jgi.p|Nanoce1779_2|626987, mRNA_1685 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|626987
Unique Name	mRNA_1685
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4899
Alignment location	scaffold_1:1230093..1237039 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	627073
Track	FilteredModels2
ProteinId	626987

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_1	supercontig	scaffold_1:1230093..1237039 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|626987	gene_1685	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|626987	mRNA_1685-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1685	CDS_1685	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_1:1230093..1237039+
coding sequence from alignment at scaffold_1:1230093..1237039+

mRNA sequence

>mRNA_1685 ID=mRNA_1685|Name=jgi.p|Nanoce1779_2|626987|organism=Nannochloropsis oceanica|type=mRNA|length=4899bp
CCCTGAATGTGGGGTCGACGAAGGCGATTTTAACCTCCCCTCCCTTGCCC
TTCCCCATCCCCACCCCCTCCCACACGTCGCCTCTCCTCCAAGACAAGAA
GGGATGCGGCAAGACGATAAAAACGACGAAGAGGATGGCTTTCTATCAGC
CGGCGACAGCAATTCCAACCCCTCCTCCACGACTATCTGCGCCGGGACCA
CAAGTTTCCCTCCAAAACACATCAGCGACCTCTCCTTCCTCTTTGCAGCA
CTCCATCAGAAATGCAGCGTGAGCGGGTCGATCGCGTTGGCAGCAATTAT
GATGATGAATCGATGGAGCCTTGCCTTAGGTTGTCCAGGCGGAGTACCCG
TAGCCATGATGTCCCGCAAGGCTGCGCTTCAGCAGCAAGTGTCACCCTCC
CAAACGCTACGTGCCGAGATTGAGATGGAACTACTGGGAAGCGACGGTGC
TGTGAGTTCAGAGGCTACGTCACCGTTTATGTACAGTATTCCCTTGCTTC
GTCTTTCCCCAAAATTAGCACCGACAGCAGGAGCAGGAGCTCGTGTGGAA
GACACACCACAACTACAACAACCACGCTCAAGGCACTTCTCCGACTCCCG
GCGCTACATGGATTCTCGAACTTTTTACGCGCGGCAGAACGCTGAAGCAT
TCGAGTCCATTGTGCCTTATGGCGTCACCACCAACACTTTTATTGTTGAT
GCCTATGTCCGCTGCATTCTGGCCTATCTTGAGGATGTCCGACACCACTA
CGATGACGGAAGGAGTAGCGGCAACAAAGGCAGCGACAGCACCACCCTTC
CCACCAACACCAGCAAGAAGAAGGGCAGTGATGACTTCGACCCAATTTCC
TCGACCAGGACTAGCACAACACCTGACGGCAACAGTCAATTAAAGACAAA
AGTGTACATCATTGAGCTCGCCGCTGGGCATTGCCTTTTCGGTTATTTAC
TGGCCAAGCGTCTGTTGCAAGCACAAGAGGAGGGCGTGCTGCCCCCCTCC
TTCTGCTCATCCATCTGTGTTTTGTTGACAGATTTCAACAAAACACTACT
TGAAAACCGCATGAATACTCCTTGGATGCAGCCTTTGGTAGCCGCGGGGC
TGATCGAATTTGCGGTGCTTGACGCCGCATCCTCTTCCTCTCAAGGCATT
CATGGAAAAGGAGGTACCAAGGCACAACCATTAGTGCTGCTGGGAAAGGA
AGTGACTATGTTGGAGCCGGAAAGTTTGAAAGGCCCTGTCTTTGTGGTGG
