAAGCACTGGCAAATTATTTCCTTGGGCGTCTT
GTATTGGTACTTGTTCTTCTCGTTGTTGGTACACTTAATGTGGATAAATG
GATGATAAATCGTATGTAGGGAGTGGAGACACTTTGTCGTCCCGAATTAT
TTTCTCCTTGTGGAAGGGAAGGACACGTAGACTAGTAGGGTGCAGGGCGA
CGACAAACGAAGACAAATCTACAAGGTAAGCTGCCGCTGTTGCCTTCACC
CGTTCTCACTTTCCCTCACTCGTACGCCCACTACTCTGCCCGATGGTATG
TGCTTGCTTACATCTTCTGTCTGTGTGTTGACCTTGGACATGCCCTTCTC
CTCTTCTTGCTTTGAATGGGTTGCTTTGATCCAGTCTTCTCGCGAGGCTG
CTGCTGTTGCAAATGCTACTGCTGCTGCTTCTTCTTCTTCTTCCTACTCT
TCAACTGCTTCTTTTTTTTAGGTCTCTCTGTACATGTTTGAAATATCCGC
CCATTGACTCGCTTTTTCTGTTGTTCGTATGCGACTGTTGATGCTGTCGC
TTGTCTTGCCTCCGCTGCTGCTGCTGCTGGCTTTCCTTTCCTTTCCCCCT
ATTCATCTTCGTTTCACTTTGGTAGTTGTATGATGGTGGTTGTGGTCGAC
GTCCATAAAAATATGCGTATTATAGTGTACCTTTTCCTTTGTTCCTCTCC
ATCCTCCCTATCTCTCTCTCATTTTCTCTCTCTCTGTCTCTCTCTCATTT
TCCCTGATTCTCGTTCTCACTTTTTCATTTTCTCTCTTGGGGAATATCGG
ACGTATTATCTTCACATGCTTGATTGATAAATGTCACAATATTATATAAG
TGTAATGTGGGTCTTTCGTTTTTCATCTTCGTGCTTTTTTGGGTTGGTTG
CCATGATCCTTGCGCTCTTCTTCTCCTCTGCCGACGTCAAAAATGGTCTC
TTTCTTCCCCCCTTCCCCTTTTATCCCCCACCTTCTTTGTGTGAATTTTG
TCTTCTGCGGTTCGTGTTGGTGGCCTTAATTACTTCCTTTCGCCCACTCG
TAACTATCGCCCTTACGCTTTTCGTCTCCATCATCGTCTTCCTCAACCAC
ACAATTCGTCTTGCTTCGCCATTCCTTACGTTCCCCATCGGTTCTTTTTC
CACCATACATGTACATACAAGCACATGCACGCACATACAGATGACTGACA
CTGAATGGATCAAAACAGAGGGGCCGCATTCGTCTTCTCCTTCCACTTCT
CCCTCGGGGTACTTTATCTCCCTTTATGTTTATCGTCTTCCTTCTTCCAT
CTTCCCGCTTGTGCTGCTGTGGCTGCTTTCTCTTGGTCTCCGCATATGTA
CACAAAAATCGTGAGATAGTCATTTTTCCTCCTCCTCTTCCCCCTACACA
GAGGCGCATGCACAAATCCCGTTGTTCTCTCCATCGTTTCCTCCCTTCCT
CATTCTTTCCTACTCTCCCCTTGGGATTGAAAGCGATTGTCTCGTCTCTT
GCAAATAATAAGAGTGTCCCTGTACACAAATAAACCGTCCCTCCCTCTGT
CCTCCCATCTTCCTCCCTCCATCCCTCCCTCCCTCAAACAAAAAGGGTAA
CATTCTTAACCTCCACAGGGACGCTGCCTCCATTCCCTACTCC back to topCoding sequence (CDS) from alignment at scaffold_1:1237127..1238819- >mRNA_1688 ID=mRNA_1688|Name=jgi.p|Nanoce1779_2|573099|organism=Nannochloropsis oceanica|type=CDS|length=534bp|location=Sequence derived from alignment at scaffold_1:1237127..1238819- (Nannochloropsis oceanica)
ATGTCACAATATTATATAAGTGTAATGTGGGTCTTTCGTTTTTCATCTTC
GTGCTTTTTTGGGTTGGTTGCCATGATCCTTGCGCTCTTCTTCTCCTCTG
CCGACGTCAAAAATGGTCTCTTTCTTCCCCCCTTCCCCTTTTATCCCCCA
CCTTCTTTGTGTGAATTTTGTCTTCTGCGGTTCGTGTTGGTGGCCTTAAT
TACTTCCTTTCGCCCACTCGTAACTATCGCCCTTACGCTTTTCGTCTCCA
TCATCGTCTTCCTCAACCACACAATTCGTCTTGCTTCGCCATTCCTTACG
TTCCCCATCGGTTCTTTTTCCACCATACATGTACATACAAGCACATGCAC
GCACATACAGATGACTGACACTGAATGGATCAAAACAGAGGGGCCGCATT
CGTCTTCTCCTTCCACTTCTCCCTCGGGGTACTTTATCTCCCTTTATGTT
TATCGTCTTCCTTCTTCCATCTTCCCGCTTGTGCTGCTGTGGCTGCTTTC
TCTTGGTCTCCGCATATGTACACAAAAATCGTGA back to top
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