GCAATTATGCTTTGGATTCGTTCCCGGTCGATATTTTTATGCAGACCAAG
ACGCAGGGATTGATGGAGGTGAGGGAGGAGGAGGAAACTGGGCGTTTGAC
GCTTGTCTCATCCTCGGTAGGAACACTGGAGGAAGAAGGGGAAGGGAAGG
CATACCCTTACCACAACATTCTCCAGGCATTGGTCGGACGAGGAGAGGAG
GGAGTGCTGCATGTTGTGAACGTCGGGCTTATTCGCCTTCTAGAACGCAT
TCGCGGCTTGCTCCATCCCCATCACAAGGGCGACCTGGCTTTGCTTCTGG
CTGATGGGACATTCCAGTACGATGACCCTACATGGAGGGTACAAGTCGTA
CCTGGAGAGGAGATCGAGGGAGCGCAGGGGGAGGAGGAGGTGGAGAACGA
GGACGAGAAGGGCAAGCGACAGGTACAGCAGCAGGTACAGCAGCAGCAGC
AGCGACAGCAGCGGGAGGAGCAAGTGCCAGAAGGAGAGTGTGCGGCCGTC
AGCCAGGACCCGCACATACAGCACCTTCAGCTTCAATACGAGCATGGCCG
GCAGCATTCAAAAGTCAAACCCAGTTTCCGAAAACGGAAGCGAAAGCTGA
CCATTTCACTTCCTGACATGAGTCCTGGGCCTGGTAGCGGATGTTTTGCG
CTCGCCATGGACCCTCAGGCCGTGGTCACGGCGGCATTGTGGGCGCTGGG
GGTGAAAGAGGAGGAGGGCAGGGAGGGAGTGGGTGAGGGAGAAAAATGGC
TAGCGGTGCGCAACACGGTGGTGGAAGGGAGCCTGACGACGACCCTCTTT
GCGCAAGTGGAAGATAGAAAACATGAGGAAGAAGGAGGAGGGGAAGATTG
GCCATTGCCGTGCACGAGAGAAGCCTTTTGGAGGCATGTGTGCTTGCAGA
ACCCCACGGATTTTGAGCACTTGCAAGGCCTTATTTTAGAGGAGCACAAT
CGAGACGGCTATGATAGTAGTGGTACTGAAAGCCTCCTGGCTTGTCTGGG
CTTGGATGGGATGCTGGCCTTGCTGCGATGGTCTGGTTATGATGGAGATT
TGTTCTTTGCCCTTCGATGGCCGCTCCGTAATGCGATACTGCGTTGTCGT
CGTCTTGCTAGTGCAGATGGTCATAAAACAAAAATAGACGTGGGTGCAGA
CTACAAGGAGGTAGCGCTCCGTTGCCTTTCAAATCGGATGGTGTTGAGCA
CCAGGGCATGGAATCGGACGCGGTATTGGGGTGAACAGTTTCTATTCGCT
TTGGGCTGCTACCGCGAGACGGTGGCTTTCTTTTTGCATGACACTTCTGG
ATGTGTTGGTCCCATCTCCTTGTCGTCCGCTTCTACCCTTGAATTGTGGA
AAGACGAATACTCTGGAAGATTTGGAAGTTCAGCCGAGGCATTTTTGGTG
ACAATGAGCCTTAAAAACGTCGTTCACACTGAAAATGCGGAATTGACAGC
ACATCATGTTTTGGTGGGAGTGATGGAGGGACAGAGATTTCTGGATGGCA
AAGGACGGCGACGCATCGAGAACTACTTGAAAAGGGACCAGTGTTTACTT
CGTAGAGACAAGAGCAATTAAAGGGTAACAACCCGCCAACAAGACAAGTC
CTAATGGCCCATATGGGAAGTAAAGAGCATTCTTTCTCTCTTTAGTGTTG
CCCTGGCTGCCCAGCGCACTCTGCAGGACGTTCGTCCACGGTTGCTCACA
ATAAAATGTAGGTAACAGACCTTTTCATTTCATAGCGACAATACGCACCT
CTCCGCGTGCGCACATTTGGCAAAATATGGATCGTAGTGTTCGCCTGTTG
CATCTTCAGGGTGACAAGAGCAGTGGACTTTGCGTGGGAAAAAACAGAAA
AGTGGCACGTTTCCGGGGAAAGCGTCACCAATTTGACTTCACAGTCAACC
ACAACAAGCGATGCGGCGTCGATGCAGCGTGCCTTTGACCCTTCAAGCTT
TTGTTAACATTGTTGAGTCTGGCTGTATGCCTTATACGAGAGTTGGTTAC
GGGCAACGAGAAGCCCCTCTGTCGTGGCCTGGCCGCCAGCTTGGACATTC
GCTCGCCCTACTCGAGCCCATGGGCTTTTCTTCCGACCAAGTCTTTATTC
TCCATGCCTATGCCTTGTCTGTCCTTTTCCGATGCACGTAATTTCCATTC
CGCGTCTCATGTATCTGTAAGTCTCAGAGTCCCTTTGGACCCCTGTGTGG
TTCTGTGTGTGGCATTTTTCGCCCCTTTTCTCTGCATCAGCGAACCAGAA
CAAGAACACGGGCCAGAGGAACGCGCCGTGGGAGGACGGTCACCCCTCAC
CTCTTTTTGCTTGGTCAGGAGGATAAGACACTCGACAGCAGCACAAGCCA
TCTTCTCGAGGTCGCAACCTGGTCGACGTGGGCTGGTGTCCACTCCCCTC
TCACTCACACTACATTTGAGCCCTTTTTAATCCCTCGGGGATCGACAAGG
TTTCAACTGGGCAGTGGCACTGGTGTCCGTGGTACCGTGGACAATTCACA
GGCCCTGCAGCCACGCAGGGGCGAGGGGGAAGGGTGTAACACTGCTTTGC
ATGCACCCCGATCGGCTTTCTTGTGATGCGAACCCGGCTGCCAGCTTCAG
CACAGCCAAGAAAAGGGCGCCGCGCCCCTTTGACAACGCACATACAGAGT
GATGCGGCGGGTCTGGACACCCACAGCTCCTTCGTCCCCTTTCTCTGACA
CTGACACGCCCTCCCACCCCCACGCACAGAAAGAGGCAGCCACCACCGCA
CAACAAGCAGTGTCCTAGTTCGGTGAAGCTTGGAAGCGTCGCCTCGGCAT
CACCACCTCATCCAAAACAACCGACACAACCCATCCCAGGCCCACGCCTC
CGAGACATCTACTTTGAATTAACATGTCGCTCGACGCGGCCGAGTCCATG
GAGACGCGAGGGGATCCCGCCCACCAGCGCCAACAAGAGCTCGAACAACA
GCAGCAGCTCCACTACGGACATACGGACCACCCTCCCCCCCCCTTGCCTC
CCCCGCCCCCTTTCCCTCGCTCCGACCCGCATCATCACCACCTCCATCCT
CACGGCCCTCCTCCGCCTTTTGGCTATGCAGTCTCCCTGGGGGTCCATGC
CCCTCCTCCCCCTCCACATAGTCATCCGTCCCACCTCTTCCCCCAGCACG
TCATAATGCCTCCCGCCCCTCCCGGAGGCCTGAAAAGCGAAATGGACGAC
GACAAGGATATAATGGTAAGCGCCGGCAACGGCGGCGATGGGCACGGCAG
TCACGCCCACACCCACCCTAGCTCTAGTTCAAGCAGCATCAACACCACCA
TCACCAGCGATGGAGGGCCGCCCAACCAAGAGGACGGAAAGCTTTTCTTG
GGGTGTAAAAAGGAAGGGTGTAACGGCATTTTGCTGGTGGGAACGACGAC
GCGGCATGGGGCGCCGTACCAGTGTCCCCGGTGCTTGAACAAGCAGAAGT
ACTGTCAGGATTGTCAGCAGCTTTACATAAACTTTCGCCGTCATCGGATA
TTAGGCCATGAGTTGTATGAGTTCCAGCGGAAGCGACAGGTCCTCATACG
TAACAACCACGGTCTCTTCGTTCCTGCCGATCAGAGTAAAAAGGTCCCCG
TTACCATCACCGGCCCCGGCATTTTCAGCAGCGGCAGCAGCAGCAGCAG

protein sequence of jgi.p|Nanoce1779_2|626987

>mRNA_1685-protein ID=mRNA_1685-protein|Name=jgi.p|Nanoce1779_2|626987|organism=Nannochloropsis oceanica|type=polypeptide|length=906bp
MRQDDKNDEEDGFLSAGDSNSNPSSTTICAGTTSFPPKHISDLSFLFAAL
HQKCSVSGSIALAAIMMMNRWSLALGCPGGVPVAMMSRKAALQQQVSPSQ
TLRAEIEMELLGSDGAVSSEATSPFMYSIPLLRLSPKLAPTAGAGARVED
TPQLQQPRSRHFSDSRRYMDSRTFYARQNAEAFESIVPYGVTTNTFIVDA
YVRCILAYLEDVRHHYDDGRSSGNKGSDSTTLPTNTSKKKGSDDFDPISS
TRTSTTPDGNSQLKTKVYIIELAAGHCLFGYLLAKRLLQAQEEGVLPPSF
CSSICVLLTDFNKTLLENRMNTPWMQPLVAAGLIEFAVLDAASSSSQGIH
GKGGTKAQPLVLLGKEVTMLEPESLKGPVFVVGNYALDSFPVDIFMQTKT
QGLMEVREEEETGRLTLVSSSVGTLEEEGEGKAYPYHNILQALVGRGEEG
VLHVVNVGLIRLLERIRGLLHPHHKGDLALLLADGTFQYDDPTWRVQVVP
GEEIEGAQGEEEVENEDEKGKRQVQQQVQQQQQRQQREEQVPEGECAAVS
QDPHIQHLQLQYEHGRQHSKVKPSFRKRKRKLTISLPDMSPGPGSGCFAL
AMDPQAVVTAALWALGVKEEEGREGVGEGEKWLAVRNTVVEGSLTTTLFA
QVEDRKHEEEGGGEDWPLPCTREAFWRHVCLQNPTDFEHLQGLILEEHNR
DGYDSSGTESLLACLGLDGMLALLRWSGYDGDLFFALRWPLRNAILRCRR
LASADGHKTKIDVGADYKEVALRCLSNRMVLSTRAWNRTRYWGEQFLFAL
GCYRETVAFFLHDTSGCVGPISLSSASTLELWKDEYSGRFGSSAEAFLVT
MSLKNVVHTENAELTAHHVLVGVMEGQRFLDGKGRRRIENYLKRDQCLLR
RDKSN*

mRNA from alignment at scaffold_1:1230093..1237039+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1685 ID=mRNA_1685|Name=jgi.p|Nanoce1779_2|626987|organism=Nannochloropsis oceanica|type=mRNA|length=6947bp|location=Sequence derived from alignment at scaffold_1:1230093..1237039+ (Nannochloropsis oceanica)
CCCTGAATGTGGGGTCGACGAAGGCGATTTTAACCTCCCCTCCCTTGCCC
TTCCCCATCCCCACCCCCTCCCACACGTCGCCTCTCCTCCAAGACAAGAA
GGGATGCGGCAAGACGATAAAAACGACGAAGAGGATGGCTTTCTATCAGC
CGGCGACAGCAATTCCAACCCCTCCTCCACGACTATCTGCGCCGGGACCA
CAAGTTTCCCTCCAAAACACATCAGCGACCTCTCCTTCCTCTTTGCAGCA
CTCCATCAGAAATGCAGCGTGAGCGGGTCGATCGCGTTGGCAGCAATTAT
GATGATGAATCGATGGAGCCTTGCCTTAGGTTGTCCAGGCGGAGTACCCG
TAGCCATGATGTCCCGCAAGGCTGCGCTTCAGCAGCAAGTGTCACCCTCC
CAAACGCTACGTGCCGAGATTGAGATGGAACTACTGGGAAGCGACGGTGC
TGTGAGTTCAGAGGCTACGTCACCGTTTATGTACAGTATTCCCTTGCTTC
GTCTTTCCCCAAAATTAGCACCGACAGCAGGAGCAGGAGCTCGTGTGGAA
GACACACCACAACTACAACAACCACGCTCAAGGCACTTCTCCGACTCCCG
GCGCTACATGGATTCTCGAACTTTTTACGCGCGGCAGAACGCTGAAGCAT
TCGAGTCCATTGTGCCTTATGGCGTCACCACCAACACTTTTATTGTTGAT
GCCTATGTCCGCTGCATTCTGGCCTATCTTGAGGATGTCCGACACCACTA
CGATGACGGAAGGAGTAGCGGCAACAAAGGCAGCGACAGCACCACCCTTC
CCACCAACACCAGCAAGAAGAAGGGCAGTGATGACTTCGACCCAATTTCC
TCGACCAGGACTAGCACAACACCTGACGGCAACAGTCAATTAAAGACAAA
AGTGTACATCATTGAGCTCGCCGCTGGGCATTGCCTTTTCGGTTATTTAC
TGGCCAAGCGTCTGTTGCAAGCACAAGAGGAGGGCGTGCTGCCCCCCTCC
TTCTGCTCATCCATCTGTGTTTTGTTGACAGATTTCAACAAAACACTACT
TGAAAACCGCATGAATACTCCTTGGATGCAGCCTTTGGTAGCCGCGGGGC
TGATCGAATTTGCGGTGCTTGACGCCGCATCCTCTTCCTCTCAAGGCATT
CATGGAAAAGGAGGTACCAAGGCACAACCATTAGTGCTGCTGGGAAAGGA
AGTGACTATGTTGGAGCCGGAAAGTTTGAAAGGCCCTGTCTTTGTGGTGG
GCAATTATGCTTTGGATTCGTTCCCGGTCGATATTTTTATGCAGACCAAG
ACGCAGGGATTGATGGAGGTGAGGGAGGAGGAGGAAACTGGGCGTTTGAC
GCTTGTCTCATCCTCGGTAGGAACACTGGAGGAAGAAGGGGAAGGGAAGG
CATACCCTTACCACAACATTCTCCAGGCATTGGTCGGACGAGGAGAGGAG
GGAGTGCTGCATGTTGTGAACGTCGGGCTTATTCGCCTTCTAGAACGCAT
TCGCGGCTTGCTCCATCCCCATCACAAGGGCGACCTGGCTTTGCTTCTGG
CTGATGGGACATTCCAGTACGATGACCCTACATGGAGGGTACAAGTCGTA
CCTGGAGAGGAGATCGAGGGAGCGCAGGGGGAGGAGGAGGTGGAGAACGA
GGACGAGAAGGGCAAGCGACAGGTACAGCAGCAGGTACAGCAGCAGCAGC
AGCGACAGCAGCGGGAGGAGCAAGTGCCAGAAGGAGAGTGTGCGGCCGTC
AGCCAGGACCCGCACATACAGCACCTTCAGCTTCAATACGAGCATGGCCG
GCAGCATTCAAAAGTCAAACCCAGTTTCCGAAAACGGAAGCGAAAGCTGA
CCATTTCACTTCCTGACATGAGTCCTGGGCCTGGTAGCGGATGTTTTGCG
CTCGCCATGGACCCTCAGGCCGTGGTCACGGCGGCATTGTGGGCGCTGGG
GGTGAAAGAGGAGGAGGGCAGGGAGGGAGTGGGTGAGGGAGAAAAATGGC
TAGCGGTGCGCAACACGGTGGTGGAAGGGAGCCTGACGACGACCCTCTTT
GCGCAAGTGGAAGATAGAAAACATGAGGAAGAAGGAGGAGGGGAAGATTG
GCCATTGCCGTGCACGAGAGAAGCCTTTTGGAGGCATGTGTGCTTGCAGA
ACCCCACGGATTTTGAGCACTTGCAAGGCCTTATTTTAGAGGAGCACAAT
CGAGACGGCTATGATAGTAGTGGTACTGAAAGCCTCCTGGCTTGTCTGGG
CTTGGATGGGATGCTGGCCTTGCTGCGATGGTCTGGTTATGATGGAGATT
TGTTCTTTGCCCTTCGATGGCCGCTCCGTAATGCGATACTGCGTTGTCGT
CGTCTTGCTAGTGCAGATGGTCATAAAACAAAAATAGACGTGGGTGCAGA
CTACAAGGAGGTAGCGCTCCGTTGCCTTTCAAATCGGATGGTGTTGAGCA
CCAGGGCATGGAATCGGACGCGGTATTGGGGTGAACAGTTTCTATTCGCT
TTGGGCTGCTACCGCGAGACGGTGGCTTTCTTTTTGCATGACACTTCTGG
ATGTGTTGGTCCCATCTCCTTGTCGTCCGCTTCTACCCTTGAATTGTGGA
AAGACGAATACTCTGGAAGATTTGGAAGTTCAGCCGAGGCATTTTTGGTG
ACAATGAGCCTTAAAAACGTCGTTCACACTGAAAATGCGGAATTGACAGC
ACATCATGTTTTGGTGGGAGTGATGGAGGGACAGAGATTTCTGGATGGCA
AAGGACGGCGACGCATCGAGAACTACTTGAAAAGGGACCAGTGTTTACTT
CGTAGAGACAAGAGCAATTAAAGGGTAACAACCCGCCAACAAGACAAGTC
CTAATGGCCCATATGGGAAGTAAAGAGCATTCTTTCTCTCTTTAGTGTTG
CCCTGGCTGCCCAGCGCACTCTGCAGGACGTTCGTCCACGGTTGCTCACA
ATAAAATGTAGGTAACAGACCTTTTCATTTCATAGCGACAATACGCACCT
CTCCGCGTGCGCACATTTGGCAAAATATGGATCGTAGTGTTCGCCTGTTG
CATCTTCAGGGTGACAAGAGCAGTGGACTTTGCGTGGGAAAAAACAGAAA
AGTGGCACGTTTCCGGGGAAAGCGTCACCAATTTGACTTCACAGTCAACC
ACAACAAGCGATGCGGCGTCGATGCAGCGTGCCTTTGACCCTTCAAGCTT
TTGTTAACATTGTTGAGTCTGGCTGTATGCCTTATACGAGAGTTGGTTAC
GGGCAACGAGAAGCCCCTCTGTCGTGGCCTGGCCGCCAGCTTGGACATTC
GCTCGCCCTACTCGAGCCCATGGGCTTTTCTTCCGACCAAGTCTTTATTC
TCCATGCCTATGCCTTGTCTGTCCTTTTCCGATGCACGTAATTTCCATTC
CGCGTCTCATGTATCTGTAAGTCTCAGAGTCCCTTTGGACCCCTGTGTGG
TTCTGTGTGTGGCATTTTTCGCCCCTTTTCTCTGCATCAGCGAACCAGAA
CAAGAACACGGGCCAGAGGAACGCGCCGTGGGAGGACGGTCACCCCTCAC
CTCTTTTTGCTTGGTCAGGAGGATAAGACACTCGACAGCAGCACAAGCCA
TCTTCTCGAGGTCGCAACCTGGTCGACGTGGGCTGGTGTCCACTCCCCTC
TCACTCACACTACATTTGAGCCCTTTTTAATCCCTCGGGGATCGACAAGG
TTTCAACTGGGCAGTGGCACTGGTGTCCGTGGTACCGTGGACAATTCACA
GGCCCTGCAGCCACGCAGGGGCGAGGGGGAAGGGTGTAACACTGCTTTGC
ATGCACCCCGATCGGCTTTCTTGTGATGCGAACCCGGCTGCCAGCTTCAG
CACAGCCAAGAAAAGGGCGCCGCGCCCCTTTGACAACGCACATACAGAGT
GATGCGGCGGGTCTGGACACCCACAGCTCCTTCGTCCCCTTTCTCTGACA
CTGACACGCCCTCCCACCCCCACGCACAGAAAGAGGCAGCCACCACCGCA
CAACAAGCAGTGTCCTAGTTCGGTGAAGCTTGGAAGCGTCGCCTCGGCAT
CACCACCTCATCCAAAACAACCGACACAACCCATCCCAGGCCCACGCCTC
CGAGACATCTACTTTGAATTAACATGTCGCTCGACGCGGCCGAGTCCATG
GAGACGCGAGGGGATCCCGCCCACCAGCGCCAACAAGAGCTCGAACAACA
GCAGCAGCTCCACTACGGACATACGGACCACCCTCCCCCCCCCTTGCCTC
CCCCGCCCCCTTTCCCTCGCTCCGACCCGCATCATCACCACCTCCATCCT
CACGGCCCTCCTCCGCCTTTTGGCTATGCAGTCTCCCTGGGGGTCCATGC
CCCTCCTCCCCCTCCACATAGTCATCCGTCCCACCTCTTCCCCCAGCACG
TCATAATGCCTCCCGCCCCTCCCGGAGGCCTGAAAAGCGAAATGGACGAC
GACAAGGATATAATGGTAAGCGCCGGCAACGGCGGCGATGGGCACGGCAG
TCACGCCCACACCCACCCTAGCTCTAGTTCAAGCAGCATCAACACCACCA
TCACCAGCGATGGAGGGCCGCCCAACCAAGAGGACGGAAAGCTTTTCTTG
GGGTGTAAAAAGGAAGGGTGTAACGGCATTTTGCTGGTGGGAACGACGAC
GCGGCATGGGGCGCCGTACCAGTGTCCCCGGTGCTTGAACAAGCAGAAGT
ACTGTCAGGATTGTCAGCAGCTTTACATAAACTTTCGCCGTCATCGGATA
TTAGGCCATGAGTTGTATGAGTTCCAGCGGAAGCGACAGGTGCGTGGGGA
CAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGTATGTGGTT
GGTTTGTTTTGGGAATAGGTGCGTTCGGAAGCTTGTCATTTTTTGGGGGG
GTTGATTGGAGTGCGTTCCCTCTGTGTACAGTGCTCGGGTTGGGCCGGGG
GAAAAGGCATCTGGGGCAGGTCTTTCCCCTCCTCCATGGTCGAGGTTGAG
GAGTAAGAATCCTGGCTCACGTCCTTTGTATGTGTGTCACCCTGTCATCC
ACCCTCTTTTAATCACGGTAGGGTTACAGATTTGTCTGTCTGTCTGTCTG
TCTGTCTGTCTGTGTGTCTGTCTGTCTGTCTGTCCTGCATCCTGTTTTTT
AATCACGGTTGGTCTGGGGTCGAATCTGTCGACACGTTTGTCGTTTTAAA
ACATGTCGTTTGAAAAGGCGGTTTGGAGAAAGGAGAGCAATGATTAACAG
TGCGGTGACACGGTCGTGGGCAGAGCAGCACCAGCAGAAGAATGTCCTTC
GCTGCCCTGACTCTGGTTCACGATTGCATGGATTAAATGCAGATGAAGAG
GAGGAGAGGGAAGAGAAGGAGGGGGGGGAGGAGGTGGAGGAAAAGGAGAA
GGGCGTCCTCGGAAGAGTAACCCCCCCCTCTCCCTCCCCCCTCCTCCTCC
TCCTCCCCCTACTGCTCTTCTCTTCTCCTGCAATCAGACTGTGTCAACCT
GCCTTCAAAGCTCTGTCTCTCTCCTCTCCGTCTTTCTCATCTCTCCCACT
TTCTCTCTCCTTCCTCCTCCTCTCCCTCTCCCTCTCTCCCTCTCCCTCTC
TCTCCTTTTGTCGTCTCGCTTCGGTGTGCTCGATGAATCCCCTCTGTGAC
ATAGGTCCTCATACGTAACAACCACGGTCTCTTCGTTCCTGCCGATCAGA
GTAAAAAGGTCCCCGTTACCATCACCGGCCCCGGCATTTTCAGCAGCGGC
AGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACAG
CATTTCCGTCAGCAGCACCAGCGCAGGTTCAACGTCTTCCCTCCTGGGAG
GGGGAGGACGCCAATCCCAGAAGCAGAAGCAGGCGGCGGCGGCTGCTGCT
GCGGCTGCTGGCGTTGAGATGGGGGGACGACGAGTAAGAGGGGATGGGCG
CTCCCGGCGTCCGACTAAGGGTCGAGGTAAGGGACATGATGAAATTAGCC
TTGAGGAGGAGGAGGAAGAGGAAGGGAATGAGGAAGGGGAGAGGATGAAA
GAGGAAGGGGAGATGATGATTTATGCGCCGGCGGGCGCGGTGTGGACTGG
AGGAAGGGAAGGAGGTAGAGGGGGGGTTCCTCCTACCCCTGAGGTGGCTG
AGGAGTTGGATGACGCGTCAGATATTTTGGTCAAGCTGATGCAGGGACAA
AGCAGTAGCAATAAGCGCAGCAAGACGGGCGAACTCACATCTCCAGGTGG
AGGGATGAACAAGCCGCCGCTGCCAAAGCAGCAGCAGCAGCAACAACAAC
GACAACAACAACCTGTGTGCCAGCAACAGAAGCAGCAGCAGTTGCAGCAG
ATGGAGACAGAAACAGGTGCAGCAGCAGCCGCAACAGGGGCTATTGCATC
CATGTCATCCGCCGCCGGCCATGTCTCTTCTCCAGGCCAAGCCCAGCCCA
TCGAGCCCATGTCCCCCGACGGCCCGAATTCCTCTGCACTGCCCCCCTCC
TCCTCTGTTTCCAATGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGC
CGCTGCTTTCTCCCCCCCTCCTTCCTTGCAGCCACCCGCCGCGTGGTCCT
CGTCCAACTTCCTTGCTTCCTTCAAGCCTCCCACCCTACTCCCTGCAAAC
GCGAGTCAGATGCAGCGTCAGCAGCCACGCTGGGTGAGTGGCGATGCTGC
CTCCTTCCTTCCCCCCCCCTTCTCCTTTAGTTCCAAGACCATGCGCGAAA
ACGACCCAGTGGCTCCACTAGAGATCCCTCCTTCCCTTCCTCCCTTGCCT
ACCCTCGTGGGGAAGGATTTTGGGCCGCCCTCTACAGCAGCTGCAGCGGC
AGCAGGGACGGAGCGGGACGCAGGGACGCAGACGTCGCCTTCGGGCTCTT
CTCCTCCCCCCCCCCCTCCTCCTCCTCCTGAGCAGCAGCAGCAGCAG

Coding sequence (CDS) from alignment at scaffold_1:1230093..1237039+

>mRNA_1685 ID=mRNA_1685|Name=jgi.p|Nanoce1779_2|626987|organism=Nannochloropsis oceanica|type=CDS|length=2718bp|location=Sequence derived from alignment at scaffold_1:1230093..1237039+ (Nannochloropsis oceanica)
ATGCGGCAAGACGATAAAAACGACGAAGAGGATGGCTTTCTATCAGCCGG
CGACAGCAATTCCAACCCCTCCTCCACGACTATCTGCGCCGGGACCACAA
GTTTCCCTCCAAAACACATCAGCGACCTCTCCTTCCTCTTTGCAGCACTC
CATCAGAAATGCAGCGTGAGCGGGTCGATCGCGTTGGCAGCAATTATGAT
GATGAATCGATGGAGCCTTGCCTTAGGTTGTCCAGGCGGAGTACCCGTAG
CCATGATGTCCCGCAAGGCTGCGCTTCAGCAGCAAGTGTCACCCTCCCAA
ACGCTACGTGCCGAGATTGAGATGGAACTACTGGGAAGCGACGGTGCTGT
GAGTTCAGAGGCTACGTCACCGTTTATGTACAGTATTCCCTTGCTTCGTC
TTTCCCCAAAATTAGCACCGACAGCAGGAGCAGGAGCTCGTGTGGAAGAC
ACACCACAACTACAACAACCACGCTCAAGGCACTTCTCCGACTCCCGGCG
CTACATGGATTCTCGAACTTTTTACGCGCGGCAGAACGCTGAAGCATTCG
AGTCCATTGTGCCTTATGGCGTCACCACCAACACTTTTATTGTTGATGCC
TATGTCCGCTGCATTCTGGCCTATCTTGAGGATGTCCGACACCACTACGA
TGACGGAAGGAGTAGCGGCAACAAAGGCAGCGACAGCACCACCCTTCCCA
CCAACACCAGCAAGAAGAAGGGCAGTGATGACTTCGACCCAATTTCCTCG
ACCAGGACTAGCACAACACCTGACGGCAACAGTCAATTAAAGACAAAAGT
GTACATCATTGAGCTCGCCGCTGGGCATTGCCTTTTCGGTTATTTACTGG
CCAAGCGTCTGTTGCAAGCACAAGAGGAGGGCGTGCTGCCCCCCTCCTTC
TGCTCATCCATCTGTGTTTTGTTGACAGATTTCAACAAAACACTACTTGA
AAACCGCATGAATACTCCTTGGATGCAGCCTTTGGTAGCCGCGGGGCTGA
TCGAATTTGCGGTGCTTGACGCCGCATCCTCTTCCTCTCAAGGCATTCAT
GGAAAAGGAGGTACCAAGGCACAACCATTAGTGCTGCTGGGAAAGGAAGT
GACTATGTTGGAGCCGGAAAGTTTGAAAGGCCCTGTCTTTGTGGTGGGCA
ATTATGCTTTGGATTCGTTCCCGGTCGATATTTTTATGCAGACCAAGACG
CAGGGATTGATGGAGGTGAGGGAGGAGGAGGAAACTGGGCGTTTGACGCT
TGTCTCATCCTCGGTAGGAACACTGGAGGAAGAAGGGGAAGGGAAGGCAT
ACCCTTACCACAACATTCTCCAGGCATTGGTCGGACGAGGAGAGGAGGGA
GTGCTGCATGTTGTGAACGTCGGGCTTATTCGCCTTCTAGAACGCATTCG
CGGCTTGCTCCATCCCCATCACAAGGGCGACCTGGCTTTGCTTCTGGCTG
ATGGGACATTCCAGTACGATGACCCTACATGGAGGGTACAAGTCGTACCT
GGAGAGGAGATCGAGGGAGCGCAGGGGGAGGAGGAGGTGGAGAACGAGGA
CGAGAAGGGCAAGCGACAGGTACAGCAGCAGGTACAGCAGCAGCAGCAGC
GACAGCAGCGGGAGGAGCAAGTGCCAGAAGGAGAGTGTGCGGCCGTCAGC
CAGGACCCGCACATACAGCACCTTCAGCTTCAATACGAGCATGGCCGGCA
GCATTCAAAAGTCAAACCCAGTTTCCGAAAACGGAAGCGAAAGCTGACCA
TTTCACTTCCTGACATGAGTCCTGGGCCTGGTAGCGGATGTTTTGCGCTC
GCCATGGACCCTCAGGCCGTGGTCACGGCGGCATTGTGGGCGCTGGGGGT
GAAAGAGGAGGAGGGCAGGGAGGGAGTGGGTGAGGGAGAAAAATGGCTAG
CGGTGCGCAACACGGTGGTGGAAGGGAGCCTGACGACGACCCTCTTTGCG
CAAGTGGAAGATAGAAAACATGAGGAAGAAGGAGGAGGGGAAGATTGGCC
ATTGCCGTGCACGAGAGAAGCCTTTTGGAGGCATGTGTGCTTGCAGAACC
CCACGGATTTTGAGCACTTGCAAGGCCTTATTTTAGAGGAGCACAATCGA
GACGGCTATGATAGTAGTGGTACTGAAAGCCTCCTGGCTTGTCTGGGCTT
GGATGGGATGCTGGCCTTGCTGCGATGGTCTGGTTATGATGGAGATTTGT
TCTTTGCCCTTCGATGGCCGCTCCGTAATGCGATACTGCGTTGTCGTCGT
CTTGCTAGTGCAGATGGTCATAAAACAAAAATAGACGTGGGTGCAGACTA
CAAGGAGGTAGCGCTCCGTTGCCTTTCAAATCGGATGGTGTTGAGCACCA
GGGCATGGAATCGGACGCGGTATTGGGGTGAACAGTTTCTATTCGCTTTG
GGCTGCTACCGCGAGACGGTGGCTTTCTTTTTGCATGACACTTCTGGATG
TGTTGGTCCCATCTCCTTGTCGTCCGCTTCTACCCTTGAATTGTGGAAAG
ACGAATACTCTGGAAGATTTGGAAGTTCAGCCGAGGCATTTTTGGTGACA
ATGAGCCTTAAAAACGTCGTTCACACTGAAAATGCGGAATTGACAGCACA
TCATGTTTTGGTGGGAGTGATGGAGGGACAGAGATTTCTGGATGGCAAAG
GACGGCGACGCATCGAGAACTACTTGAAAAGGGACCAGTGTTTACTTCGT
AGAGACAAGAGCAATTAA

Synonyms

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